RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 PANK2Q9BZ23 570 aa14.03□□□□□ -0.16
TMEM170A-205ENST00000568559 GOLGA6L19H0YKK7 550 aa14.03□□□□□ -0.16
TMEM170A-205ENST00000568559 CYP2D6P10635 497 aa14.03□□□□□ -0.16
TMEM170A-205ENST00000568559 LMOD1P29536 600 aaPredicted RBP14.03□□□□□ -0.16
TMEM170A-205ENST00000568559 HOOK1Q9UJC3 728 aaKnown RBP14.03□□□□□ -0.16
TMEM170A-205ENST00000568559 PFKFB2O60825 505 aa14.03□□□□□ -0.16
TMEM170A-205ENST00000568559 PPP4R3BQ5MIZ7 849 aa14.03□□□□□ -0.16
TMEM170A-205ENST00000568559 HEATR3Q7Z4Q2 680 aa14.03□□□□□ -0.16
TMEM170A-205ENST00000568559 CCAR2Q8N163 923 aaKnown RBP14.03□□□□□ -0.16
TMEM170A-205ENST00000568559 ZHX3Q9H4I2 956 aa14.03□□□□□ -0.16
TMEM170A-205ENST00000568559 NRDCO43847 1150 aa14.02□□□□□ -0.16
TMEM170A-205ENST00000568559 CACNB3P54284 484 aa14.02□□□□□ -0.16
TMEM170A-205ENST00000568559 SCRN1Q12765 414 aa14.02□□□□□ -0.16
TMEM170A-205ENST00000568559 GPR162Q16538 588 aa14.02□□□□□ -0.16
TMEM170A-205ENST00000568559 FAM173BQ6P4H8 233 aa14.02□□□□□ -0.16
TMEM170A-205ENST00000568559 CMTR1Q8N1G2 835 aaKnown RBP14.02□□□□□ -0.16
TMEM170A-205ENST00000568559 PCMTD1Q96MG8 357 aaPredicted RBP14.02□□□□□ -0.16
TMEM170A-205ENST00000568559 MXD3Q9BW11 206 aa14.02□□□□□ -0.16
TMEM170A-205ENST00000568559 DCP1AQ9NPI6 582 aaPredicted RBP14.02□□□□□ -0.16
TMEM170A-205ENST00000568559 V9GY48 417 aaPredicted RBP14.02□□□□□ -0.16
TMEM170A-205ENST00000568559 CCDC194A0A1B0GVG4 234 aa14.02□□□□□ -0.16
TMEM170A-205ENST00000568559 KIAA2012Q0VF49 1180 aa14.02□□□□□ -0.16
TMEM170A-205ENST00000568559 TAF6LQ9Y6J9 622 aa14.02□□□□□ -0.16
TMEM170A-205ENST00000568559 HOXA10P31260 410 aaPredicted RBP14.02□□□□□ -0.17
TMEM170A-205ENST00000568559 TNIP1Q15025 636 aa14.02□□□□□ -0.17
TMEM170A-205ENST00000568559 RBM28Q9NW13 759 aaKnown RBP14.02□□□□□ -0.17
TMEM170A-205ENST00000568559 MROH7-TTC4A0A0A0MT08 1334 aa14.02□□□□□ -0.17
TMEM170A-205ENST00000568559 hCG_1642624A0A1W2PR95 340 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 H7C1D1 291 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 TPM4P67936 248 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 CAMK4Q16566 473 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 STOX1Q6ZVD7 989 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 RIC1Q4ADV7 1423 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 PARP1P09874 1014 aaKnown RBP14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 CRKP46108 304 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 TNMDQ9H2S6 317 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 SPON1Q9HCB6 807 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 WDR78Q5VTH9 848 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 USP48Q86UV5 1035 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 CAMKK2Q96RR4 588 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 MTFR1LQ9H019 292 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 C5P01031 1676 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 MYCNP04198 464 aaPredicted RBP14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 PCP11498 1178 aaKnown RBP14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 ALX1Q15699 326 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 CIAPIN1Q6FI81 312 aa14.01□□□□□ -0.17
TMEM170A-205ENST00000568559 RPAP1Q9BWH6 1393 aaPredicted RBP14□□□□□ -0.17
TMEM170A-205ENST00000568559 SSBP05455 408 aaKnown RBP eCLIP14□□□□□ -0.17
TMEM170A-205ENST00000568559 CUL4AQ13619 759 aa14□□□□□ -0.17
TMEM170A-205ENST00000568559 GRIPAP1Q4V328 841 aa14□□□□□ -0.17
TMEM170A-205ENST00000568559 CCDC12Q8WUD4 166 aaPredicted RBP14□□□□□ -0.17
TMEM170A-205ENST00000568559 GPCPD1Q9NPB8 672 aa14□□□□□ -0.17
TMEM170A-205ENST00000568559 CLIP2Q9UDT6 1046 aa14□□□□□ -0.17
TMEM170A-205ENST00000568559 CEP131Q9UPN4 1083 aa14□□□□□ -0.17
TMEM170A-205ENST00000568559 TOB2Q14106 344 aaPredicted RBP14□□□□□ -0.17
TMEM170A-205ENST00000568559 APOA5Q6Q788 366 aa14□□□□□ -0.17
TMEM170A-205ENST00000568559 FANCBQ8NB91 859 aa14□□□□□ -0.17
TMEM170A-205ENST00000568559 CDC37L1Q7L3B6 337 aa14□□□□□ -0.17
TMEM170A-205ENST00000568559 TTC14Q96N46 770 aa14□□□□□ -0.17
TMEM170A-205ENST00000568559 FAM13BQ9NYF5 915 aa14□□□□□ -0.17
TMEM170A-205ENST00000568559 CLEC11AQ9Y240 323 aa14□□□□□ -0.17
TMEM170A-205ENST00000568559 NEDD4P46934 1319 aa14□□□□□ -0.17
TMEM170A-205ENST00000568559 NWD2Q9ULI1 1742 aa14□□□□□ -0.17
TMEM170A-205ENST00000568559 AFDNP55196 1824 aaKnown RBP13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 TXLNAP40222 546 aa13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 CFAP100Q494V2 611 aa13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 GIMAP6Q6P9H5 292 aa13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 CTR9Q6PD62 1173 aa13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 TMED8Q6PL24 325 aaPredicted RBP13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 LETM1O95202 739 aaPredicted RBP13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 TSGA10IPQ3SY00 556 aa13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 SPC24Q8NBT2 197 aa13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 SERPINB13Q9UIV8 391 aa13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 ABCA3Q99758 1704 aa13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 DEXIO95424 95 aa13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 PNMA1Q8ND90 353 aa13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 NUP62CLQ9H1M0 184 aa13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 NAPAP54920 295 aa13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 STAG1Q8WVM7 1258 aa13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 RRP36Q96EU6 259 aaKnown RBP13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 TDRD3Q9H7E2 651 aaKnown RBP13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 RBM27Q9P2N5 1060 aaKnown RBP13.99□□□□□ -0.17
TMEM170A-205ENST00000568559 SYCE3A1L190 88 aa13.98□□□□□ -0.17
TMEM170A-205ENST00000568559 SH2B2O14492 632 aaPredicted RBP13.98□□□□□ -0.17
TMEM170A-205ENST00000568559 BRD1O95696 1058 aa13.98□□□□□ -0.17
TMEM170A-205ENST00000568559 CYB5R4Q7L1T6 521 aa13.98□□□□□ -0.17
TMEM170A-205ENST00000568559 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.98□□□□□ -0.17
TMEM170A-205ENST00000568559 CRY2Q49AN0 593 aa13.98□□□□□ -0.17
TMEM170A-205ENST00000568559 UBE2HP62256 183 aa13.98□□□□□ -0.17
TMEM170A-205ENST00000568559 ZYXQ15942 572 aaKnown RBP13.98□□□□□ -0.17
TMEM170A-205ENST00000568559 CERKLQ49MI3 558 aaPredicted RBP13.98□□□□□ -0.17
TMEM170A-205ENST00000568559 STRIP1Q5VSL9 837 aa13.98□□□□□ -0.17
TMEM170A-205ENST00000568559 PAXIP1Q6ZW49 1069 aaPredicted RBP13.98□□□□□ -0.17
TMEM170A-205ENST00000568559 CSRNP1Q96S65 589 aa13.98□□□□□ -0.17
TMEM170A-205ENST00000568559 EPB41L4AQ9HCS5 686 aaPredicted RBP13.98□□□□□ -0.17
TMEM170A-205ENST00000568559 ZMYM6O95789 1325 aa13.97□□□□□ -0.17
TMEM170A-205ENST00000568559 PPP2R5BQ15173 497 aa13.97□□□□□ -0.17
TMEM170A-205ENST00000568559 SLC44A5Q8NCS7 719 aa13.97□□□□□ -0.17
TMEM170A-205ENST00000568559 CCDC148Q8NFR7 591 aa13.97□□□□□ -0.17
TMEM170A-205ENST00000568559 DAGLAQ9Y4D2 1042 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms