RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 RBM26Q5T8P6 1007 aaKnown RBP14.89□□□□□ -0.03
NSMCE1-208ENST00000565070 USP50Q70EL3 339 aaPredicted RBP14.89□□□□□ -0.03
NSMCE1-208ENST00000565070 SAMD7Q7Z3H4 446 aa14.89□□□□□ -0.03
NSMCE1-208ENST00000565070 AMOTL1Q8IY63 956 aa14.89□□□□□ -0.03
NSMCE1-208ENST00000565070 CHAMP1Q96JM3 812 aa14.89□□□□□ -0.03
NSMCE1-208ENST00000565070 IDI2Q9BXS1 227 aa14.89□□□□□ -0.03
NSMCE1-208ENST00000565070 TDRD3Q9H7E2 651 aaKnown RBP14.89□□□□□ -0.03
NSMCE1-208ENST00000565070 ISY1Q9ULR0 285 aaKnown RBP14.89□□□□□ -0.03
NSMCE1-208ENST00000565070 MTMR6Q9Y217 621 aa14.89□□□□□ -0.03
NSMCE1-208ENST00000565070 GSG1L2A8MUP6 293 aa14.88□□□□□ -0.03
NSMCE1-208ENST00000565070 F13A1P00488 732 aa14.88□□□□□ -0.03
NSMCE1-208ENST00000565070 TNFAIP1Q13829 316 aa14.88□□□□□ -0.03
NSMCE1-208ENST00000565070 TGFBRAP1Q8WUH2 860 aa14.88□□□□□ -0.03
NSMCE1-208ENST00000565070 BRF1Q92994 677 aa14.88□□□□□ -0.03
NSMCE1-208ENST00000565070 NBPF3Q9H094 633 aa14.88□□□□□ -0.03
NSMCE1-208ENST00000565070 NAPBQ9H115 298 aa14.88□□□□□ -0.03
NSMCE1-208ENST00000565070 ZNF70Q9UC06 446 aaPredicted RBP14.88□□□□□ -0.03
NSMCE1-208ENST00000565070 PCDHAC2Q9Y5I4 1007 aa14.88□□□□□ -0.03
NSMCE1-208ENST00000565070 MYH1P12882 1939 aa14.87□□□□□ -0.03
NSMCE1-208ENST00000565070 PRKAB2O43741 272 aa14.87□□□□□ -0.03
NSMCE1-208ENST00000565070 PFKFB2O60825 505 aa14.87□□□□□ -0.03
NSMCE1-208ENST00000565070 PDCP20941 246 aa14.87□□□□□ -0.03
NSMCE1-208ENST00000565070 EPHX2P34913 555 aa14.87□□□□□ -0.03
NSMCE1-208ENST00000565070 TDO2P48775 406 aa14.87□□□□□ -0.03
NSMCE1-208ENST00000565070 L1TD1Q5T7N2 865 aaKnown RBP14.87□□□□□ -0.03
NSMCE1-208ENST00000565070 PNMA8AQ86V59 439 aaPredicted RBP14.87□□□□□ -0.03
NSMCE1-208ENST00000565070 IFNL3Q8IZI9 196 aa14.87□□□□□ -0.03
NSMCE1-208ENST00000565070 SDR42E1Q8WUS8 393 aa14.87□□□□□ -0.03
NSMCE1-208ENST00000565070 ATP6V1DQ9Y5K8 247 aa14.87□□□□□ -0.03
NSMCE1-208ENST00000565070 BAZ2AQ9UIF9 1905 aaKnown RBP14.87□□□□□ -0.03
NSMCE1-208ENST00000565070 FLT1P17948 1338 aa14.87□□□□□ -0.03
NSMCE1-208ENST00000565070 GOLGA6L3A6NEY3 463 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 ENTPD3O75355 529 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 WDHD1O75717 1129 aaPredicted RBP14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 TNNI2P48788 182 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 NBPF9Q3BBW0 867 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 TMEM87AQ8NBN3 555 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 GPT2Q8TD30 523 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 LRRC2Q9BYS8 371 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 DCP1AQ9NPI6 582 aaPredicted RBP14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 ARPP21Q9UBL0 812 aaPredicted RBP14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 WDR19Q8NEZ3 1342 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 PITPNM2Q9BZ72 1349 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 COL2A1P02458 1487 aaPredicted RBP14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 ZNF213O14771 459 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 VEGFAP15692 232 aaPredicted RBP14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 EVCP57679 992 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 FGD1P98174 961 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 STK3Q13188 491 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 APOBEC3FQ8IUX4 373 aaKnown RBP14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 MB21D2Q8IYB1 491 aaPredicted RBP14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 NKX2-3Q8TAU0 364 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 TRPM4Q8TD43 1214 aa14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 ZC3H15Q8WU90 426 aaKnown RBP14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 LLPHQ9BRT6 129 aaKnown RBP14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 TAF1DQ9H5J8 278 aaPredicted RBP14.86□□□□□ -0.03
NSMCE1-208ENST00000565070 LAMB1P07942 1786 aa14.85□□□□□ -0.03
NSMCE1-208ENST00000565070 DDX60LQ5H9U9 1706 aaKnown RBP14.85□□□□□ -0.03
NSMCE1-208ENST00000565070 CLRN2A0PK11 232 aa14.85□□□□□ -0.03
NSMCE1-208ENST00000565070 EGFRP00533 1210 aa14.85□□□□□ -0.03
NSMCE1-208ENST00000565070 HAND2P61296 217 aa14.85□□□□□ -0.03
NSMCE1-208ENST00000565070 PICALMQ13492 652 aa14.85□□□□□ -0.03
NSMCE1-208ENST00000565070 LARP1BQ659C4 914 aaKnown RBP14.85□□□□□ -0.03
NSMCE1-208ENST00000565070 FAM83AQ86UY5 434 aa14.85□□□□□ -0.03
NSMCE1-208ENST00000565070 MAPKAPK5Q8IW41 473 aa14.85□□□□□ -0.03
NSMCE1-208ENST00000565070 VEZTQ9HBM0 779 aa14.85□□□□□ -0.03
NSMCE1-208ENST00000565070 MCM9Q9NXL9 1143 aa14.85□□□□□ -0.03
NSMCE1-208ENST00000565070 MKRN1Q9UHC7 482 aaKnown RBP14.85□□□□□ -0.03
NSMCE1-208ENST00000565070 MBD3O95983 291 aa14.84□□□□□ -0.03
NSMCE1-208ENST00000565070 SCRN1Q12765 414 aa14.84□□□□□ -0.03
NSMCE1-208ENST00000565070 SBK1Q52WX2 424 aa14.84□□□□□ -0.03
NSMCE1-208ENST00000565070 NCOA7Q8NI08 942 aa14.84□□□□□ -0.03
NSMCE1-208ENST00000565070 ZNF274Q96GC6 653 aaPredicted RBP14.84□□□□□ -0.03
NSMCE1-208ENST00000565070 OSBPL5Q9H0X9 879 aaPredicted RBP14.84□□□□□ -0.03
NSMCE1-208ENST00000565070 DHX36Q9H2U1 1008 aaKnown RBP14.84□□□□□ -0.03
NSMCE1-208ENST00000565070 TAOK2Q9UL54 1235 aa14.84□□□□□ -0.03
NSMCE1-208ENST00000565070 TACC3Q9Y6A5 838 aa14.84□□□□□ -0.03
NSMCE1-208ENST00000565070 MCM5P33992 734 aa14.84□□□□□ -0.03
NSMCE1-208ENST00000565070 APOBRQ0VD83 1088 aa14.84□□□□□ -0.03
NSMCE1-208ENST00000565070 TTC6Q86TZ1 520 aa14.84□□□□□ -0.03
NSMCE1-208ENST00000565070 SMARCC2Q8TAQ2 1214 aa14.84□□□□□ -0.03
NSMCE1-208ENST00000565070 TCHHQ07283 1943 aa14.84□□□□□ -0.03
NSMCE1-208ENST00000565070 UTRNP46939 3433 aa14.83□□□□□ -0.03
NSMCE1-208ENST00000565070 TCP10L2B9ZVM9 353 aa14.83□□□□□ -0.04
NSMCE1-208ENST00000565070 POLR3DP05423 398 aaPredicted RBP14.83□□□□□ -0.04
NSMCE1-208ENST00000565070 HLA-DOAP06340 250 aa14.83□□□□□ -0.04
NSMCE1-208ENST00000565070 SLC3A2P08195 630 aaKnown RBP14.83□□□□□ -0.04
NSMCE1-208ENST00000565070 HIRAP54198 1017 aaPredicted RBP14.83□□□□□ -0.04
NSMCE1-208ENST00000565070 CACNB3P54284 484 aa14.83□□□□□ -0.04
NSMCE1-208ENST00000565070 NFIAQ12857 509 aa14.83□□□□□ -0.04
NSMCE1-208ENST00000565070 TBC1D10CQ8IV04 446 aa14.83□□□□□ -0.04
NSMCE1-208ENST00000565070 FAM151AQ8WW52 585 aa14.83□□□□□ -0.04
NSMCE1-208ENST00000565070 DDX4Q9NQI0 724 aaKnown RBP14.83□□□□□ -0.04
NSMCE1-208ENST00000565070 GGA3Q9NZ52 723 aa14.83□□□□□ -0.04
NSMCE1-208ENST00000565070 FAM198AQ9UFP1 575 aa14.83□□□□□ -0.04
NSMCE1-208ENST00000565070 PPP2R3BQ9Y5P8 575 aa14.83□□□□□ -0.04
NSMCE1-208ENST00000565070 ATRNL1Q5VV63 1379 aa14.82□□□□□ -0.04
NSMCE1-208ENST00000565070 POTECB2RU33 542 aa14.82□□□□□ -0.04
NSMCE1-208ENST00000565070 USP17L12C9JPN9 530 aa14.82□□□□□ -0.04
NSMCE1-208ENST00000565070 USP17L21D6R901 530 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms