RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 STK36Q9NRP7 1315 aa21.64■■□□□ 1.06
MSLN-207ENST00000566549 CMA1P23946 247 aa21.64■■□□□ 1.05
MSLN-207ENST00000566549 LRMPQ12912 555 aa21.64■■□□□ 1.05
MSLN-207ENST00000566549 PTPAQ15257 358 aa21.64■■□□□ 1.05
MSLN-207ENST00000566549 DPCR1Q3MIW9 517 aa21.64■■□□□ 1.05
MSLN-207ENST00000566549 ISM2Q6H9L7 571 aa21.64■■□□□ 1.05
MSLN-207ENST00000566549 DIS3L2Q8IYB7 885 aaKnown RBP21.64■■□□□ 1.05
MSLN-207ENST00000566549 FNBP4Q8N3X1 1017 aaPredicted RBP21.64■■□□□ 1.05
MSLN-207ENST00000566549 NSUN4Q96CB9 384 aaKnown RBP21.64■■□□□ 1.05
MSLN-207ENST00000566549 MAP3K14Q99558 947 aa21.64■■□□□ 1.05
MSLN-207ENST00000566549 hCG_1642624A0A1W2PR95 340 aa21.64■■□□□ 1.05
MSLN-207ENST00000566549 TPM2P07951 284 aa21.64■■□□□ 1.05
MSLN-207ENST00000566549 NBPF11Q86T75 865 aa21.64■■□□□ 1.05
MSLN-207ENST00000566549 SLC3A2P08195 630 aaKnown RBP21.63■■□□□ 1.05
MSLN-207ENST00000566549 SHC4Q6S5L8 630 aa21.63■■□□□ 1.05
MSLN-207ENST00000566549 NOSTRINQ8IVI9 506 aa21.63■■□□□ 1.05
MSLN-207ENST00000566549 CRACR2BQ8N4Y2 399 aaPredicted RBP21.63■■□□□ 1.05
MSLN-207ENST00000566549 WASF1Q92558 559 aa21.63■■□□□ 1.05
MSLN-207ENST00000566549 USP17L12C9JPN9 530 aa21.63■■□□□ 1.05
MSLN-207ENST00000566549 USP17L21D6R901 530 aa21.63■■□□□ 1.05
MSLN-207ENST00000566549 MMP1P03956 469 aa21.63■■□□□ 1.05
MSLN-207ENST00000566549 TPM3P06753 285 aa21.63■■□□□ 1.05
MSLN-207ENST00000566549 CTR9Q6PD62 1173 aa21.63■■□□□ 1.05
MSLN-207ENST00000566549 TMTC2Q8N394 836 aa21.63■■□□□ 1.05
MSLN-207ENST00000566549 ENAHQ8N8S7 591 aaPredicted RBP21.63■■□□□ 1.05
MSLN-207ENST00000566549 ANAPC4Q9UJX5 808 aa21.63■■□□□ 1.05
MSLN-207ENST00000566549 SCN7AQ01118 1682 aa21.62■■□□□ 1.05
MSLN-207ENST00000566549 SYKP43405 635 aa21.62■■□□□ 1.05
MSLN-207ENST00000566549 NR5A1Q13285 461 aa21.62■■□□□ 1.05
MSLN-207ENST00000566549 SEC23AQ15436 765 aa21.62■■□□□ 1.05
MSLN-207ENST00000566549 KIAA1524Q8TCG1 905 aa21.62■■□□□ 1.05
MSLN-207ENST00000566549 ZSCAN10Q96SZ4 725 aaPredicted RBP21.62■■□□□ 1.05
MSLN-207ENST00000566549 CHD4Q14839 1912 aa21.62■■□□□ 1.05
MSLN-207ENST00000566549 ATP2B1P20020 1258 aa21.61■■□□□ 1.05
MSLN-207ENST00000566549 RFC4P35249 363 aa21.61■■□□□ 1.05
MSLN-207ENST00000566549 SAFBQ15424 915 aaKnown RBP eCLIP21.61■■□□□ 1.05
MSLN-207ENST00000566549 CCDC144BQ3MJ40 725 aa21.61■■□□□ 1.05
MSLN-207ENST00000566549 SPECC1Q5M775 1068 aa21.61■■□□□ 1.05
MSLN-207ENST00000566549 CACNA1SQ13698 1873 aa21.61■■□□□ 1.05
MSLN-207ENST00000566549 UQCRHLA0A096LP55 91 aa21.61■■□□□ 1.05
MSLN-207ENST00000566549 UQCRHP07919 91 aa21.61■■□□□ 1.05
MSLN-207ENST00000566549 JMYQ8N9B5 988 aa21.61■■□□□ 1.05
MSLN-207ENST00000566549 BRIP1Q9BX63 1249 aa21.61■■□□□ 1.05
MSLN-207ENST00000566549 ANKRD2Q9GZV1 360 aa21.61■■□□□ 1.05
MSLN-207ENST00000566549 CCDC196A0A1B0GTZ2 297 aa21.6■■□□□ 1.05
MSLN-207ENST00000566549 DEXIO95424 95 aa21.6■■□□□ 1.05
MSLN-207ENST00000566549 TM4SF1P30408 202 aa21.6■■□□□ 1.05
MSLN-207ENST00000566549 IFIT1BQ5T764 474 aaKnown RBP21.6■■□□□ 1.05
MSLN-207ENST00000566549 ANKIB1Q9P2G1 1089 aa21.6■■□□□ 1.05
MSLN-207ENST00000566549 NID2Q14112 1375 aa21.6■■□□□ 1.05
MSLN-207ENST00000566549 PPP6R2O75170 966 aa21.6■■□□□ 1.05
MSLN-207ENST00000566549 CYP2D6P10635 497 aa21.6■■□□□ 1.05
MSLN-207ENST00000566549 RGS22Q8NE09 1264 aa21.6■■□□□ 1.05
MSLN-207ENST00000566549 OXER1Q8TDS5 423 aa21.6■■□□□ 1.05
MSLN-207ENST00000566549 NAT10Q9H0A0 1025 aaKnown RBP21.6■■□□□ 1.05
MSLN-207ENST00000566549 NMT2O60551 498 aa21.59■■□□□ 1.05
MSLN-207ENST00000566549 FAM196AQ6ZSG2 479 aa21.59■■□□□ 1.05
MSLN-207ENST00000566549 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.59■■□□□ 1.05
MSLN-207ENST00000566549 ECM29Q5VYK3 1845 aa21.59■■□□□ 1.05
MSLN-207ENST00000566549 FAM47AQ5JRC9 791 aa21.59■■□□□ 1.05
MSLN-207ENST00000566549 GPR101Q96P66 508 aaPredicted RBP21.59■■□□□ 1.05
MSLN-207ENST00000566549 A0A1B0GUL6 1792 aa21.59■■□□□ 1.05
MSLN-207ENST00000566549 BTAF1O14981 1849 aa21.59■■□□□ 1.05
MSLN-207ENST00000566549 SEMA3EO15041 775 aa21.58■■□□□ 1.05
MSLN-207ENST00000566549 TOB1P50616 345 aaPredicted RBP21.58■■□□□ 1.05
MSLN-207ENST00000566549 TRAPPC3LQ5T215 181 aa21.58■■□□□ 1.05
MSLN-207ENST00000566549 MTA3Q9BTC8 594 aa21.58■■□□□ 1.05
MSLN-207ENST00000566549 SPTLC3Q9NUV7 552 aa21.58■■□□□ 1.05
MSLN-207ENST00000566549 VPS54Q9P1Q0 977 aa21.58■■□□□ 1.05
MSLN-207ENST00000566549 ZNF831Q5JPB2 1677 aa21.58■■□□□ 1.05
MSLN-207ENST00000566549 EP400Q96L91 3159 aa21.58■■□□□ 1.04
MSLN-207ENST00000566549 PLEKHA8P1O95397 391 aa21.58■■□□□ 1.04
MSLN-207ENST00000566549 GRIN1Q05586 938 aa21.58■■□□□ 1.04
MSLN-207ENST00000566549 SARM1Q6SZW1 724 aa21.58■■□□□ 1.04
MSLN-207ENST00000566549 IQCA1Q86XH1 822 aa21.58■■□□□ 1.04
MSLN-207ENST00000566549 DCP1AQ9NPI6 582 aaPredicted RBP21.58■■□□□ 1.04
MSLN-207ENST00000566549 AKAP17AQ02040 695 aaKnown RBP21.57■■□□□ 1.04
MSLN-207ENST00000566549 NFIXQ14938 502 aa21.57■■□□□ 1.04
MSLN-207ENST00000566549 CATIPQ7Z7H3 387 aa21.57■■□□□ 1.04
MSLN-207ENST00000566549 HPSEQ9Y251 543 aa21.57■■□□□ 1.04
MSLN-207ENST00000566549 CASZ1Q86V15 1759 aa21.57■■□□□ 1.04
MSLN-207ENST00000566549 RGL2O15211 777 aa21.57■■□□□ 1.04
MSLN-207ENST00000566549 PNOCQ13519 176 aa21.57■■□□□ 1.04
MSLN-207ENST00000566549 ARID5BQ14865 1188 aa21.57■■□□□ 1.04
MSLN-207ENST00000566549 MEX3CQ5U5Q3 659 aaKnown RBP21.57■■□□□ 1.04
MSLN-207ENST00000566549 RESP18Q5W5W9 173 aa21.57■■□□□ 1.04
MSLN-207ENST00000566549 SHISA4Q96DD7 197 aa21.57■■□□□ 1.04
MSLN-207ENST00000566549 CRNKL1Q9BZJ0 848 aaKnown RBP21.57■■□□□ 1.04
MSLN-207ENST00000566549 FILIP1Q7Z7B0 1213 aa21.56■■□□□ 1.04
MSLN-207ENST00000566549 DZIP1Q86YF9 867 aaKnown RBP21.56■■□□□ 1.04
MSLN-207ENST00000566549 CACTINQ8WUQ7 758 aaKnown RBP21.56■■□□□ 1.04
MSLN-207ENST00000566549 PCDHB6Q9Y5E3 794 aa21.56■■□□□ 1.04
MSLN-207ENST00000566549 DUOX1Q9NRD9 1551 aa21.56■■□□□ 1.04
MSLN-207ENST00000566549 CABP5Q9NP86 173 aa21.56■■□□□ 1.04
MSLN-207ENST00000566549 BAZ2AQ9UIF9 1905 aaKnown RBP21.56■■□□□ 1.04
MSLN-207ENST00000566549 FAM205CA6NFA0 338 aa21.55■■□□□ 1.04
MSLN-207ENST00000566549 TERF1P54274 439 aa21.55■■□□□ 1.04
MSLN-207ENST00000566549 LONRF3Q496Y0 759 aa21.55■■□□□ 1.04
MSLN-207ENST00000566549 KRI1Q8N9T8 703 aaKnown RBP21.55■■□□□ 1.04
MSLN-207ENST00000566549 CNBD1Q8NA66 436 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms