RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 DLGAP5Q15398 846 aa8.74□□□□□ -1.01
MAP1LC3B-205ENST00000564638 CSPP1Q1MSJ5 1256 aa8.74□□□□□ -1.01
MAP1LC3B-205ENST00000564638 SLC9C2Q5TAH2 1124 aa8.74□□□□□ -1.01
MAP1LC3B-205ENST00000564638 NECAB1Q8N987 351 aa8.74□□□□□ -1.01
MAP1LC3B-205ENST00000564638 GTF3C6Q969F1 213 aa8.74□□□□□ -1.01
MAP1LC3B-205ENST00000564638 GGA3Q9NZ52 723 aa8.74□□□□□ -1.01
MAP1LC3B-205ENST00000564638 PCDHAC2Q9Y5I4 1007 aa8.74□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ECM29Q5VYK3 1845 aa8.74□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ASTN2O75129 1339 aaPredicted RBP8.74□□□□□ -1.01
MAP1LC3B-205ENST00000564638 COL6A3P12111 3177 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 THSD7BQ9C0I4 1608 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 CLRN2A0PK11 232 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 VPS37CA5D8V6 355 aaPredicted RBP8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 CRKP46108 304 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 MRE11P49959 708 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 STK3Q13188 491 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 NBPF9Q3BBW0 867 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 SPTY2D1Q68D10 685 aaPredicted RBP8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 RALYLQ86SE5 291 aaKnown RBP8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 DZIP1Q86YF9 867 aaKnown RBP8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 TMEM87AQ8NBN3 555 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 BRF1Q92994 677 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 TEKT1Q969V4 418 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 SYAP1Q96A49 352 aaPredicted RBP8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 AIDAQ96BJ3 306 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 DCPSQ96C86 337 aaKnown RBP8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 LLPHQ9BRT6 129 aaKnown RBP8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 GLIS2Q9BZE0 524 aaPredicted RBP8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 PUS7LQ9H0K6 701 aaKnown RBP8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 RAI14Q9P0K7 980 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 SCAF8Q9UPN6 1271 aaKnown RBP8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 MTMR6Q9Y217 621 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 KIF3AQ9Y496 699 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ZMYM6O95789 1325 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 WDR19Q8NEZ3 1342 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ZNF532Q9HCE3 1301 aa8.73□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ADM5C9JUS6 153 aa8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 WNT10BO00744 389 aa8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ZNF213O14771 459 aa8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 PFKFB2O60825 505 aa8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 EXOSC10Q01780 885 aaKnown RBP8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 DIXDC1Q155Q3 683 aa8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ANGEL2Q5VTE6 544 aaKnown RBP8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 LARP1BQ659C4 914 aaKnown RBP8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 CAVIN1Q6NZI2 390 aaKnown RBP8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 USP48Q86UV5 1035 aa8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 NCOA7Q8NI08 942 aa8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 AGXT2Q9BYV1 514 aa8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ZNF408Q9H9D4 720 aa8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 VEZTQ9HBM0 779 aa8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 LRP2BPQ9P2M1 347 aa8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 SUGT1Q9Y2Z0 365 aa8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 PDS5AQ29RF7 1337 aaKnown RBP8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 SALL1Q9NSC2 1324 aa8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 TRPM7Q96QT4 1865 aa8.72□□□□□ -1.01
MAP1LC3B-205ENST00000564638 LAMB1P07942 1786 aa8.71□□□□□ -1.01
MAP1LC3B-205ENST00000564638 TCRBV5S4A2TA0A5A2 114 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 SPDYE2BA6NHP3 402 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 RASSF10A6NK89 507 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TRAF5O00463 557 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 FOXP2O15409 715 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MYO1BO43795 1136 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 FGAP02671 866 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 APPP05067 770 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 SPDYE6P0CI01 402 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 GNAT2P19087 354 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MCM5P33992 734 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MMP14P50281 582 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ZNF445P59923 1031 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 HAND2P61296 217 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 HMGN5P82970 282 aaKnown RBP8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 FMR1Q06787 632 aaKnown RBP eCLIP8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TRDNQ13061 729 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 COL9A3Q14050 684 aaPredicted RBP8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 KRT26Q7Z3Y9 468 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 SULF1Q8IWU6 871 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MAGEB6Q8N7X4 407 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ZC3H15Q8WU90 426 aaKnown RBP8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PRMT6Q96LA8 375 aaPredicted RBP8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 LRRC2Q9BYS8 371 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MCOLN1Q9GZU1 580 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TDRD3Q9H7E2 651 aaKnown RBP8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 GRPEL1Q9HAV7 217 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 SERPINA10Q9UK55 444 aa8.71□□□□□ -1.02
MAP1LC3B-205ENST00000564638 BRCA2P51587 3418 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 FIBPO43427 364 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PRC1O43663 620 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MBD4O95243 580 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 HDLBPQ00341 1268 aaKnown RBP8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MECOMQ03112 1051 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 APOBRQ0VD83 1088 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ALX1Q15699 326 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ZSCAN23Q3MJ62 389 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 FOXD4L6Q3SYB3 417 aaPredicted RBP8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 DLK2Q6UY11 383 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 FOXD4L3Q6VB84 417 aaPredicted RBP8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CDC37L1Q7L3B6 337 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 APOBEC3FQ8IUX4 373 aaKnown RBP8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 SLF2Q8IX21 1173 aa8.7□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MB21D2Q8IYB1 491 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms