RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 LOC285556D6RIA3 1793 aa16.78■□□□□ 0.28
CNOT1-215ENST00000569020 FAM196BA6NMK8 535 aa16.77■□□□□ 0.28
CNOT1-215ENST00000569020 BAG3O95817 575 aa16.77■□□□□ 0.28
CNOT1-215ENST00000569020 ATP8B2P98198 1209 aa16.77■□□□□ 0.28
CNOT1-215ENST00000569020 PRKCZQ05513 592 aa16.77■□□□□ 0.28
CNOT1-215ENST00000569020 MTFR1Q15390 333 aa16.77■□□□□ 0.28
CNOT1-215ENST00000569020 FTSJ3Q8IY81 847 aaKnown RBP16.77■□□□□ 0.28
CNOT1-215ENST00000569020 TEX11Q8IYF3 940 aa16.77■□□□□ 0.28
CNOT1-215ENST00000569020 SSH3Q8TE77 659 aa16.77■□□□□ 0.28
CNOT1-215ENST00000569020 TBC1D2Q9BYX2 928 aa16.77■□□□□ 0.28
CNOT1-215ENST00000569020 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.77■□□□□ 0.28
CNOT1-215ENST00000569020 BIN2Q9UBW5 565 aaPredicted RBP16.77■□□□□ 0.28
CNOT1-215ENST00000569020 PNMA3Q9UL41 463 aa16.77■□□□□ 0.28
CNOT1-215ENST00000569020 AGTPBP1Q9UPW5 1226 aa16.77■□□□□ 0.28
CNOT1-215ENST00000569020 SURF6O75683 361 aaKnown RBP16.76■□□□□ 0.27
CNOT1-215ENST00000569020 HNRNPUQ00839 825 aaKnown RBP eCLIP16.76■□□□□ 0.27
CNOT1-215ENST00000569020 HABP4Q5JVS0 413 aaKnown RBP16.76■□□□□ 0.27
CNOT1-215ENST00000569020 NAA16Q6N069 864 aaPredicted RBP16.76■□□□□ 0.27
CNOT1-215ENST00000569020 CCDC84Q86UT8 332 aaPredicted RBP16.76■□□□□ 0.27
CNOT1-215ENST00000569020 SLAIN1Q8ND83 568 aa16.76■□□□□ 0.27
CNOT1-215ENST00000569020 SIPA1L1O43166 1804 aa16.75■□□□□ 0.27
CNOT1-215ENST00000569020 TNPO2O14787 897 aaKnown RBP16.75■□□□□ 0.27
CNOT1-215ENST00000569020 PLCG2P16885 1265 aa16.75■□□□□ 0.27
CNOT1-215ENST00000569020 CAP2P40123 477 aa16.75■□□□□ 0.27
CNOT1-215ENST00000569020 PROCA1Q8NCQ7 364 aaPredicted RBP16.75■□□□□ 0.27
CNOT1-215ENST00000569020 ZNF280CQ8ND82 737 aa16.75■□□□□ 0.27
CNOT1-215ENST00000569020 SH3RF3Q8TEJ3 882 aaPredicted RBP16.75■□□□□ 0.27
CNOT1-215ENST00000569020 DBNDD2Q9BQY9 259 aa16.75■□□□□ 0.27
CNOT1-215ENST00000569020 DHX36Q9H2U1 1008 aaKnown RBP16.75■□□□□ 0.27
CNOT1-215ENST00000569020 AS3MTQ9HBK9 375 aa16.75■□□□□ 0.27
CNOT1-215ENST00000569020 SNRKQ9NRH2 765 aa16.75■□□□□ 0.27
CNOT1-215ENST00000569020 AATFQ9NY61 560 aaKnown RBP eCLIP16.75■□□□□ 0.27
CNOT1-215ENST00000569020 PI4KBQ9UBF8 816 aa16.75■□□□□ 0.27
CNOT1-215ENST00000569020 HERC5Q9UII4 1024 aaKnown RBP16.75■□□□□ 0.27
CNOT1-215ENST00000569020 GABRQQ9UN88 632 aa16.75■□□□□ 0.27
CNOT1-215ENST00000569020 BRCA2P51587 3418 aa16.74■□□□□ 0.27
CNOT1-215ENST00000569020 USP17L5A8MUK1 530 aa16.74■□□□□ 0.27
CNOT1-215ENST00000569020 IGSF3O75054 1194 aa16.74■□□□□ 0.27
CNOT1-215ENST00000569020 CCL5P13501 91 aa16.74■□□□□ 0.27
CNOT1-215ENST00000569020 SPP2Q13103 211 aa16.74■□□□□ 0.27
CNOT1-215ENST00000569020 ITPRIPQ8IWB1 547 aa16.74■□□□□ 0.27
CNOT1-215ENST00000569020 ANKRD13CQ8N6S4 541 aa16.74■□□□□ 0.27
CNOT1-215ENST00000569020 RNF208Q9H0X6 261 aa16.74■□□□□ 0.27
CNOT1-215ENST00000569020 C1orf115Q9H7X2 142 aa16.74■□□□□ 0.27
CNOT1-215ENST00000569020 MYH1P12882 1939 aa16.73■□□□□ 0.27
CNOT1-215ENST00000569020 ADCY3O60266 1144 aa16.73■□□□□ 0.27
CNOT1-215ENST00000569020 GJB1P08034 283 aa16.73■□□□□ 0.27
CNOT1-215ENST00000569020 GJA8P48165 433 aa16.73■□□□□ 0.27
CNOT1-215ENST00000569020 FLT3LGP49771 235 aa16.73■□□□□ 0.27
CNOT1-215ENST00000569020 PABPC4Q13310 644 aaKnown RBP eCLIP16.73■□□□□ 0.27
CNOT1-215ENST00000569020 TREML2Q5T2D2 321 aa16.73■□□□□ 0.27
CNOT1-215ENST00000569020 SHISA4Q96DD7 197 aa16.73■□□□□ 0.27
CNOT1-215ENST00000569020 ZNF512BQ96KM6 892 aaPredicted RBP16.73■□□□□ 0.27
CNOT1-215ENST00000569020 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
CNOT1-215ENST00000569020 DOCK3Q8IZD9 2030 aa16.73■□□□□ 0.27
CNOT1-215ENST00000569020 CYP2E1P05181 493 aaPredicted RBP16.72■□□□□ 0.27
CNOT1-215ENST00000569020 PPP4CP60510 307 aa16.72■□□□□ 0.27
CNOT1-215ENST00000569020 FAM110CQ1W6H9 321 aa16.72■□□□□ 0.27
CNOT1-215ENST00000569020 PXYLP1Q8TE99 480 aa16.72■□□□□ 0.27
CNOT1-215ENST00000569020 TGFBRAP1Q8WUH2 860 aa16.72■□□□□ 0.27
CNOT1-215ENST00000569020 COA7Q96BR5 231 aa16.72■□□□□ 0.27
CNOT1-215ENST00000569020 TRIM34Q9BYJ4 488 aa16.72■□□□□ 0.27
CNOT1-215ENST00000569020 NOP58Q9Y2X3 529 aaKnown RBP16.72■□□□□ 0.27
CNOT1-215ENST00000569020 MKI67P46013 3256 aaKnown RBP16.72■□□□□ 0.27
CNOT1-215ENST00000569020 ZBTB7BO15156 539 aaPredicted RBP16.71■□□□□ 0.27
CNOT1-215ENST00000569020 ZAP70P43403 619 aa16.71■□□□□ 0.27
CNOT1-215ENST00000569020 GCLCP48506 637 aaPredicted RBP16.71■□□□□ 0.27
CNOT1-215ENST00000569020 HMGCS2P54868 508 aa16.71■□□□□ 0.27
CNOT1-215ENST00000569020 IRF5Q13568 498 aa16.71■□□□□ 0.27
CNOT1-215ENST00000569020 DIEXFQ68CQ4 756 aaKnown RBP16.71■□□□□ 0.27
CNOT1-215ENST00000569020 FOXP4Q8IVH2 680 aaPredicted RBP16.71■□□□□ 0.27
CNOT1-215ENST00000569020 MAPKAPK5Q8IW41 473 aa16.71■□□□□ 0.27
CNOT1-215ENST00000569020 ASNSP08243 561 aa16.7■□□□□ 0.26
CNOT1-215ENST00000569020 RRP1BQ14684 758 aaKnown RBP16.7■□□□□ 0.26
CNOT1-215ENST00000569020 SH3D19Q5HYK7 790 aa16.7■□□□□ 0.26
CNOT1-215ENST00000569020 ADGRA1Q86SQ6 560 aa16.7■□□□□ 0.26
CNOT1-215ENST00000569020 CRACR2BQ8N4Y2 399 aaPredicted RBP16.7■□□□□ 0.26
CNOT1-215ENST00000569020 DPF3Q92784 378 aa16.7■□□□□ 0.26
CNOT1-215ENST00000569020 HTATIP2Q9BUP3 242 aa16.7■□□□□ 0.26
CNOT1-215ENST00000569020 CCDC8Q9H0W5 538 aaPredicted RBP16.7■□□□□ 0.26
CNOT1-215ENST00000569020 UNC93B1Q9H1C4 597 aa16.7■□□□□ 0.26
CNOT1-215ENST00000569020 TAOK2Q9UL54 1235 aa16.7■□□□□ 0.26
CNOT1-215ENST00000569020 FLT1P17948 1338 aa16.7■□□□□ 0.26
CNOT1-215ENST00000569020 HLA-DOAP06340 250 aa16.69■□□□□ 0.26
CNOT1-215ENST00000569020 ELNP15502 786 aa16.69■□□□□ 0.26
CNOT1-215ENST00000569020 U2AF1L4Q8WU68 220 aaKnown RBP16.69■□□□□ 0.26
CNOT1-215ENST00000569020 TMOD4Q9NZQ9 345 aa16.69■□□□□ 0.26
CNOT1-215ENST00000569020 DBNLQ9UJU6 430 aaKnown RBP16.69■□□□□ 0.26
CNOT1-215ENST00000569020 PALD1Q9ULE6 856 aa16.69■□□□□ 0.26
CNOT1-215ENST00000569020 H0YGN5 161 aa16.68■□□□□ 0.26
CNOT1-215ENST00000569020 SGPL1O95470 568 aa16.68■□□□□ 0.26
CNOT1-215ENST00000569020 INHAP05111 366 aa16.68■□□□□ 0.26
CNOT1-215ENST00000569020 RLBP1P12271 317 aa16.68■□□□□ 0.26
CNOT1-215ENST00000569020 CAPN2P17655 700 aa16.68■□□□□ 0.26
CNOT1-215ENST00000569020 CYP7A1P22680 504 aa16.68■□□□□ 0.26
CNOT1-215ENST00000569020 CERS3Q8IU89 383 aa16.68■□□□□ 0.26
CNOT1-215ENST00000569020 MIER1Q8N108 512 aa16.68■□□□□ 0.26
CNOT1-215ENST00000569020 EAF2Q96CJ1 260 aaPredicted RBP16.68■□□□□ 0.26
CNOT1-215ENST00000569020 WDR18Q9BV38 432 aa16.68■□□□□ 0.26
CNOT1-215ENST00000569020 ASCC2Q9H1I8 757 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms