RNA–Protein interactions for RNA: ENST00000569376.5

TNRC6A-217, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 610 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-217ENST00000569376 FOSL2P15408 326 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 PPP2R1AP30153 589 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 GRK4P32298 578 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 MRE11P49959 708 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 CAP1Q01518 475 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 TAF7Q15545 349 aaPredicted RBP6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 LDLRAD1Q5T700 205 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 NBPF10Q6P3W6 841 aaKnown RBP6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 NECAB2Q7Z6G3 386 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 RAET1EQ8TD07 263 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 ATXN2LQ8WWM7 1075 aaKnown RBP6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 DDRGK1Q96HY6 314 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 WNK4Q96J92 1243 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 CFAP53Q96M91 514 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 LRFN3Q9BTN0 628 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 SEMA6BQ9H3T3 888 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 DBNDD1Q9H9R9 158 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 CACNA1AO00555 2505 aa6.68□□□□□ -1.34
TNRC6A-217ENST00000569376 RANBP2P49792 3224 aaKnown RBP6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 UNCXA6NJT0 531 aa6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 APBB1O00213 710 aa6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 VIL1P09327 827 aaKnown RBP6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 SYN1P17600 705 aa6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 ZNF280AP59817 542 aaPredicted RBP6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 TAF1CQ15572 869 aaPredicted RBP6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 TRMT44Q8IYL2 757 aaKnown RBP6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 PROCA1Q8NCQ7 364 aaPredicted RBP6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 AGBL3Q8NEM8 1001 aa6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 ADAMTS19Q8TE59 1207 aa6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 LRRN4Q8WUT4 740 aa6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 MYLIPQ8WY64 445 aa6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 UHRF1Q96T88 793 aaPredicted RBP6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 FAM205AQ6ZU69 1335 aa6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 TTC28Q96AY4 2481 aa6.67□□□□□ -1.34
TNRC6A-217ENST00000569376 PPP1R12BO60237 982 aaPredicted RBP6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 ECE2O60344 883 aa6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 U2AF1L5P0DN76 240 aaPredicted RBP6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 U2AF1Q01081 240 aaKnown RBP eCLIP6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 TMEM31Q5JXX7 168 aa6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 PPP2R2DQ66LE6 453 aa6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 MCM10Q7L590 875 aa6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 GPKOWQ92917 476 aaPredicted RBP eCLIP6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 PAWRQ96IZ0 340 aaKnown RBP6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 EYA3Q99504 573 aa6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 MYOZ2Q9NPC6 264 aa6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 DNMT3LQ9UJW3 386 aa6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 SCAF8Q9UPN6 1271 aaKnown RBP6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 RIPOR2Q9Y4F9 1068 aa6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 SIPA1L3O60292 1781 aaPredicted RBP6.66□□□□□ -1.34
TNRC6A-217ENST00000569376 ERVV-1B6SEH8 477 aa6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 RNF225M0QZC1 329 aaPredicted RBP6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 USP17L8P0C7I0 530 aa6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 FSHRP23945 695 aa6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 PIP4K2AP48426 406 aaPredicted RBP6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 GSK3AP49840 483 aa6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 LACTBP83111 547 aaPredicted RBP6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 CNGB1Q14028 1251 aaPredicted RBP6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 DCTN1Q14203 1278 aa6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 SUZ12Q15022 739 aaKnown RBP6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 VASH1Q7L8A9 365 aaPredicted RBP6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 TMC4Q7Z404 712 aa6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 RTF1Q92541 710 aaKnown RBP6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 ASB2Q96Q27 587 aa6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 PLEKHF1Q96S99 279 aa6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 PTPN18Q99952 460 aa6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 KCNQ5Q9NR82 932 aa6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 SRRDQ9UH36 339 aa6.65□□□□□ -1.34
TNRC6A-217ENST00000569376 RIC1Q4ADV7 1423 aa6.65□□□□□ -1.35
TNRC6A-217ENST00000569376 CENPFP49454 3210 aa6.65□□□□□ -1.35
TNRC6A-217ENST00000569376 ALPK3Q96L96 1907 aa6.64□□□□□ -1.35
TNRC6A-217ENST00000569376 BRCA2P51587 3418 aa6.64□□□□□ -1.35
TNRC6A-217ENST00000569376 MAGEB6P1A0A0J9YX57 407 aa6.64□□□□□ -1.35
TNRC6A-217ENST00000569376 EIF4A1P60842 406 aaKnown RBP6.64□□□□□ -1.35
TNRC6A-217ENST00000569376 MRPS5P82675 430 aaKnown RBP6.64□□□□□ -1.35
TNRC6A-217ENST00000569376 HLFQ16534 295 aa6.64□□□□□ -1.35
TNRC6A-217ENST00000569376 DDX46Q7L014 1031 aaKnown RBP6.64□□□□□ -1.35
TNRC6A-217ENST00000569376 PPP1R42Q7Z4L9 355 aa6.64□□□□□ -1.35
TNRC6A-217ENST00000569376 SLC51AQ86UW1 340 aa6.64□□□□□ -1.35
TNRC6A-217ENST00000569376 CCDC116Q8IYX3 515 aa6.64□□□□□ -1.35
TNRC6A-217ENST00000569376 TMEM151AQ8N4L1 468 aa6.64□□□□□ -1.35
TNRC6A-217ENST00000569376 NANOS1Q8WY41 292 aaKnown RBP6.64□□□□□ -1.35
TNRC6A-217ENST00000569376 MIS18AQ9NYP9 233 aa6.64□□□□□ -1.35
TNRC6A-217ENST00000569376 NSFL1CQ9UNZ2 370 aaKnown RBP6.64□□□□□ -1.35
TNRC6A-217ENST00000569376 TTLL8A6PVC2 850 aa6.63□□□□□ -1.35
TNRC6A-217ENST00000569376 ABCC4O15439 1325 aa6.63□□□□□ -1.35
TNRC6A-217ENST00000569376 TLR2O60603 784 aa6.63□□□□□ -1.35
TNRC6A-217ENST00000569376 VCANP13611 3396 aa6.63□□□□□ -1.35
TNRC6A-217ENST00000569376 PSMC4P43686 418 aa6.63□□□□□ -1.35
TNRC6A-217ENST00000569376 MAP3K11Q16584 847 aa6.63□□□□□ -1.35
TNRC6A-217ENST00000569376 OGFOD1Q8N543 542 aa6.63□□□□□ -1.35
TNRC6A-217ENST00000569376 KCTD17Q8N5Z5 321 aa6.63□□□□□ -1.35
TNRC6A-217ENST00000569376 PNISRQ8TF01 805 aaKnown RBP6.63□□□□□ -1.35
TNRC6A-217ENST00000569376 PIEZO1Q92508 2521 aa6.63□□□□□ -1.35
TNRC6A-217ENST00000569376 ABCC12Q96J65 1359 aa6.63□□□□□ -1.35
TNRC6A-217ENST00000569376 DEFB118Q96PH6 123 aa6.63□□□□□ -1.35
TNRC6A-217ENST00000569376 LBHD1Q9BQE6 289 aaPredicted RBP6.63□□□□□ -1.35
TNRC6A-217ENST00000569376 ZC3H12CQ9C0D7 883 aaKnown RBP6.63□□□□□ -1.35
TNRC6A-217ENST00000569376 ARHGAP39Q9C0H5 1083 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms