RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 GABRQQ9UN88 632 aa23.1■■□□□ 1.29
GTF3C1-207ENST00000567806 SURF6O75683 361 aaKnown RBP23.09■■□□□ 1.29
GTF3C1-207ENST00000567806 GJB1P08034 283 aa23.09■■□□□ 1.29
GTF3C1-207ENST00000567806 PLCG2P16885 1265 aa23.09■■□□□ 1.29
GTF3C1-207ENST00000567806 SPP2Q13103 211 aa23.09■■□□□ 1.29
GTF3C1-207ENST00000567806 TNNI3KQ59H18 835 aa23.09■■□□□ 1.29
GTF3C1-207ENST00000567806 PROCA1Q8NCQ7 364 aaPredicted RBP23.09■■□□□ 1.29
GTF3C1-207ENST00000567806 ZNF280CQ8ND82 737 aa23.09■■□□□ 1.29
GTF3C1-207ENST00000567806 SH3RF3Q8TEJ3 882 aaPredicted RBP23.09■■□□□ 1.29
GTF3C1-207ENST00000567806 TBC1D2Q9BYX2 928 aa23.09■■□□□ 1.29
GTF3C1-207ENST00000567806 FPGT-TNNI3KV9GXZ4 949 aa23.09■■□□□ 1.29
GTF3C1-207ENST00000567806 BRCA2P51587 3418 aa23.09■■□□□ 1.29
GTF3C1-207ENST00000567806 TNPO2O14787 897 aaKnown RBP23.08■■□□□ 1.29
GTF3C1-207ENST00000567806 ADCY3O60266 1144 aa23.08■■□□□ 1.29
GTF3C1-207ENST00000567806 CAP2P40123 477 aa23.08■■□□□ 1.29
GTF3C1-207ENST00000567806 GJA8P48165 433 aa23.08■■□□□ 1.29
GTF3C1-207ENST00000567806 FTSJ3Q8IY81 847 aaKnown RBP23.08■■□□□ 1.29
GTF3C1-207ENST00000567806 SSH3Q8TE77 659 aa23.08■■□□□ 1.29
GTF3C1-207ENST00000567806 DBNDD2Q9BQY9 259 aa23.08■■□□□ 1.29
GTF3C1-207ENST00000567806 PI4KBQ9UBF8 816 aa23.08■■□□□ 1.29
GTF3C1-207ENST00000567806 HERC5Q9UII4 1024 aaKnown RBP23.08■■□□□ 1.29
GTF3C1-207ENST00000567806 USP17L5A8MUK1 530 aa23.07■■□□□ 1.28
GTF3C1-207ENST00000567806 FLT3LGP49771 235 aa23.07■■□□□ 1.28
GTF3C1-207ENST00000567806 PABPC4Q13310 644 aaKnown RBP eCLIP23.07■■□□□ 1.285e-7■■■■■ 30.4
GTF3C1-207ENST00000567806 TREML2Q5T2D2 321 aa23.07■■□□□ 1.28
GTF3C1-207ENST00000567806 ANKRD13CQ8N6S4 541 aa23.07■■□□□ 1.28
GTF3C1-207ENST00000567806 DPF3Q92784 378 aa23.07■■□□□ 1.28
GTF3C1-207ENST00000567806 COA7Q96BR5 231 aa23.07■■□□□ 1.28
GTF3C1-207ENST00000567806 DHX36Q9H2U1 1008 aaKnown RBP23.07■■□□□ 1.28
GTF3C1-207ENST00000567806 AATFQ9NY61 560 aaKnown RBP eCLIP23.07■■□□□ 1.28
GTF3C1-207ENST00000567806 COL2A1P02458 1487 aaPredicted RBP23.06■■□□□ 1.28
GTF3C1-207ENST00000567806 SHISA4Q96DD7 197 aa23.06■■□□□ 1.28
GTF3C1-207ENST00000567806 AS3MTQ9HBK9 375 aa23.06■■□□□ 1.28
GTF3C1-207ENST00000567806 H0YGN5 161 aa23.05■■□□□ 1.28
GTF3C1-207ENST00000567806 HMGCS2P54868 508 aa23.05■■□□□ 1.28
GTF3C1-207ENST00000567806 PPP4CP60510 307 aa23.05■■□□□ 1.28
GTF3C1-207ENST00000567806 HNRNPUQ00839 825 aaKnown RBP eCLIP23.05■■□□□ 1.28
GTF3C1-207ENST00000567806 ITPRIPQ8IWB1 547 aa23.05■■□□□ 1.28
GTF3C1-207ENST00000567806 PXYLP1Q8TE99 480 aa23.05■■□□□ 1.28
GTF3C1-207ENST00000567806 TGFBRAP1Q8WUH2 860 aa23.05■■□□□ 1.28
GTF3C1-207ENST00000567806 TRIM34Q9BYJ4 488 aa23.05■■□□□ 1.28
GTF3C1-207ENST00000567806 C1orf115Q9H7X2 142 aa23.05■■□□□ 1.28
GTF3C1-207ENST00000567806 DOCK1Q14185 1865 aa23.05■■□□□ 1.28
GTF3C1-207ENST00000567806 IGSF3O75054 1194 aa23.04■■□□□ 1.28
GTF3C1-207ENST00000567806 CYP2E1P05181 493 aaPredicted RBP23.04■■□□□ 1.28
GTF3C1-207ENST00000567806 GCLCP48506 637 aaPredicted RBP23.04■■□□□ 1.28
GTF3C1-207ENST00000567806 IRF5Q13568 498 aa23.04■■□□□ 1.28
GTF3C1-207ENST00000567806 FOXP4Q8IVH2 680 aaPredicted RBP23.04■■□□□ 1.28
GTF3C1-207ENST00000567806 ZNF512BQ96KM6 892 aaPredicted RBP23.04■■□□□ 1.28
GTF3C1-207ENST00000567806 UNC93B1Q9H1C4 597 aa23.04■■□□□ 1.28
GTF3C1-207ENST00000567806 TAOK2Q9UL54 1235 aa23.04■■□□□ 1.28
GTF3C1-207ENST00000567806 COLQQ9Y215 455 aaPredicted RBP23.04■■□□□ 1.28
GTF3C1-207ENST00000567806 ELNP15502 786 aa23.03■■□□□ 1.28
GTF3C1-207ENST00000567806 RRP1BQ14684 758 aaKnown RBP23.03■■□□□ 1.28
GTF3C1-207ENST00000567806 FAM110CQ1W6H9 321 aa23.03■■□□□ 1.28
GTF3C1-207ENST00000567806 MAPKAPK5Q8IW41 473 aa23.03■■□□□ 1.28
GTF3C1-207ENST00000567806 CRACR2BQ8N4Y2 399 aaPredicted RBP23.03■■□□□ 1.28
GTF3C1-207ENST00000567806 U2AF1L4Q8WU68 220 aaKnown RBP23.03■■□□□ 1.28
GTF3C1-207ENST00000567806 HTATIP2Q9BUP3 242 aa23.03■■□□□ 1.28
GTF3C1-207ENST00000567806 NOP58Q9Y2X3 529 aaKnown RBP23.03■■□□□ 1.28
GTF3C1-207ENST00000567806 ZBTB7BO15156 539 aaPredicted RBP23.02■■□□□ 1.28
GTF3C1-207ENST00000567806 ZAP70P43403 619 aa23.02■■□□□ 1.28
GTF3C1-207ENST00000567806 SGPL1O95470 568 aa23.01■■□□□ 1.27
GTF3C1-207ENST00000567806 INHAP05111 366 aa23.01■■□□□ 1.27
GTF3C1-207ENST00000567806 ASNSP08243 561 aa23.01■■□□□ 1.27
GTF3C1-207ENST00000567806 SH3D19Q5HYK7 790 aa23.01■■□□□ 1.27
GTF3C1-207ENST00000567806 WDR18Q9BV38 432 aa23.01■■□□□ 1.27
GTF3C1-207ENST00000567806 CCDC8Q9H0W5 538 aaPredicted RBP23.01■■□□□ 1.27
GTF3C1-207ENST00000567806 ASCC2Q9H1I8 757 aaPredicted RBP23.01■■□□□ 1.27
GTF3C1-207ENST00000567806 TMOD4Q9NZQ9 345 aa23.01■■□□□ 1.27
GTF3C1-207ENST00000567806 TFRCP02786 760 aaKnown RBP23■■□□□ 1.27
GTF3C1-207ENST00000567806 CAPN2P17655 700 aa23■■□□□ 1.27
GTF3C1-207ENST00000567806 ADGRA1Q86SQ6 560 aa23■■□□□ 1.27
GTF3C1-207ENST00000567806 PIH1D3Q9NQM4 214 aaKnown RBP23■■□□□ 1.27
GTF3C1-207ENST00000567806 PALD1Q9ULE6 856 aa23■■□□□ 1.27
GTF3C1-207ENST00000567806 PHIPQ8WWQ0 1821 aa23■■□□□ 1.27
GTF3C1-207ENST00000567806 MGAMO43451 1857 aa22.99■■□□□ 1.27
GTF3C1-207ENST00000567806 FARP2O94887 1054 aaPredicted RBP22.99■■□□□ 1.27
GTF3C1-207ENST00000567806 CYP7A1P22680 504 aa22.99■■□□□ 1.27
GTF3C1-207ENST00000567806 GINM1Q9NU53 330 aa22.99■■□□□ 1.27
GTF3C1-207ENST00000567806 DBNLQ9UJU6 430 aaKnown RBP22.99■■□□□ 1.27
GTF3C1-207ENST00000567806 FLT1P17948 1338 aa22.99■■□□□ 1.27
GTF3C1-207ENST00000567806 HLA-DOAP06340 250 aa22.98■■□□□ 1.27
GTF3C1-207ENST00000567806 RLBP1P12271 317 aa22.98■■□□□ 1.27
GTF3C1-207ENST00000567806 BACE1P56817 501 aa22.98■■□□□ 1.27
GTF3C1-207ENST00000567806 IRX3P78415 501 aaPredicted RBP22.98■■□□□ 1.27
GTF3C1-207ENST00000567806 MTMR2Q13614 643 aa22.98■■□□□ 1.27
GTF3C1-207ENST00000567806 UBE2Q1Q7Z7E8 422 aa22.98■■□□□ 1.27
GTF3C1-207ENST00000567806 METTL16Q86W50 562 aaKnown RBP22.98■■□□□ 1.27
GTF3C1-207ENST00000567806 SAP30BPQ9UHR5 308 aaKnown RBP22.98■■□□□ 1.27
GTF3C1-207ENST00000567806 NR2E3Q9Y5X4 410 aa22.98■■□□□ 1.27
GTF3C1-207ENST00000567806 PTPRFP10586 1907 aa22.98■■□□□ 1.27
GTF3C1-207ENST00000567806 C19orf81C9J6K1 198 aa22.97■■□□□ 1.27
GTF3C1-207ENST00000567806 IDH1O75874 414 aaKnown RBP22.97■■□□□ 1.27
GTF3C1-207ENST00000567806 FXR1P51114 621 aaKnown RBP eCLIP22.97■■□□□ 1.27
GTF3C1-207ENST00000567806 DYNLL1P63167 89 aaKnown RBP22.97■■□□□ 1.27
GTF3C1-207ENST00000567806 EAF2Q96CJ1 260 aaPredicted RBP22.97■■□□□ 1.27
GTF3C1-207ENST00000567806 DEFB118Q96PH6 123 aa22.97■■□□□ 1.27
GTF3C1-207ENST00000567806 USP17L10C9JJH3 530 aa22.96■■□□□ 1.27
GTF3C1-207ENST00000567806 CERS3Q8IU89 383 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms