RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 HSP90AB2PQ58FF8 381 aa10.47□□□□□ -0.73
CCDC113-205ENST00000569374 NBPF6Q5VWK0 638 aa10.47□□□□□ -0.73
CCDC113-205ENST00000569374 NXPE4Q6UWF7 544 aa10.47□□□□□ -0.73
CCDC113-205ENST00000569374 VPS37DQ86XT2 251 aa10.47□□□□□ -0.73
CCDC113-205ENST00000569374 NBPF4Q96M43 638 aa10.47□□□□□ -0.73
CCDC113-205ENST00000569374 EFCC1Q9HA90 598 aa10.47□□□□□ -0.73
CCDC113-205ENST00000569374 RTL1A6NKG5 1358 aa10.47□□□□□ -0.73
CCDC113-205ENST00000569374 POLR3DP05423 398 aaPredicted RBP10.46□□□□□ -0.73
CCDC113-205ENST00000569374 ATP2B1P20020 1258 aa10.46□□□□□ -0.73
CCDC113-205ENST00000569374 GRNP28799 593 aaKnown RBP10.46□□□□□ -0.73
CCDC113-205ENST00000569374 LAMC2Q13753 1193 aa10.46□□□□□ -0.73
CCDC113-205ENST00000569374 ZFP42Q96MM3 310 aa10.46□□□□□ -0.73
CCDC113-205ENST00000569374 CNTN3Q9P232 1028 aa10.46□□□□□ -0.73
CCDC113-205ENST00000569374 PRKAG2Q9UGJ0 569 aa10.46□□□□□ -0.73
CCDC113-205ENST00000569374 COL24A1Q17RW2 1714 aa10.46□□□□□ -0.74
CCDC113-205ENST00000569374 ATXN7O15265 892 aaPredicted RBP10.45□□□□□ -0.74
CCDC113-205ENST00000569374 ANP32CO43423 234 aa10.45□□□□□ -0.74
CCDC113-205ENST00000569374 MAN1A2O60476 641 aa10.45□□□□□ -0.74
CCDC113-205ENST00000569374 AMPHP49418 695 aa10.45□□□□□ -0.74
CCDC113-205ENST00000569374 VEGFBP49765 207 aa10.45□□□□□ -0.74
CCDC113-205ENST00000569374 ZNF827Q17R98 1081 aa10.45□□□□□ -0.74
CCDC113-205ENST00000569374 KIAA0319Q5VV43 1072 aa10.45□□□□□ -0.74
CCDC113-205ENST00000569374 ARMC5Q96C12 935 aa10.45□□□□□ -0.74
CCDC113-205ENST00000569374 PNMA5Q96PV4 448 aa10.45□□□□□ -0.74
CCDC113-205ENST00000569374 EHD4Q9H223 541 aa10.45□□□□□ -0.74
CCDC113-205ENST00000569374 PCDHGC4Q9Y5F7 938 aa10.45□□□□□ -0.74
CCDC113-205ENST00000569374 NCAPD2Q15021 1401 aa10.44□□□□□ -0.74
CCDC113-205ENST00000569374 H7C1W4 665 aa10.44□□□□□ -0.74
CCDC113-205ENST00000569374 EXOC5O00471 708 aa10.44□□□□□ -0.74
CCDC113-205ENST00000569374 DGAT1O75907 488 aa10.44□□□□□ -0.74
CCDC113-205ENST00000569374 XRCC5P13010 732 aaKnown RBP10.44□□□□□ -0.74
CCDC113-205ENST00000569374 ARID5AQ03989 594 aa10.44□□□□□ -0.74
CCDC113-205ENST00000569374 GRM2Q14416 872 aa10.44□□□□□ -0.74
CCDC113-205ENST00000569374 PKDCCQ504Y2 493 aa10.44□□□□□ -0.74
CCDC113-205ENST00000569374 ZNF394Q53GI3 561 aa10.44□□□□□ -0.74
CCDC113-205ENST00000569374 MEI1Q5TIA1 1274 aa10.44□□□□□ -0.74
CCDC113-205ENST00000569374 TRIM46Q7Z4K8 759 aa10.44□□□□□ -0.74
CCDC113-205ENST00000569374 NOC4LQ9BVI4 516 aaKnown RBP10.44□□□□□ -0.74
CCDC113-205ENST00000569374 ZCCHC2Q9C0B9 1178 aaKnown RBP10.44□□□□□ -0.74
CCDC113-205ENST00000569374 ZFYVE1Q9HBF4 777 aa10.44□□□□□ -0.74
CCDC113-205ENST00000569374 LRRC4BQ9NT99 713 aa10.44□□□□□ -0.74
CCDC113-205ENST00000569374 DNMT3LQ9UJW3 386 aa10.44□□□□□ -0.74
CCDC113-205ENST00000569374 FLT4P35916 1363 aa10.43□□□□□ -0.74
CCDC113-205ENST00000569374 POTECB2RU33 542 aa10.43□□□□□ -0.74
CCDC113-205ENST00000569374 AXIN1O15169 862 aa10.43□□□□□ -0.74
CCDC113-205ENST00000569374 SASH3O75995 380 aa10.43□□□□□ -0.74
CCDC113-205ENST00000569374 TNNT2P45379 298 aaPredicted RBP10.43□□□□□ -0.74
CCDC113-205ENST00000569374 PWP1Q13610 501 aa10.43□□□□□ -0.74
CCDC113-205ENST00000569374 TXNRD1Q16881 649 aa10.43□□□□□ -0.74
CCDC113-205ENST00000569374 DDX54Q8TDD1 881 aaKnown RBP10.43□□□□□ -0.74
CCDC113-205ENST00000569374 UBR3Q6ZT12 1888 aa10.42□□□□□ -0.74
CCDC113-205ENST00000569374 INSRP06213 1382 aa10.42□□□□□ -0.74
CCDC113-205ENST00000569374 RARAP10276 462 aa10.42□□□□□ -0.74
CCDC113-205ENST00000569374 RIPOR1Q6ZS17 1223 aa10.42□□□□□ -0.74
CCDC113-205ENST00000569374 OR13H1Q8NG92 308 aa10.42□□□□□ -0.74
CCDC113-205ENST00000569374 GMLQ99445 158 aa10.42□□□□□ -0.74
CCDC113-205ENST00000569374 PPM1HQ9ULR3 514 aa10.42□□□□□ -0.74
CCDC113-205ENST00000569374 TTF2Q9UNY4 1162 aaKnown RBP10.42□□□□□ -0.74
CCDC113-205ENST00000569374 PCDHGB7Q9Y5F8 929 aa10.42□□□□□ -0.74
CCDC113-205ENST00000569374 SMG6Q86US8 1419 aaKnown RBP10.41□□□□□ -0.74
CCDC113-205ENST00000569374 KHNYNO15037 678 aaKnown RBP10.41□□□□□ -0.74
CCDC113-205ENST00000569374 PLSCR1O15162 318 aa10.41□□□□□ -0.74
CCDC113-205ENST00000569374 ZBTB7AO95365 584 aa10.41□□□□□ -0.74
CCDC113-205ENST00000569374 PSAPP07602 524 aa10.41□□□□□ -0.74
CCDC113-205ENST00000569374 RLBP1P12271 317 aa10.41□□□□□ -0.74
CCDC113-205ENST00000569374 CANXP27824 592 aaKnown RBP10.41□□□□□ -0.74
CCDC113-205ENST00000569374 DNAJA1P31689 397 aaKnown RBP10.41□□□□□ -0.74
CCDC113-205ENST00000569374 CRIPAKQ8N1N5 446 aa10.41□□□□□ -0.74
CCDC113-205ENST00000569374 GSX2Q9BZM3 304 aa10.41□□□□□ -0.74
CCDC113-205ENST00000569374 SRA1Q9HD15 236 aaKnown RBP10.41□□□□□ -0.74
CCDC113-205ENST00000569374 PPM1GO15355 546 aaPredicted RBP10.4□□□□□ -0.74
CCDC113-205ENST00000569374 EFSO43281 561 aa10.4□□□□□ -0.74
CCDC113-205ENST00000569374 SOX18P35713 384 aa10.4□□□□□ -0.74
CCDC113-205ENST00000569374 TNNI2P48788 182 aa10.4□□□□□ -0.74
CCDC113-205ENST00000569374 RACK1P63244 317 aaKnown RBP10.4□□□□□ -0.74
CCDC113-205ENST00000569374 KRT25Q7Z3Z0 450 aa10.4□□□□□ -0.74
CCDC113-205ENST00000569374 NUCKS1Q9H1E3 243 aaKnown RBP10.4□□□□□ -0.74
CCDC113-205ENST00000569374 KIF7Q2M1P5 1343 aa10.39□□□□□ -0.75
CCDC113-205ENST00000569374 C4BP0C0L5 1744 aa10.39□□□□□ -0.75
CCDC113-205ENST00000569374 COL5A3P25940 1745 aaPredicted RBP10.39□□□□□ -0.75
CCDC113-205ENST00000569374 A0A1W2PP55 124 aa10.39□□□□□ -0.75
CCDC113-205ENST00000569374 CYP27B1O15528 508 aa10.39□□□□□ -0.75
CCDC113-205ENST00000569374 MMP20O60882 483 aa10.39□□□□□ -0.75
CCDC113-205ENST00000569374 TARSP26639 723 aaKnown RBP10.39□□□□□ -0.75
CCDC113-205ENST00000569374 SFSWAPQ12872 951 aaKnown RBP10.39□□□□□ -0.75
CCDC113-205ENST00000569374 DDX10Q13206 875 aaKnown RBP10.39□□□□□ -0.75
CCDC113-205ENST00000569374 PRPF40BQ6NWY9 871 aaKnown RBP10.39□□□□□ -0.75
CCDC113-205ENST00000569374 ERMP1Q7Z2K6 904 aa10.39□□□□□ -0.75
CCDC113-205ENST00000569374 NCAPG2Q86XI2 1143 aa10.39□□□□□ -0.75
CCDC113-205ENST00000569374 SYTL4Q96C24 671 aaPredicted RBP10.39□□□□□ -0.75
CCDC113-205ENST00000569374 GMCL1Q96IK5 515 aa10.39□□□□□ -0.75
CCDC113-205ENST00000569374 PANK3Q9H999 370 aa10.39□□□□□ -0.75
CCDC113-205ENST00000569374 KANSL3Q9P2N6 904 aa10.39□□□□□ -0.75
CCDC113-205ENST00000569374 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.39□□□□□ -0.75
CCDC113-205ENST00000569374 SENP3-EIF4A1A0A087X0R7 540 aa10.38□□□□□ -0.75
CCDC113-205ENST00000569374 DCDC2BA2VCK2 349 aa10.38□□□□□ -0.75
CCDC113-205ENST00000569374 HYAL2Q12891 473 aa10.38□□□□□ -0.75
CCDC113-205ENST00000569374 SOGA3Q5TF21 947 aa10.38□□□□□ -0.75
CCDC113-205ENST00000569374 SMIM5Q71RC9 77 aa10.38□□□□□ -0.75
CCDC113-205ENST00000569374 AMIGO3Q86WK7 504 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms