RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 METTL16Q86W50 562 aaKnown RBP10.56□□□□□ -0.72
CAPN3-213ENST00000565173 ZNF512BQ96KM6 892 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-213ENST00000565173 DBNDD2Q9BQY9 259 aa10.56□□□□□ -0.72
CAPN3-213ENST00000565173 SNRKQ9NRH2 765 aa10.56□□□□□ -0.72
CAPN3-213ENST00000565173 LRP2BPQ9P2M1 347 aa10.56□□□□□ -0.72
CAPN3-213ENST00000565173 AGTPBP1Q9UPW5 1226 aa10.56□□□□□ -0.72
CAPN3-213ENST00000565173 NOP58Q9Y2X3 529 aaKnown RBP10.56□□□□□ -0.72
CAPN3-213ENST00000565173 FPGT-TNNI3KV9GXZ4 949 aa10.56□□□□□ -0.72
CAPN3-213ENST00000565173 MGAMO43451 1857 aa10.55□□□□□ -0.72
CAPN3-213ENST00000565173 GJB1P08034 283 aa10.55□□□□□ -0.72
CAPN3-213ENST00000565173 CCL5P13501 91 aa10.55□□□□□ -0.72
CAPN3-213ENST00000565173 CAP2P40123 477 aa10.55□□□□□ -0.72
CAPN3-213ENST00000565173 GJA8P48165 433 aa10.55□□□□□ -0.72
CAPN3-213ENST00000565173 FLT3LGP49771 235 aa10.55□□□□□ -0.72
CAPN3-213ENST00000565173 JAG1P78504 1218 aa10.55□□□□□ -0.72
CAPN3-213ENST00000565173 SPP2Q13103 211 aa10.55□□□□□ -0.72
CAPN3-213ENST00000565173 TEX11Q8IYF3 940 aa10.55□□□□□ -0.72
CAPN3-213ENST00000565173 ZNF280CQ8ND82 737 aa10.55□□□□□ -0.72
CAPN3-213ENST00000565173 C1orf115Q9H7X2 142 aa10.55□□□□□ -0.72
CAPN3-213ENST00000565173 SURF6O75683 361 aaKnown RBP10.54□□□□□ -0.72
CAPN3-213ENST00000565173 IRF5Q13568 498 aa10.54□□□□□ -0.72
CAPN3-213ENST00000565173 SH3D19Q5HYK7 790 aa10.54□□□□□ -0.72
CAPN3-213ENST00000565173 CCDC158Q5M9N0 1113 aa10.54□□□□□ -0.72
CAPN3-213ENST00000565173 TTC39AQ5SRH9 613 aa10.54□□□□□ -0.72
CAPN3-213ENST00000565173 NAA16Q6N069 864 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-213ENST00000565173 ANKRD13CQ8N6S4 541 aa10.54□□□□□ -0.72
CAPN3-213ENST00000565173 PROCA1Q8NCQ7 364 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-213ENST00000565173 SLAIN1Q8ND83 568 aa10.54□□□□□ -0.72
CAPN3-213ENST00000565173 EAF2Q96CJ1 260 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-213ENST00000565173 DNAJC18Q9H819 358 aa10.54□□□□□ -0.72
CAPN3-213ENST00000565173 AATFQ9NY61 560 aaKnown RBP eCLIP10.54□□□□□ -0.72
CAPN3-213ENST00000565173 PI4KBQ9UBF8 816 aa10.54□□□□□ -0.72
CAPN3-213ENST00000565173 HERC5Q9UII4 1024 aaKnown RBP10.54□□□□□ -0.72
CAPN3-213ENST00000565173 DBNLQ9UJU6 430 aaKnown RBP10.54□□□□□ -0.72
CAPN3-213ENST00000565173 SIPA1L1O43166 1804 aa10.54□□□□□ -0.72
CAPN3-213ENST00000565173 USP17L5A8MUK1 530 aa10.53□□□□□ -0.72
CAPN3-213ENST00000565173 H0YGN5 161 aa10.53□□□□□ -0.72
CAPN3-213ENST00000565173 TNPO2O14787 897 aaKnown RBP10.53□□□□□ -0.72
CAPN3-213ENST00000565173 ADCY3O60266 1144 aa10.53□□□□□ -0.72
CAPN3-213ENST00000565173 BAG3O95817 575 aa10.53□□□□□ -0.72
CAPN3-213ENST00000565173 ZAP70P43403 619 aa10.53□□□□□ -0.72
CAPN3-213ENST00000565173 HMGCS2P54868 508 aa10.53□□□□□ -0.72
CAPN3-213ENST00000565173 MIER1Q8N108 512 aa10.53□□□□□ -0.72
CAPN3-213ENST00000565173 NKX2-3Q8TAU0 364 aa10.53□□□□□ -0.72
CAPN3-213ENST00000565173 PXYLP1Q8TE99 480 aa10.53□□□□□ -0.72
CAPN3-213ENST00000565173 SMCR8Q8TEV9 937 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-213ENST00000565173 TGFBRAP1Q8WUH2 860 aa10.53□□□□□ -0.72
CAPN3-213ENST00000565173 WDR18Q9BV38 432 aa10.53□□□□□ -0.72
CAPN3-213ENST00000565173 TBC1D2Q9BYX2 928 aa10.53□□□□□ -0.72
CAPN3-213ENST00000565173 RNF208Q9H0X6 261 aa10.53□□□□□ -0.72
CAPN3-213ENST00000565173 UNC93B1Q9H1C4 597 aa10.53□□□□□ -0.72
CAPN3-213ENST00000565173 DHX36Q9H2U1 1008 aaKnown RBP10.53□□□□□ -0.72
CAPN3-213ENST00000565173 PIH1D3Q9NQM4 214 aaKnown RBP10.53□□□□□ -0.72
CAPN3-213ENST00000565173 TLR7Q9NYK1 1049 aaKnown RBP10.53□□□□□ -0.72
CAPN3-213ENST00000565173 COLQQ9Y215 455 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-213ENST00000565173 CEP290O15078 2479 aa10.52□□□□□ -0.72
CAPN3-213ENST00000565173 LAMA3Q16787 3333 aa10.52□□□□□ -0.73
CAPN3-213ENST00000565173 IGSF3O75054 1194 aa10.52□□□□□ -0.73
CAPN3-213ENST00000565173 INHAP05111 366 aa10.52□□□□□ -0.73
CAPN3-213ENST00000565173 ELNP15502 786 aa10.52□□□□□ -0.73
CAPN3-213ENST00000565173 PLCG2P16885 1265 aa10.52□□□□□ -0.73
CAPN3-213ENST00000565173 FXR1P51114 621 aaKnown RBP eCLIP10.52□□□□□ -0.73
CAPN3-213ENST00000565173 UBXN2AP68543 259 aa10.52□□□□□ -0.73
CAPN3-213ENST00000565173 HNRNPUQ00839 825 aaKnown RBP eCLIP10.52□□□□□ -0.73
CAPN3-213ENST00000565173 FAM110CQ1W6H9 321 aa10.52□□□□□ -0.73
CAPN3-213ENST00000565173 SHROOM1Q2M3G4 852 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-213ENST00000565173 FOXP4Q8IVH2 680 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-213ENST00000565173 MAPKAPK5Q8IW41 473 aa10.52□□□□□ -0.73
CAPN3-213ENST00000565173 ITPRIPQ8IWB1 547 aa10.52□□□□□ -0.73
CAPN3-213ENST00000565173 U2AF1L4Q8WU68 220 aaKnown RBP10.52□□□□□ -0.73
CAPN3-213ENST00000565173 CCDC8Q9H0W5 538 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-213ENST00000565173 ASCC2Q9H1I8 757 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-213ENST00000565173 BIN2Q9UBW5 565 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-213ENST00000565173 GJD2Q9UKL4 321 aa10.52□□□□□ -0.73
CAPN3-213ENST00000565173 PNMA3Q9UL41 463 aa10.52□□□□□ -0.73
CAPN3-213ENST00000565173 PALD1Q9ULE6 856 aa10.52□□□□□ -0.73
CAPN3-213ENST00000565173 MYO5AQ9Y4I1 1855 aaKnown RBP10.52□□□□□ -0.73
CAPN3-213ENST00000565173 FLT1P17948 1338 aa10.52□□□□□ -0.73
CAPN3-213ENST00000565173 LOC285556D6RIA3 1793 aa10.52□□□□□ -0.73
CAPN3-213ENST00000565173 ATAD5Q96QE3 1844 aa10.51□□□□□ -0.73
CAPN3-213ENST00000565173 SGPL1O95470 568 aa10.51□□□□□ -0.73
CAPN3-213ENST00000565173 GCLCP48506 637 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-213ENST00000565173 DYNLL1P63167 89 aaKnown RBP10.51□□□□□ -0.73
CAPN3-213ENST00000565173 OS9Q13438 667 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-213ENST00000565173 CEP85Q6P2H3 762 aa10.51□□□□□ -0.73
CAPN3-213ENST00000565173 FTSJ3Q8IY81 847 aaKnown RBP10.51□□□□□ -0.73
CAPN3-213ENST00000565173 NOL10Q9BSC4 688 aaKnown RBP10.51□□□□□ -0.73
CAPN3-213ENST00000565173 PAK6Q9NQU5 681 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-213ENST00000565173 DOCK3Q8IZD9 2030 aa10.51□□□□□ -0.73
CAPN3-213ENST00000565173 CDK5RAP2Q96SN8 1893 aa10.51□□□□□ -0.73
CAPN3-213ENST00000565173 DNAH12Q6ZR08 3092 aa10.5□□□□□ -0.73
CAPN3-213ENST00000565173 MAST2Q6P0Q8 1798 aa10.5□□□□□ -0.73
CAPN3-213ENST00000565173 FOCADQ5VW36 1801 aa10.5□□□□□ -0.73
CAPN3-213ENST00000565173 ASNSP08243 561 aa10.5□□□□□ -0.73
CAPN3-213ENST00000565173 HOXA7P31268 230 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-213ENST00000565173 BACE1P56817 501 aa10.5□□□□□ -0.73
CAPN3-213ENST00000565173 MTMR2Q13614 643 aa10.5□□□□□ -0.73
CAPN3-213ENST00000565173 POTEEQ6S8J3 1075 aa10.5□□□□□ -0.73
CAPN3-213ENST00000565173 DPF3Q92784 378 aa10.5□□□□□ -0.73
CAPN3-213ENST00000565173 COA7Q96BR5 231 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms