RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 GPATCH3Q96I76 525 aa11.35□□□□□ -0.59
UBR1-210ENST00000569337 DNAJC2Q99543 621 aaKnown RBP11.35□□□□□ -0.59
UBR1-210ENST00000569337 MCOLN1Q9GZU1 580 aa11.35□□□□□ -0.59
UBR1-210ENST00000569337 OSBPL5Q9H0X9 879 aaPredicted RBP11.35□□□□□ -0.59
UBR1-210ENST00000569337 R3HDMLQ9H3Y0 253 aa11.35□□□□□ -0.59
UBR1-210ENST00000569337 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.35□□□□□ -0.59
UBR1-210ENST00000569337 PICK1Q9NRD5 415 aa11.35□□□□□ -0.59
UBR1-210ENST00000569337 RFX7Q2KHR2 1363 aa11.35□□□□□ -0.59
UBR1-210ENST00000569337 ATRNL1Q5VV63 1379 aa11.34□□□□□ -0.59
UBR1-210ENST00000569337 PHF20L1A8MW92 1017 aa11.34□□□□□ -0.59
UBR1-210ENST00000569337 GOLIM4O00461 696 aa11.34□□□□□ -0.59
UBR1-210ENST00000569337 ERC2O15083 957 aa11.34□□□□□ -0.59
UBR1-210ENST00000569337 TBC1D12O60347 775 aa11.34□□□□□ -0.59
UBR1-210ENST00000569337 CTNND1O60716 968 aaKnown RBP11.34□□□□□ -0.59
UBR1-210ENST00000569337 FKTNO75072 461 aa11.34□□□□□ -0.59
UBR1-210ENST00000569337 DYNLL1P63167 89 aaKnown RBP11.34□□□□□ -0.59
UBR1-210ENST00000569337 MAPKAPK5Q8IW41 473 aa11.34□□□□□ -0.59
UBR1-210ENST00000569337 MIGA1Q8NAN2 632 aa11.34□□□□□ -0.59
UBR1-210ENST00000569337 DHX36Q9H2U1 1008 aaKnown RBP11.34□□□□□ -0.59
UBR1-210ENST00000569337 MYH2Q9UKX2 1941 aa11.33□□□□□ -0.6
UBR1-210ENST00000569337 CHGBP05060 677 aa11.33□□□□□ -0.6
UBR1-210ENST00000569337 SLURP2P0DP57 97 aa11.33□□□□□ -0.6
UBR1-210ENST00000569337 CRHR2Q13324 411 aa11.33□□□□□ -0.6
UBR1-210ENST00000569337 TAF1CQ15572 869 aaPredicted RBP11.33□□□□□ -0.6
UBR1-210ENST00000569337 SLC9C2Q5TAH2 1124 aa11.33□□□□□ -0.6
UBR1-210ENST00000569337 CTU1Q7Z7A3 348 aaKnown RBP11.33□□□□□ -0.6
UBR1-210ENST00000569337 SCYL3Q8IZE3 742 aa11.33□□□□□ -0.6
UBR1-210ENST00000569337 ZFYVE28Q9HCC9 887 aa11.33□□□□□ -0.6
UBR1-210ENST00000569337 PAG1Q9NWQ8 432 aa11.33□□□□□ -0.6
UBR1-210ENST00000569337 PI4KBQ9UBF8 816 aa11.33□□□□□ -0.6
UBR1-210ENST00000569337 ZHX2Q9Y6X8 837 aa11.33□□□□□ -0.6
UBR1-210ENST00000569337 FAM196BA6NMK8 535 aa11.32□□□□□ -0.6
UBR1-210ENST00000569337 BTBD19C9JJ37 291 aa11.32□□□□□ -0.6
UBR1-210ENST00000569337 CXCL11O14625 94 aa11.32□□□□□ -0.6
UBR1-210ENST00000569337 PTPRAP18433 802 aa11.32□□□□□ -0.6
UBR1-210ENST00000569337 SDSP20132 328 aa11.32□□□□□ -0.6
UBR1-210ENST00000569337 USP5P45974 858 aa11.32□□□□□ -0.6
UBR1-210ENST00000569337 SLFNL1Q499Z3 407 aa11.32□□□□□ -0.6
UBR1-210ENST00000569337 FAM43AQ8N2R8 423 aa11.32□□□□□ -0.6
UBR1-210ENST00000569337 TRIM34Q9BYJ4 488 aa11.32□□□□□ -0.6
UBR1-210ENST00000569337 HERC5Q9UII4 1024 aaKnown RBP11.32□□□□□ -0.6
UBR1-210ENST00000569337 PALD1Q9ULE6 856 aa11.32□□□□□ -0.6
UBR1-210ENST00000569337 KCNH4Q9UQ05 1017 aa11.32□□□□□ -0.6
UBR1-210ENST00000569337 FLT1P17948 1338 aa11.32□□□□□ -0.6
UBR1-210ENST00000569337 MAGEB6P1A0A0J9YX57 407 aa11.31□□□□□ -0.6
UBR1-210ENST00000569337 CCDC85CA6NKD9 419 aa11.31□□□□□ -0.6
UBR1-210ENST00000569337 TRIM6-TRIM34B2RNG4 842 aa11.31□□□□□ -0.6
UBR1-210ENST00000569337 HLA-DOAP06340 250 aa11.31□□□□□ -0.6
UBR1-210ENST00000569337 PDE6AP16499 860 aa11.31□□□□□ -0.6
UBR1-210ENST00000569337 PKN2Q16513 984 aaKnown RBP11.31□□□□□ -0.6
UBR1-210ENST00000569337 BMP2KLQ5H9B9 411 aa11.31□□□□□ -0.6
UBR1-210ENST00000569337 FOXP4Q8IVH2 680 aaPredicted RBP11.31□□□□□ -0.6
UBR1-210ENST00000569337 CRACR2BQ8N4Y2 399 aaPredicted RBP11.31□□□□□ -0.6
UBR1-210ENST00000569337 ZCCHC17Q9NP64 241 aaKnown RBP11.31□□□□□ -0.6
UBR1-210ENST00000569337 SAP30BPQ9UHR5 308 aaKnown RBP11.31□□□□□ -0.6
UBR1-210ENST00000569337 ZNF532Q9HCE3 1301 aa11.31□□□□□ -0.6
UBR1-210ENST00000569337 COL2A1P02458 1487 aaPredicted RBP11.31□□□□□ -0.6
UBR1-210ENST00000569337 CAP2P40123 477 aa11.3□□□□□ -0.6
UBR1-210ENST00000569337 SP3Q02447 781 aa11.3□□□□□ -0.6
UBR1-210ENST00000569337 ANKRD23Q86SG2 305 aa11.3□□□□□ -0.6
UBR1-210ENST00000569337 RILPL2Q969X0 211 aa11.3□□□□□ -0.6
UBR1-210ENST00000569337 EVI5LQ96CN4 794 aa11.3□□□□□ -0.6
UBR1-210ENST00000569337 ERO1AQ96HE7 468 aa11.3□□□□□ -0.6
UBR1-210ENST00000569337 RIOK1Q9BRS2 568 aaKnown RBP11.3□□□□□ -0.6
UBR1-210ENST00000569337 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.3□□□□□ -0.6
UBR1-210ENST00000569337 AFG3L2Q9Y4W6 797 aa11.3□□□□□ -0.6
UBR1-210ENST00000569337 MAST2Q6P0Q8 1798 aa11.3□□□□□ -0.6
UBR1-210ENST00000569337 TRIM75PA6NK02 468 aa11.29□□□□□ -0.6
UBR1-210ENST00000569337 PDHXO00330 501 aa11.29□□□□□ -0.6
UBR1-210ENST00000569337 TLR2O60603 784 aa11.29□□□□□ -0.6
UBR1-210ENST00000569337 SLC4A8Q2Y0W8 1093 aa11.29□□□□□ -0.6
UBR1-210ENST00000569337 ZSCAN25Q6NSZ9 544 aa11.29□□□□□ -0.6
UBR1-210ENST00000569337 FASTKD5Q7L8L6 764 aaKnown RBP11.29□□□□□ -0.6
UBR1-210ENST00000569337 TTC6Q86TZ1 520 aa11.29□□□□□ -0.6
UBR1-210ENST00000569337 KBTBD3Q8NAB2 608 aa11.29□□□□□ -0.6
UBR1-210ENST00000569337 CRNKL1Q9BZJ0 848 aaKnown RBP11.29□□□□□ -0.6
UBR1-210ENST00000569337 CDK5RAP2Q96SN8 1893 aa11.28□□□□□ -0.6
UBR1-210ENST00000569337 A0A0G2JLL6 359 aaPredicted RBP11.28□□□□□ -0.6
UBR1-210ENST00000569337 TCRBV5S4A2TA0A5A2 114 aa11.28□□□□□ -0.6
UBR1-210ENST00000569337 USP17L5A8MUK1 530 aa11.28□□□□□ -0.6
UBR1-210ENST00000569337 ADD2P35612 726 aa11.28□□□□□ -0.6
UBR1-210ENST00000569337 ARHGEF6Q15052 776 aa11.28□□□□□ -0.6
UBR1-210ENST00000569337 GADL1Q6ZQY3 521 aa11.28□□□□□ -0.6
UBR1-210ENST00000569337 PRRT2Q7Z6L0 340 aaPredicted RBP11.28□□□□□ -0.6
UBR1-210ENST00000569337 CCDC84Q86UT8 332 aaPredicted RBP11.28□□□□□ -0.6
UBR1-210ENST00000569337 METTL16Q86W50 562 aaKnown RBP11.28□□□□□ -0.6
UBR1-210ENST00000569337 CD99L2Q8TCZ2 262 aa11.28□□□□□ -0.6
UBR1-210ENST00000569337 FSD1Q9BTV5 496 aa11.28□□□□□ -0.6
UBR1-210ENST00000569337 TBC1D2Q9BYX2 928 aa11.28□□□□□ -0.6
UBR1-210ENST00000569337 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.28□□□□□ -0.6
UBR1-210ENST00000569337 TRIM17Q9Y577 477 aa11.28□□□□□ -0.6
UBR1-210ENST00000569337 OTOFQ9HC10 1997 aa11.28□□□□□ -0.6
UBR1-210ENST00000569337 CASP8AP2Q9UKL3 1982 aa11.28□□□□□ -0.6
UBR1-210ENST00000569337 POLR3DP05423 398 aaPredicted RBP11.27□□□□□ -0.61
UBR1-210ENST00000569337 ASNSP08243 561 aa11.27□□□□□ -0.61
UBR1-210ENST00000569337 SPP2Q13103 211 aa11.27□□□□□ -0.61
UBR1-210ENST00000569337 MOGSQ13724 837 aa11.27□□□□□ -0.61
UBR1-210ENST00000569337 RRP1BQ14684 758 aaKnown RBP11.27□□□□□ -0.61
UBR1-210ENST00000569337 UBE3CQ15386 1083 aa11.27□□□□□ -0.61
UBR1-210ENST00000569337 FBXO46Q6PJ61 603 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms