RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 MRIQ9BWK5 157 aa12.34□□□□□ -0.43
TCF4-236ENST00000567880 SLKQ9H2G2 1235 aaPredicted RBP12.34□□□□□ -0.43
TCF4-236ENST00000567880 MKRN1Q9UHC7 482 aaKnown RBP12.34□□□□□ -0.43
TCF4-236ENST00000567880 FZD9O00144 591 aa12.33□□□□□ -0.44
TCF4-236ENST00000567880 SOCS7O14512 581 aa12.33□□□□□ -0.44
TCF4-236ENST00000567880 LMNB1P20700 586 aa12.33□□□□□ -0.44
TCF4-236ENST00000567880 MCM5P33992 734 aa12.33□□□□□ -0.44
TCF4-236ENST00000567880 MB21D2Q8IYB1 491 aaPredicted RBP12.33□□□□□ -0.44
TCF4-236ENST00000567880 NKX2-3Q8TAU0 364 aa12.33□□□□□ -0.44
TCF4-236ENST00000567880 RNF41Q9H4P4 317 aaPredicted RBP12.33□□□□□ -0.44
TCF4-236ENST00000567880 ANAPC4Q9UJX5 808 aa12.33□□□□□ -0.44
TCF4-236ENST00000567880 ZNF541Q9H0D2 1346 aa12.33□□□□□ -0.44
TCF4-236ENST00000567880 PRC1O43663 620 aa12.33□□□□□ -0.44
TCF4-236ENST00000567880 KDM4AO75164 1064 aa12.33□□□□□ -0.44
TCF4-236ENST00000567880 PRDM1O75626 825 aa12.33□□□□□ -0.44
TCF4-236ENST00000567880 WDHD1O75717 1129 aaPredicted RBP12.33□□□□□ -0.44
TCF4-236ENST00000567880 EXOSC10Q01780 885 aaKnown RBP12.33□□□□□ -0.44
TCF4-236ENST00000567880 TOB2Q14106 344 aaPredicted RBP12.33□□□□□ -0.44
TCF4-236ENST00000567880 SBK1Q52WX2 424 aa12.33□□□□□ -0.44
TCF4-236ENST00000567880 PRMT6Q96LA8 375 aaPredicted RBP12.33□□□□□ -0.44
TCF4-236ENST00000567880 KRT23Q9C075 422 aa12.33□□□□□ -0.44
TCF4-236ENST00000567880 TDRD3Q9H7E2 651 aaKnown RBP12.33□□□□□ -0.44
TCF4-236ENST00000567880 CNNM2Q9H8M5 875 aa12.33□□□□□ -0.44
TCF4-236ENST00000567880 DDX4Q9NQI0 724 aaKnown RBP12.33□□□□□ -0.44
TCF4-236ENST00000567880 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
TCF4-236ENST00000567880 SHTN1A0MZ66 631 aa12.32□□□□□ -0.44
TCF4-236ENST00000567880 SLC3A2P08195 630 aaKnown RBP12.32□□□□□ -0.44
TCF4-236ENST00000567880 NFIAQ12857 509 aa12.32□□□□□ -0.44
TCF4-236ENST00000567880 ANKRD1Q15327 319 aa12.32□□□□□ -0.44
TCF4-236ENST00000567880 DLGAP5Q15398 846 aa12.32□□□□□ -0.44
TCF4-236ENST00000567880 GPR162Q16538 588 aa12.32□□□□□ -0.44
TCF4-236ENST00000567880 C12orf60Q5U649 245 aa12.32□□□□□ -0.44
TCF4-236ENST00000567880 CYB5R4Q7L1T6 521 aa12.32□□□□□ -0.44
TCF4-236ENST00000567880 BRF1Q92994 677 aa12.32□□□□□ -0.44
TCF4-236ENST00000567880 LARGE1O95461 756 aa12.31□□□□□ -0.44
TCF4-236ENST00000567880 PLCD1P51178 756 aa12.31□□□□□ -0.44
TCF4-236ENST00000567880 ANTXR2P58335 489 aa12.31□□□□□ -0.44
TCF4-236ENST00000567880 TCP10Q12799 353 aa12.31□□□□□ -0.44
TCF4-236ENST00000567880 DYNLL2Q96FJ2 89 aa12.31□□□□□ -0.44
TCF4-236ENST00000567880 RNF181Q9P0P0 153 aa12.31□□□□□ -0.44
TCF4-236ENST00000567880 TPCN1Q9ULQ1 816 aa12.31□□□□□ -0.44
TCF4-236ENST00000567880 NAP1L2Q9ULW6 460 aaPredicted RBP12.31□□□□□ -0.44
TCF4-236ENST00000567880 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
TCF4-236ENST00000567880 RANBP6O60518 1105 aaKnown RBP12.31□□□□□ -0.44
TCF4-236ENST00000567880 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
TCF4-236ENST00000567880 GMPSP49915 693 aaPredicted RBP12.31□□□□□ -0.44
TCF4-236ENST00000567880 ZKSCAN3Q9BRR0 538 aa12.31□□□□□ -0.44
TCF4-236ENST00000567880 GPHNQ9NQX3 736 aaPredicted RBP12.31□□□□□ -0.44
TCF4-236ENST00000567880 ZSWIM5Q9P217 1185 aa12.31□□□□□ -0.44
TCF4-236ENST00000567880 CLRN2A0PK11 232 aa12.3□□□□□ -0.44
TCF4-236ENST00000567880 RPS12P25398 132 aaKnown RBP12.3□□□□□ -0.44
TCF4-236ENST00000567880 PDE4BQ07343 736 aa12.3□□□□□ -0.44
TCF4-236ENST00000567880 APOBRQ0VD83 1088 aa12.3□□□□□ -0.44
TCF4-236ENST00000567880 STK3Q13188 491 aa12.3□□□□□ -0.44
TCF4-236ENST00000567880 RBM26Q5T8P6 1007 aaKnown RBP12.3□□□□□ -0.44
TCF4-236ENST00000567880 ESR2Q92731 530 aa12.3□□□□□ -0.44
TCF4-236ENST00000567880 OSBPL5Q9H0X9 879 aaPredicted RBP12.3□□□□□ -0.44
TCF4-236ENST00000567880 ALDH8A1Q9H2A2 487 aaPredicted RBP12.3□□□□□ -0.44
TCF4-236ENST00000567880 ME3Q16798 604 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 MICALL2Q8IY33 904 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 SLC44A5Q8NCS7 719 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 TRAIPQ9BWF2 469 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 MYOZ2Q9NPC6 264 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 TMOD2Q9NZR1 351 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 SIPA1L1O43166 1804 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 ROBO3Q96MS0 1386 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 WDR19Q8NEZ3 1342 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 IFIT3O14879 490 aaKnown RBP12.29□□□□□ -0.44
TCF4-236ENST00000567880 PCP11498 1178 aaKnown RBP12.29□□□□□ -0.44
TCF4-236ENST00000567880 TTC6Q86TZ1 520 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 CCDC83Q8IWF9 413 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 ZSCAN29Q8IWY8 852 aaPredicted RBP12.29□□□□□ -0.44
TCF4-236ENST00000567880 ZFPM1Q8IX07 1006 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 NECAB1Q8N987 351 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 ZSCAN31Q96LW9 406 aaPredicted RBP12.29□□□□□ -0.44
TCF4-236ENST00000567880 IDI2Q9BXS1 227 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 MKNK2Q9HBH9 465 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 SH2B1Q9NRF2 756 aaPredicted RBP12.29□□□□□ -0.44
TCF4-236ENST00000567880 FAM198AQ9UFP1 575 aa12.29□□□□□ -0.44
TCF4-236ENST00000567880 CNOT7Q9UIV1 285 aaKnown RBP12.29□□□□□ -0.44
TCF4-236ENST00000567880 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.29□□□□□ -0.44
TCF4-236ENST00000567880 TCP10L2B9ZVM9 353 aa12.28□□□□□ -0.44
TCF4-236ENST00000567880 MYO1BO43795 1136 aa12.28□□□□□ -0.44
TCF4-236ENST00000567880 FGRP09769 529 aa12.28□□□□□ -0.44
TCF4-236ENST00000567880 SART3Q15020 963 aaKnown RBP12.28□□□□□ -0.44
TCF4-236ENST00000567880 NBPF9Q3BBW0 867 aa12.28□□□□□ -0.44
TCF4-236ENST00000567880 TMEM67Q5HYA8 995 aa12.28□□□□□ -0.44
TCF4-236ENST00000567880 FAM47AQ5JRC9 791 aa12.28□□□□□ -0.44
TCF4-236ENST00000567880 C9orf131Q5VYM1 1079 aa12.28□□□□□ -0.44
TCF4-236ENST00000567880 UBAC1Q9BSL1 405 aa12.28□□□□□ -0.44
TCF4-236ENST00000567880 AGXT2Q9BYV1 514 aa12.28□□□□□ -0.44
TCF4-236ENST00000567880 VEZTQ9HBM0 779 aa12.28□□□□□ -0.44
TCF4-236ENST00000567880 ZNF70Q9UC06 446 aaPredicted RBP12.28□□□□□ -0.44
TCF4-236ENST00000567880 ANGEL1Q9UNK9 670 aaKnown RBP12.28□□□□□ -0.44
TCF4-236ENST00000567880 POLR2AP24928 1970 aaKnown RBP12.28□□□□□ -0.44
TCF4-236ENST00000567880 ERICH2A1L162 156 aa12.27□□□□□ -0.44
TCF4-236ENST00000567880 TSPY2A6NKD2 308 aa12.27□□□□□ -0.44
TCF4-236ENST00000567880 WNT10BO00744 389 aa12.27□□□□□ -0.44
TCF4-236ENST00000567880 SH2B2O14492 632 aaPredicted RBP12.27□□□□□ -0.44
TCF4-236ENST00000567880 ORC4O43929 436 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms