RNA–Protein interactions for RNA: ENST00000564131.1

RRN3-206, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

TSL 1 (best) BASIC

Gene RRN3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-206ENST00000564131 MECOMQ03112 1051 aa13.39□□□□□ -0.27
RRN3-206ENST00000564131 PABPC4Q13310 644 aaKnown RBP eCLIP13.39□□□□□ -0.27
RRN3-206ENST00000564131 SH3D19Q5HYK7 790 aa13.39□□□□□ -0.27
RRN3-206ENST00000564131 ZNF280CQ8ND82 737 aa13.39□□□□□ -0.27
RRN3-206ENST00000564131 ZNF384Q8TF68 577 aa13.39□□□□□ -0.27
RRN3-206ENST00000564131 ARHGAP45Q92619 1136 aa13.39□□□□□ -0.27
RRN3-206ENST00000564131 XAGE2Q96GT9 111 aa13.39□□□□□ -0.27
RRN3-206ENST00000564131 NOB1Q9ULX3 412 aaKnown RBP13.39□□□□□ -0.27
RRN3-206ENST00000564131 ALPK3Q96L96 1907 aa13.39□□□□□ -0.27
RRN3-206ENST00000564131 IGSF3O75054 1194 aa13.38□□□□□ -0.27
RRN3-206ENST00000564131 CAP2P40123 477 aa13.38□□□□□ -0.27
RRN3-206ENST00000564131 PICALMQ13492 652 aa13.38□□□□□ -0.27
RRN3-206ENST00000564131 TREML2Q5T2D2 321 aa13.38□□□□□ -0.27
RRN3-206ENST00000564131 GPR153Q6NV75 609 aa13.38□□□□□ -0.27
RRN3-206ENST00000564131 NECAB2Q7Z6G3 386 aa13.38□□□□□ -0.27
RRN3-206ENST00000564131 ANKRD13CQ8N6S4 541 aa13.38□□□□□ -0.27
RRN3-206ENST00000564131 NSUN4Q96CB9 384 aaKnown RBP13.38□□□□□ -0.27
RRN3-206ENST00000564131 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.38□□□□□ -0.27
RRN3-206ENST00000564131 HERC5Q9UII4 1024 aaKnown RBP13.38□□□□□ -0.27
RRN3-206ENST00000564131 GJD2Q9UKL4 321 aa13.38□□□□□ -0.27
RRN3-206ENST00000564131 ATAD5Q96QE3 1844 aa13.38□□□□□ -0.27
RRN3-206ENST00000564131 HMGCRP04035 888 aa13.37□□□□□ -0.27
RRN3-206ENST00000564131 GNAI3P08754 354 aa13.37□□□□□ -0.27
RRN3-206ENST00000564131 SLURP2P0DP57 97 aa13.37□□□□□ -0.27
RRN3-206ENST00000564131 SPP2Q13103 211 aa13.37□□□□□ -0.27
RRN3-206ENST00000564131 PAWRQ96IZ0 340 aaKnown RBP13.37□□□□□ -0.27
RRN3-206ENST00000564131 MEIS3Q99687 375 aa13.37□□□□□ -0.27
RRN3-206ENST00000564131 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.37□□□□□ -0.27
RRN3-206ENST00000564131 HMG20BQ9P0W2 317 aa13.37□□□□□ -0.27
RRN3-206ENST00000564131 MORF4L1Q9UBU8 362 aa13.37□□□□□ -0.27
RRN3-206ENST00000564131 RPTORQ8N122 1335 aa13.37□□□□□ -0.27
RRN3-206ENST00000564131 USP17L5A8MUK1 530 aa13.36□□□□□ -0.27
RRN3-206ENST00000564131 SRGAP3O43295 1099 aa13.36□□□□□ -0.27
RRN3-206ENST00000564131 ARID4AP29374 1257 aaPredicted RBP13.36□□□□□ -0.27
RRN3-206ENST00000564131 HOXA7P31268 230 aaPredicted RBP13.36□□□□□ -0.27
RRN3-206ENST00000564131 TFCP2Q12800 502 aa13.36□□□□□ -0.27
RRN3-206ENST00000564131 SPATA5Q8NB90 893 aa13.36□□□□□ -0.27
RRN3-206ENST00000564131 CDCA7LQ96GN5 454 aa13.36□□□□□ -0.27
RRN3-206ENST00000564131 GDF15Q99988 308 aa13.36□□□□□ -0.27
RRN3-206ENST00000564131 WDR18Q9BV38 432 aa13.36□□□□□ -0.27
RRN3-206ENST00000564131 DHX36Q9H2U1 1008 aaKnown RBP13.36□□□□□ -0.27
RRN3-206ENST00000564131 AS3MTQ9HBK9 375 aa13.36□□□□□ -0.27
RRN3-206ENST00000564131 GINM1Q9NU53 330 aa13.36□□□□□ -0.27
RRN3-206ENST00000564131 PI4KBQ9UBF8 816 aa13.36□□□□□ -0.27
RRN3-206ENST00000564131 PLXNB2O15031 1838 aa13.35□□□□□ -0.27
RRN3-206ENST00000564131 XRCC5P13010 732 aaKnown RBP13.35□□□□□ -0.27
RRN3-206ENST00000564131 MAP3K21Q5TCX8 1036 aa13.35□□□□□ -0.27
RRN3-206ENST00000564131 CCDC84Q86UT8 332 aaPredicted RBP13.35□□□□□ -0.27
RRN3-206ENST00000564131 METTL16Q86W50 562 aaKnown RBP13.35□□□□□ -0.27
RRN3-206ENST00000564131 NBPF3Q9H094 633 aa13.35□□□□□ -0.27
RRN3-206ENST00000564131 ASCC2Q9H1I8 757 aaPredicted RBP13.35□□□□□ -0.27
RRN3-206ENST00000564131 HMX1Q9NP08 348 aaPredicted RBP13.35□□□□□ -0.27
RRN3-206ENST00000564131 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.35□□□□□ -0.27
RRN3-206ENST00000564131 ASNSP08243 561 aa13.34□□□□□ -0.27
RRN3-206ENST00000564131 MNX1P50219 401 aaPredicted RBP13.34□□□□□ -0.27
RRN3-206ENST00000564131 HMGCS2P54868 508 aa13.34□□□□□ -0.27
RRN3-206ENST00000564131 BACE1P56817 501 aa13.34□□□□□ -0.27
RRN3-206ENST00000564131 PPP4CP60510 307 aa13.34□□□□□ -0.27
RRN3-206ENST00000564131 RRP1BQ14684 758 aaKnown RBP13.34□□□□□ -0.27
RRN3-206ENST00000564131 STAP2Q9UGK3 403 aa13.34□□□□□ -0.27
RRN3-206ENST00000564131 OGDHLQ9ULD0 1010 aa13.34□□□□□ -0.27
RRN3-206ENST00000564131 C19orf81C9J6K1 198 aa13.33□□□□□ -0.28
RRN3-206ENST00000564131 SOX1O00570 391 aaPredicted RBP13.33□□□□□ -0.28
RRN3-206ENST00000564131 UQCRFS1P1P0C7P4 283 aa13.33□□□□□ -0.28
RRN3-206ENST00000564131 PLCG2P16885 1265 aa13.33□□□□□ -0.28
RRN3-206ENST00000564131 RARSP54136 660 aaKnown RBP13.33□□□□□ -0.28
RRN3-206ENST00000564131 FOXP4Q8IVH2 680 aaPredicted RBP13.33□□□□□ -0.28
RRN3-206ENST00000564131 TEX11Q8IYF3 940 aa13.33□□□□□ -0.28
RRN3-206ENST00000564131 TRMT44Q8IYL2 757 aaKnown RBP13.33□□□□□ -0.28
RRN3-206ENST00000564131 NEUROD6Q96NK8 337 aa13.33□□□□□ -0.28
RRN3-206ENST00000564131 TAOK2Q9UL54 1235 aa13.33□□□□□ -0.28
RRN3-206ENST00000564131 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.33□□□□□ -0.28
RRN3-206ENST00000564131 SIPA1L1O43166 1804 aa13.32□□□□□ -0.28
RRN3-206ENST00000564131 FOCADQ5VW36 1801 aa13.32□□□□□ -0.28
RRN3-206ENST00000564131 FAM196BA6NMK8 535 aa13.32□□□□□ -0.28
RRN3-206ENST00000564131 BAG3O95817 575 aa13.32□□□□□ -0.28
RRN3-206ENST00000564131 LRIT3Q3SXY7 679 aa13.32□□□□□ -0.28
RRN3-206ENST00000564131 GORABQ5T7V8 394 aa13.32□□□□□ -0.28
RRN3-206ENST00000564131 TBC1D9Q6ZT07 1266 aa13.32□□□□□ -0.28
RRN3-206ENST00000564131 DIS3LQ8TF46 1054 aaKnown RBP13.32□□□□□ -0.28
RRN3-206ENST00000564131 GTF3C2Q8WUA4 911 aaPredicted RBP13.32□□□□□ -0.28
RRN3-206ENST00000564131 SOCS4Q8WXH5 440 aa13.32□□□□□ -0.28
RRN3-206ENST00000564131 GPR108Q9NPR9 543 aa13.32□□□□□ -0.28
RRN3-206ENST00000564131 RAI14Q9P0K7 980 aa13.32□□□□□ -0.28
RRN3-206ENST00000564131 DDX60LQ5H9U9 1706 aaKnown RBP13.31□□□□□ -0.28
RRN3-206ENST00000564131 MCAMP43121 646 aa13.31□□□□□ -0.28
RRN3-206ENST00000564131 PI16Q6UXB8 463 aa13.31□□□□□ -0.28
RRN3-206ENST00000564131 SLC17A8Q8NDX2 589 aa13.31□□□□□ -0.28
RRN3-206ENST00000564131 GPRC5AQ8NFJ5 357 aa13.31□□□□□ -0.28
RRN3-206ENST00000564131 TRIB2Q92519 343 aa13.31□□□□□ -0.28
RRN3-206ENST00000564131 LRCH3Q96II8 777 aa13.31□□□□□ -0.28
RRN3-206ENST00000564131 ZNF512BQ96KM6 892 aaPredicted RBP13.31□□□□□ -0.28
RRN3-206ENST00000564131 P2RX7Q99572 595 aaKnown RBP13.31□□□□□ -0.28
RRN3-206ENST00000564131 NUDT12Q9BQG2 462 aa13.31□□□□□ -0.28
RRN3-206ENST00000564131 C11orf49Q9H6J7 331 aa13.31□□□□□ -0.28
RRN3-206ENST00000564131 TMOD4Q9NZQ9 345 aa13.31□□□□□ -0.28
RRN3-206ENST00000564131 LRP2BPQ9P2M1 347 aa13.31□□□□□ -0.28
RRN3-206ENST00000564131 CDK5RAP2Q96SN8 1893 aa13.31□□□□□ -0.28
RRN3-206ENST00000564131 GNAI2P04899 355 aa13.3□□□□□ -0.28
RRN3-206ENST00000564131 MAPK4P31152 587 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms