RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 EAF1Q96JC9 268 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-212ENST00000567944 RAXQ9Y2V3 346 aa6.54□□□□□ -1.36
HERPUD1-212ENST00000567944 RAB6AP20340 208 aa6.53□□□□□ -1.36
HERPUD1-212ENST00000567944 SNAP47Q5SQN1 464 aa6.53□□□□□ -1.36
HERPUD1-212ENST00000567944 HDXQ7Z353 690 aa6.53□□□□□ -1.36
HERPUD1-212ENST00000567944 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
HERPUD1-212ENST00000567944 GATA6Q92908 595 aa6.53□□□□□ -1.36
HERPUD1-212ENST00000567944 LRRC3Q9BY71 257 aa6.53□□□□□ -1.36
HERPUD1-212ENST00000567944 ZFP64Q9NPA5 681 aa6.53□□□□□ -1.36
HERPUD1-212ENST00000567944 C1GALT1Q9NS00 363 aa6.53□□□□□ -1.36
HERPUD1-212ENST00000567944 POLR3KQ9Y2Y1 108 aaPredicted RBP6.53□□□□□ -1.36
HERPUD1-212ENST00000567944 KRTAP4-8A0A0G2JLE6 195 aa6.52□□□□□ -1.37
HERPUD1-212ENST00000567944 FAM95CA0A1B0GW59 222 aa6.52□□□□□ -1.37
HERPUD1-212ENST00000567944 FANCGO15287 622 aa6.52□□□□□ -1.37
HERPUD1-212ENST00000567944 LMNB1P20700 586 aa6.52□□□□□ -1.37
HERPUD1-212ENST00000567944 ARTNQ5T4W7 220 aa6.52□□□□□ -1.37
HERPUD1-212ENST00000567944 SMYD4Q8IYR2 804 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-212ENST00000567944 ELMO3Q96BJ8 720 aa6.52□□□□□ -1.37
HERPUD1-212ENST00000567944 WNT10AQ9GZT5 417 aa6.52□□□□□ -1.37
HERPUD1-212ENST00000567944 KCNF1Q9H3M0 494 aa6.52□□□□□ -1.37
HERPUD1-212ENST00000567944 FBRSQ9HAH7 460 aa6.52□□□□□ -1.37
HERPUD1-212ENST00000567944 UBP1Q9NZI7 540 aa6.52□□□□□ -1.37
HERPUD1-212ENST00000567944 STOML1Q9UBI4 398 aa6.52□□□□□ -1.37
HERPUD1-212ENST00000567944 SUPT16HQ9Y5B9 1047 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-212ENST00000567944 CORINQ9Y5Q5 1042 aa6.52□□□□□ -1.37
HERPUD1-212ENST00000567944 PRAMEF27A3QJZ7 478 aa6.51□□□□□ -1.37
HERPUD1-212ENST00000567944 TLR3O15455 904 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-212ENST00000567944 ADMP35318 185 aa6.51□□□□□ -1.37
HERPUD1-212ENST00000567944 HNRNPUQ00839 825 aaKnown RBP eCLIP6.51□□□□□ -1.37
HERPUD1-212ENST00000567944 MPP2Q14168 576 aa6.51□□□□□ -1.37
HERPUD1-212ENST00000567944 REC114Q7Z4M0 266 aa6.51□□□□□ -1.37
HERPUD1-212ENST00000567944 ZNF654Q8IZM8 581 aa6.51□□□□□ -1.37
HERPUD1-212ENST00000567944 SPON2Q9BUD6 331 aa6.51□□□□□ -1.37
HERPUD1-212ENST00000567944 NT5C1AQ9BXI3 368 aa6.51□□□□□ -1.37
HERPUD1-212ENST00000567944 LGR6Q9HBX8 967 aa6.51□□□□□ -1.37
HERPUD1-212ENST00000567944 PRKAG2Q9UGJ0 569 aa6.51□□□□□ -1.37
HERPUD1-212ENST00000567944 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-212ENST00000567944 TACC3Q9Y6A5 838 aa6.51□□□□□ -1.37
HERPUD1-212ENST00000567944 PRR36Q9H6K5 1346 aa6.5□□□□□ -1.37
HERPUD1-212ENST00000567944 ROBO2Q9HCK4 1378 aa6.5□□□□□ -1.37
HERPUD1-212ENST00000567944 RXRBP28702 533 aa6.5□□□□□ -1.37
HERPUD1-212ENST00000567944 GRK4P32298 578 aa6.5□□□□□ -1.37
HERPUD1-212ENST00000567944 NKG7Q16617 165 aa6.5□□□□□ -1.37
HERPUD1-212ENST00000567944 RNF43Q68DV7 783 aa6.5□□□□□ -1.37
HERPUD1-212ENST00000567944 NBPF11Q86T75 865 aa6.5□□□□□ -1.37
HERPUD1-212ENST00000567944 KIAA0825Q8IV33 1275 aa6.5□□□□□ -1.37
HERPUD1-212ENST00000567944 TGIF2Q9GZN2 237 aa6.5□□□□□ -1.37
HERPUD1-212ENST00000567944 ACBD3Q9H3P7 528 aa6.5□□□□□ -1.37
HERPUD1-212ENST00000567944 PIDD1Q9HB75 910 aa6.5□□□□□ -1.37
HERPUD1-212ENST00000567944 DAGLAQ9Y4D2 1042 aa6.5□□□□□ -1.37
HERPUD1-212ENST00000567944 RNGTTO60942 597 aaKnown RBP6.49□□□□□ -1.37
HERPUD1-212ENST00000567944 FSTP19883 344 aa6.49□□□□□ -1.37
HERPUD1-212ENST00000567944 TNNI2P48788 182 aa6.49□□□□□ -1.37
HERPUD1-212ENST00000567944 NFIAQ12857 509 aa6.49□□□□□ -1.37
HERPUD1-212ENST00000567944 SLBPQ14493 270 aaKnown RBP eCLIP6.49□□□□□ -1.37
HERPUD1-212ENST00000567944 NFKBIBQ15653 356 aa6.49□□□□□ -1.37
HERPUD1-212ENST00000567944 PRSS36Q5K4E3 855 aa6.49□□□□□ -1.37
HERPUD1-212ENST00000567944 SLITRK4Q8IW52 837 aa6.49□□□□□ -1.37
HERPUD1-212ENST00000567944 BRMS1Q9HCU9 246 aa6.49□□□□□ -1.37
HERPUD1-212ENST00000567944 PCOLCE2Q9UKZ9 415 aa6.49□□□□□ -1.37
HERPUD1-212ENST00000567944 RBAK-RBAKDNI3L0D1 243 aa6.48□□□□□ -1.37
HERPUD1-212ENST00000567944 GRIN3BO60391 1043 aa6.48□□□□□ -1.37
HERPUD1-212ENST00000567944 DNAJA2O60884 412 aa6.48□□□□□ -1.37
HERPUD1-212ENST00000567944 PAK2Q13177 524 aa6.48□□□□□ -1.37
HERPUD1-212ENST00000567944 MAP7Q14244 749 aa6.48□□□□□ -1.37
HERPUD1-212ENST00000567944 PAOXQ6QHF9 649 aa6.48□□□□□ -1.37
HERPUD1-212ENST00000567944 ZNF507Q8TCN5 953 aa6.48□□□□□ -1.37
HERPUD1-212ENST00000567944 BPNT1O95861 308 aa6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 IGLV1-40P01703 118 aa6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 F13BP05160 661 aa6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 ERCC5P28715 1186 aaPredicted RBP6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 CAP2P40123 477 aa6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 GJA8P48165 433 aa6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 APOBRQ0VD83 1088 aa6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 CDK5R2Q13319 367 aa6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 SEZ6Q53EL9 994 aa6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 ZAR1Q86SH2 424 aa6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 ACSF2Q96CM8 615 aaPredicted RBP6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 MFSD14AQ96MC6 490 aa6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 YIPF2Q9BWQ6 316 aa6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 TJP2Q9UDY2 1190 aa6.47□□□□□ -1.37
HERPUD1-212ENST00000567944 ATE1O95260 518 aa6.46□□□□□ -1.38
HERPUD1-212ENST00000567944 HTR3BO95264 441 aa6.46□□□□□ -1.38
HERPUD1-212ENST00000567944 ETF1P62495 437 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-212ENST00000567944 CLCQ05315 142 aa6.46□□□□□ -1.38
HERPUD1-212ENST00000567944 CWF19L2Q2TBE0 894 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-212ENST00000567944 TMEM201Q5SNT2 666 aa6.46□□□□□ -1.38
HERPUD1-212ENST00000567944 FAM214BQ7L5A3 538 aa6.46□□□□□ -1.38
HERPUD1-212ENST00000567944 ZDHHC13Q8IUH4 622 aa6.46□□□□□ -1.38
HERPUD1-212ENST00000567944 RASGRP4Q8TDF6 673 aa6.46□□□□□ -1.38
HERPUD1-212ENST00000567944 DBNDD2Q9BQY9 259 aa6.46□□□□□ -1.38
HERPUD1-212ENST00000567944 EHMT1Q9H9B1 1298 aa6.46□□□□□ -1.38
HERPUD1-212ENST00000567944 PRR19A6NJB7 356 aa6.45□□□□□ -1.38
HERPUD1-212ENST00000567944 FAM170BA6NMN3 283 aa6.45□□□□□ -1.38
HERPUD1-212ENST00000567944 LEFTY1O75610 366 aa6.45□□□□□ -1.38
HERPUD1-212ENST00000567944 PGRP06401 933 aa6.45□□□□□ -1.38
HERPUD1-212ENST00000567944 ARMCX6Q7L4S7 300 aa6.45□□□□□ -1.38
HERPUD1-212ENST00000567944 HID1Q8IV36 788 aa6.45□□□□□ -1.38
HERPUD1-212ENST00000567944 MCATQ8IVS2 390 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms