RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 KRT71Q3SY84 523 aa13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 NKIRAS1Q9NYS0 192 aa13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 PDE4DQ08499 809 aa13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 SMARCC2Q8TAQ2 1214 aa13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 LSG1Q9H089 658 aaKnown RBP13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 ARHGEF5Q12774 1597 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 ADGRL2O95490 1459 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 NCKAP5LQ9HCH0 1330 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 A0A087WUV0 522 aaPredicted RBP13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 CEP104O60308 925 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 PEX19P40855 299 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 NAPAP54920 295 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 KMT5BQ4FZB7 885 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 CFAP221Q4G0U5 840 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 AKAP4Q5JQC9 854 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 SIRT2Q8IXJ6 389 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 KBTBD3Q8NAB2 608 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 USP44Q9H0E7 712 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 CCDC151A5D8V7 595 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 DESP17661 470 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 MIGA1Q8NAN2 632 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 DDX12PQ92771 950 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 CCDC51Q96ER9 411 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 RIPOR2Q9Y4F9 1068 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 FRMD3A2A2Y4 597 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 TRAF5O00463 557 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 ERCC3P19447 782 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 OR8K1Q8NGG5 319 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 SSH3Q8TE77 659 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 KCNJ14Q9UNX9 436 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 SAMM50Q9Y512 469 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 PHLPP2Q6ZVD8 1323 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 RNF40O75150 1001 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 PPFIA4O75335 1185 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 GIGYF1O75420 1035 aaPredicted RBP13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 PPP1R7Q15435 360 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 KRT79Q5XKE5 535 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 VSIG1Q86XK7 387 aa13.87□□□□□ -0.19
CSPG4P13-202ENST00000567704 ZFYVE16Q7Z3T8 1539 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 E7EWF7 191 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 DEXIO95424 95 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 CMA1P23946 247 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 ALDH3A1P30838 453 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 SLC35F6Q8N357 371 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 PAF1Q8N7H5 531 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 NUP58Q9BVL2 599 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 MAP3K5Q99683 1374 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 GOLGA8KD6RF30 607 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 KCTD16Q68DU8 428 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 STXBP4Q6ZWJ1 553 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 BLZF1Q9H2G9 400 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 PTPRTO14522 1441 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 NPATQ14207 1427 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 FAM135BQ49AJ0 1406 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 TNRQ92752 1358 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 GJC1P36383 396 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 LRCH2Q5VUJ6 765 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 GSTA5Q7RTV2 222 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 NELFBQ8WX92 580 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 STMN2Q93045 179 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 OSBPL3Q9H4L5 887 aa13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 FEZ2Q9UHY8 353 aaPredicted RBP13.86□□□□□ -0.19
CSPG4P13-202ENST00000567704 ZMYND10O75800 440 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 GNAQP50148 359 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 FCHSD1Q86WN1 690 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 CACNA2D3Q8IZS8 1091 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 CRACR2BQ8N4Y2 399 aaPredicted RBP13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 MAGEB6Q8N7X4 407 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 TMEM87BQ96K49 555 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 IFIH1Q9BYX4 1025 aaKnown RBP13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 CRNKL1Q9BZJ0 848 aaKnown RBP13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 FTOQ9C0B1 505 aaKnown RBP eCLIP13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 ZCCHC17Q9NP64 241 aaKnown RBP13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 ADAM21Q9UKJ8 722 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 RTL9Q8NET4 1388 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 PREX2Q70Z35 1606 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 CALM1P0DP23 149 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 CALM2P0DP24 149 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 CALM3P0DP25 149 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 RAD51AP2Q09MP3 1159 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 HELBQ8NG08 1087 aaPredicted RBP13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 SUCLG2Q96I99 432 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 TNIP1Q15025 636 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 ICE2Q659A1 982 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 VEZTQ9HBM0 779 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 CLIC4Q9Y696 253 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 FLT4P35916 1363 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 PFKFB2O60825 505 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 STK38LQ9Y2H1 464 aa13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 UTP11Q9Y3A2 253 aaKnown RBP13.85□□□□□ -0.19
CSPG4P13-202ENST00000567704 LARGE1O95461 756 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 IRX5P78411 483 aaPredicted RBP13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 SLC9C1Q4G0N8 1177 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 TYW1BQ6NUM6 668 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 V9GY48 417 aaPredicted RBP13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 TSPY3P0CV98 308 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 TSPY8P0CW00 308 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 PIK3AP1Q6ZUJ8 805 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 CCDC170Q8IYT3 715 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms