RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 MAPK8P45983 427 aa7.58□□□□□ -1.2
CHD9-215ENST00000565442 RPS26P11Q5JNZ5 115 aaPredicted RBP7.58□□□□□ -1.2
CHD9-215ENST00000565442 FYB2Q5VWT5 728 aa7.58□□□□□ -1.2
CHD9-215ENST00000565442 GIPC2Q8TF65 315 aa7.58□□□□□ -1.2
CHD9-215ENST00000565442 HEXIM2Q96MH2 286 aaKnown RBP7.58□□□□□ -1.2
CHD9-215ENST00000565442 ABCB6Q9NP58 842 aa7.58□□□□□ -1.2
CHD9-215ENST00000565442 NPHS2Q9NP85 383 aa7.58□□□□□ -1.2
CHD9-215ENST00000565442 NEFMP07197 916 aa7.57□□□□□ -1.2
CHD9-215ENST00000565442 GLI1P08151 1106 aa7.57□□□□□ -1.2
CHD9-215ENST00000565442 GSTP1P09211 210 aaKnown RBP7.57□□□□□ -1.2
CHD9-215ENST00000565442 AFMP43652 599 aa7.57□□□□□ -1.2
CHD9-215ENST00000565442 ZNF157P51786 506 aaPredicted RBP7.57□□□□□ -1.2
CHD9-215ENST00000565442 DSC3Q14574 896 aa7.57□□□□□ -1.2
CHD9-215ENST00000565442 EAPPQ56P03 285 aaPredicted RBP7.57□□□□□ -1.2
CHD9-215ENST00000565442 PRR23BQ6ZRT6 265 aa7.57□□□□□ -1.2
CHD9-215ENST00000565442 TTLL10Q6ZVT0 673 aa7.57□□□□□ -1.2
CHD9-215ENST00000565442 FBXO33Q7Z6M2 555 aa7.57□□□□□ -1.2
CHD9-215ENST00000565442 ISL2Q96A47 359 aa7.57□□□□□ -1.2
CHD9-215ENST00000565442 RBM47A0AV96 593 aaKnown RBP7.56□□□□□ -1.2
CHD9-215ENST00000565442 NEFLP07196 543 aa7.56□□□□□ -1.2
CHD9-215ENST00000565442 ZNF16P17020 682 aaPredicted RBP7.56□□□□□ -1.2
CHD9-215ENST00000565442 FMR1Q06787 632 aaKnown RBP eCLIP7.56□□□□□ -1.2
CHD9-215ENST00000565442 FAAP100Q0VG06 881 aa7.56□□□□□ -1.2
CHD9-215ENST00000565442 ORC1Q13415 861 aa7.56□□□□□ -1.2
CHD9-215ENST00000565442 PRPF40BQ6NWY9 871 aaKnown RBP7.56□□□□□ -1.2
CHD9-215ENST00000565442 MPZL3Q6UWV2 235 aa7.56□□□□□ -1.2
CHD9-215ENST00000565442 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.56□□□□□ -1.2
CHD9-215ENST00000565442 SPACA3Q8IXA5 215 aa7.56□□□□□ -1.2
CHD9-215ENST00000565442 SSU72Q9NP77 194 aaKnown RBP7.56□□□□□ -1.2
CHD9-215ENST00000565442 RAPGEFL1Q9UHV5 662 aa7.56□□□□□ -1.2
CHD9-215ENST00000565442 KRT1P04264 644 aa7.55□□□□□ -1.2
CHD9-215ENST00000565442 C1QTNF9P0C862 333 aa7.55□□□□□ -1.2
CHD9-215ENST00000565442 BUD31P41223 144 aaPredicted RBP7.55□□□□□ -1.2
CHD9-215ENST00000565442 ALKBH8Q96BT7 664 aaKnown RBP7.55□□□□□ -1.2
CHD9-215ENST00000565442 KRTAP9-3Q9BYQ3 159 aa7.55□□□□□ -1.2
CHD9-215ENST00000565442 GTF2IRD1Q9UHL9 959 aa7.55□□□□□ -1.2
CHD9-215ENST00000565442 UNCXA6NJT0 531 aa7.54□□□□□ -1.2
CHD9-215ENST00000565442 IGF2BP3O00425 579 aaKnown RBP eCLIP7.54□□□□□ -1.2
CHD9-215ENST00000565442 FAM214BQ7L5A3 538 aa7.54□□□□□ -1.2
CHD9-215ENST00000565442 KIRREL1Q96J84 757 aa7.54□□□□□ -1.2
CHD9-215ENST00000565442 WWC3Q9ULE0 1092 aa7.54□□□□□ -1.2
CHD9-215ENST00000565442 PNMA6FA0A0J9YX94 578 aa7.53□□□□□ -1.2
CHD9-215ENST00000565442 TMEM238LA0A1B0GVL6 79 aa7.53□□□□□ -1.2
CHD9-215ENST00000565442 NFIBO00712 420 aa7.53□□□□□ -1.2
CHD9-215ENST00000565442 CPNE3O75131 537 aaKnown RBP7.53□□□□□ -1.2
CHD9-215ENST00000565442 LDHBP07195 334 aaKnown RBP7.53□□□□□ -1.2
CHD9-215ENST00000565442 ZNF326Q5BKZ1 582 aaKnown RBP7.53□□□□□ -1.2
CHD9-215ENST00000565442 RNF214Q8ND24 703 aa7.53□□□□□ -1.2
CHD9-215ENST00000565442 SETDB2Q96T68 719 aa7.53□□□□□ -1.2
CHD9-215ENST00000565442 PITPNM2Q9BZ72 1349 aa7.52□□□□□ -1.2
CHD9-215ENST00000565442 EIF1AYO14602 144 aaKnown RBP7.52□□□□□ -1.21
CHD9-215ENST00000565442 NKPD1Q17RQ9 610 aa7.52□□□□□ -1.21
CHD9-215ENST00000565442 TMEM67Q5HYA8 995 aa7.52□□□□□ -1.21
CHD9-215ENST00000565442 CYFIP1Q7L576 1253 aa7.52□□□□□ -1.21
CHD9-215ENST00000565442 PDZD3Q86UT5 571 aa7.52□□□□□ -1.21
CHD9-215ENST00000565442 FBXO15Q8NCQ5 510 aaPredicted RBP7.52□□□□□ -1.21
CHD9-215ENST00000565442 KCNB2Q92953 911 aa7.52□□□□□ -1.21
CHD9-215ENST00000565442 CSRNP1Q96S65 589 aa7.52□□□□□ -1.21
CHD9-215ENST00000565442 CLCN7P51798 805 aa7.51□□□□□ -1.21
CHD9-215ENST00000565442 ERVK-24P63145 666 aa7.51□□□□□ -1.21
CHD9-215ENST00000565442 ENOX2Q16206 610 aaKnown RBP7.51□□□□□ -1.21
CHD9-215ENST00000565442 ZC3H12AQ5D1E8 599 aaKnown RBP7.51□□□□□ -1.21
CHD9-215ENST00000565442 GADD45BO75293 160 aaPredicted RBP7.5□□□□□ -1.21
CHD9-215ENST00000565442 ATP2B2Q01814 1243 aa7.5□□□□□ -1.21
CHD9-215ENST00000565442 AMIGO3Q86WK7 504 aa7.5□□□□□ -1.21
CHD9-215ENST00000565442 RNF19AQ9NV58 838 aa7.5□□□□□ -1.21
CHD9-215ENST00000565442 TRAK1Q9UPV9 953 aa7.5□□□□□ -1.21
CHD9-215ENST00000565442 GNAT3A8MTJ3 354 aa7.49□□□□□ -1.21
CHD9-215ENST00000565442 NPIPB6E9PJ23 425 aa7.49□□□□□ -1.21
CHD9-215ENST00000565442 PRPF40AO75400 957 aaKnown RBP7.49□□□□□ -1.21
CHD9-215ENST00000565442 PPP2R3AQ06190 1150 aa7.49□□□□□ -1.21
CHD9-215ENST00000565442 MRRFQ96E11 262 aaKnown RBP7.49□□□□□ -1.21
CHD9-215ENST00000565442 DUSP9Q99956 384 aaKnown RBP7.49□□□□□ -1.21
CHD9-215ENST00000565442 NSUN3Q9H649 340 aaKnown RBP7.49□□□□□ -1.21
CHD9-215ENST00000565442 CARS2Q9HA77 564 aaKnown RBP7.49□□□□□ -1.21
CHD9-215ENST00000565442 PRDM10Q9NQV6 1147 aa7.49□□□□□ -1.21
CHD9-215ENST00000565442 TMEM39AQ9NV64 488 aa7.49□□□□□ -1.21
CHD9-215ENST00000565442 GPN3Q9UHW5 284 aaPredicted RBP7.49□□□□□ -1.21
CHD9-215ENST00000565442 E9PSI1 815 aa7.48□□□□□ -1.21
CHD9-215ENST00000565442 INHBBP09529 407 aa7.48□□□□□ -1.21
CHD9-215ENST00000565442 CCDC74AQ96AQ1 378 aa7.48□□□□□ -1.21
CHD9-215ENST00000565442 FAM161BQ96MY7 647 aa7.48□□□□□ -1.21
CHD9-215ENST00000565442 DIRC2Q96SL1 478 aa7.48□□□□□ -1.21
CHD9-215ENST00000565442 DNAJC25Q9H1X3 360 aa7.48□□□□□ -1.21
CHD9-215ENST00000565442 C19orf73Q9NVV2 129 aa7.48□□□□□ -1.21
CHD9-215ENST00000565442 GDNFP39905 211 aa7.47□□□□□ -1.21
CHD9-215ENST00000565442 GRM2Q14416 872 aa7.47□□□□□ -1.21
CHD9-215ENST00000565442 ALG1LQ6GMV1 187 aa7.47□□□□□ -1.21
CHD9-215ENST00000565442 SULF2Q8IWU5 870 aa7.47□□□□□ -1.21
CHD9-215ENST00000565442 CD320Q9NPF0 282 aa7.47□□□□□ -1.21
CHD9-215ENST00000565442 KIAA1522Q9P206 1035 aaPredicted RBP7.47□□□□□ -1.21
CHD9-215ENST00000565442 PARP2Q9UGN5 583 aa7.47□□□□□ -1.21
CHD9-215ENST00000565442 TMEM253P0C7T8 217 aa7.46□□□□□ -1.22
CHD9-215ENST00000565442 XPCQ01831 940 aaPredicted RBP7.46□□□□□ -1.22
CHD9-215ENST00000565442 KCNA10Q16322 511 aa7.46□□□□□ -1.22
CHD9-215ENST00000565442 PI16Q6UXB8 463 aa7.46□□□□□ -1.22
CHD9-215ENST00000565442 DTHD1Q6ZMT9 781 aa7.46□□□□□ -1.22
CHD9-215ENST00000565442 STK35Q8TDR2 534 aa7.46□□□□□ -1.22
CHD9-215ENST00000565442 RANGAP1P46060 587 aaPredicted RBP7.45□□□□□ -1.22
CHD9-215ENST00000565442 CTSWP56202 376 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms