RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 SDR42E1Q8WUS8 393 aa23.04■■□□□ 1.28
MSLN-205ENST00000563941 RAI14Q9P0K7 980 aa23.04■■□□□ 1.28
MSLN-205ENST00000563941 KCNH3Q9ULD8 1083 aa23.04■■□□□ 1.28
MSLN-205ENST00000563941 COL5A3P25940 1745 aaPredicted RBP23.03■■□□□ 1.28
MSLN-205ENST00000563941 MAGEB6P1A0A0J9YX57 407 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 DEXIO95424 95 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 PRKCSHP14314 528 aaPredicted RBP23.03■■□□□ 1.28
MSLN-205ENST00000563941 GYG1P46976 350 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 RCAN1P53805 252 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 TMC6Q7Z403 805 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 CCDC82Q8N4S0 544 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 CRACR2BQ8N4Y2 399 aaPredicted RBP23.03■■□□□ 1.28
MSLN-205ENST00000563941 UBAC1Q9BSL1 405 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 MINDY4BA8MYZ0 360 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 TOB1P50616 345 aaPredicted RBP23.03■■□□□ 1.28
MSLN-205ENST00000563941 LONRF3Q496Y0 759 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 CEP135Q66GS9 1140 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 KRBA2Q6ZNG9 492 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 METTL16Q86W50 562 aaKnown RBP23.03■■□□□ 1.28
MSLN-205ENST00000563941 ANKRD18AQ8IVF6 992 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 CMTR1Q8N1G2 835 aaKnown RBP23.03■■□□□ 1.28
MSLN-205ENST00000563941 NUP133Q8WUM0 1156 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 ARID3AQ99856 593 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 FOXP1Q9H334 677 aaPredicted RBP23.03■■□□□ 1.28
MSLN-205ENST00000563941 GNL3LQ9NVN8 582 aaKnown RBP23.03■■□□□ 1.28
MSLN-205ENST00000563941 COL1A1P02452 1464 aaPredicted RBP23.03■■□□□ 1.28
MSLN-205ENST00000563941 CASZ1Q86V15 1759 aa23.03■■□□□ 1.28
MSLN-205ENST00000563941 LMOD1P29536 600 aaPredicted RBP23.02■■□□□ 1.28
MSLN-205ENST00000563941 ERFEQ4G0M1 354 aa23.02■■□□□ 1.28
MSLN-205ENST00000563941 FANCBQ8NB91 859 aa23.02■■□□□ 1.28
MSLN-205ENST00000563941 TAF1P21675 1872 aa23.02■■□□□ 1.28
MSLN-205ENST00000563941 C3orf67Q6ZVT6 689 aa23.02■■□□□ 1.28
MSLN-205ENST00000563941 CNNM3Q8NE01 707 aa23.02■■□□□ 1.28
MSLN-205ENST00000563941 HSD3B7Q9H2F3 369 aa23.02■■□□□ 1.28
MSLN-205ENST00000563941 ANAPC4Q9UJX5 808 aa23.02■■□□□ 1.28
MSLN-205ENST00000563941 CACNA1SQ13698 1873 aa23.02■■□□□ 1.27
MSLN-205ENST00000563941 MYH6P13533 1939 aa23.01■■□□□ 1.27
MSLN-205ENST00000563941 FANCCQ00597 558 aa23.01■■□□□ 1.27
MSLN-205ENST00000563941 NYAP1Q6ZVC0 841 aa23.01■■□□□ 1.27
MSLN-205ENST00000563941 CCDC150Q8NCX0 1101 aa23.01■■□□□ 1.27
MSLN-205ENST00000563941 SMARCC1Q92922 1105 aaPredicted RBP23.01■■□□□ 1.27
MSLN-205ENST00000563941 UBE4AQ14139 1066 aa23■■□□□ 1.27
MSLN-205ENST00000563941 SEC23AQ15436 765 aa23■■□□□ 1.27
MSLN-205ENST00000563941 PTPN14Q15678 1187 aa23■■□□□ 1.27
MSLN-205ENST00000563941 RILPL1Q5EBL4 403 aa23■■□□□ 1.27
MSLN-205ENST00000563941 CLEC4GQ6UXB4 293 aa23■■□□□ 1.27
MSLN-205ENST00000563941 CCAR2Q8N163 923 aaKnown RBP23■■□□□ 1.27
MSLN-205ENST00000563941 ESR2Q92731 530 aa23■■□□□ 1.27
MSLN-205ENST00000563941 KCND1Q9NSA2 647 aa23■■□□□ 1.27
MSLN-205ENST00000563941 TNKSO95271 1327 aa23■■□□□ 1.27
MSLN-205ENST00000563941 SPATA31A5Q5VU36 1347 aa23■■□□□ 1.27
MSLN-205ENST00000563941 SPATA31A7Q8IWB4 1347 aa23■■□□□ 1.27
MSLN-205ENST00000563941 WTIPA6NIX2 430 aaPredicted RBP23■■□□□ 1.27
MSLN-205ENST00000563941 MYL5Q02045 173 aa23■■□□□ 1.27
MSLN-205ENST00000563941 SPECC1Q5M775 1068 aa23■■□□□ 1.27
MSLN-205ENST00000563941 CCDC112Q8NEF3 446 aa23■■□□□ 1.27
MSLN-205ENST00000563941 ANKRD7Q92527 254 aa23■■□□□ 1.27
MSLN-205ENST00000563941 ZNF592Q92610 1267 aa23■■□□□ 1.27
MSLN-205ENST00000563941 RIOK1Q9BRS2 568 aaKnown RBP23■■□□□ 1.27
MSLN-205ENST00000563941 NR5A1Q13285 461 aa22.99■■□□□ 1.27
MSLN-205ENST00000563941 SF3B3Q15393 1217 aaKnown RBP22.99■■□□□ 1.27
MSLN-205ENST00000563941 ARMCX5Q6P1M9 558 aa22.99■■□□□ 1.27
MSLN-205ENST00000563941 CCDC94Q9BW85 323 aaPredicted RBP22.99■■□□□ 1.27
MSLN-205ENST00000563941 TRMT1Q9NXH9 659 aaKnown RBP22.99■■□□□ 1.27
MSLN-205ENST00000563941 FBXO2Q9UK22 296 aaPredicted RBP22.99■■□□□ 1.27
MSLN-205ENST00000563941 SCN7AQ01118 1682 aa22.99■■□□□ 1.27
MSLN-205ENST00000563941 DUOX1Q9NRD9 1551 aa22.99■■□□□ 1.27
MSLN-205ENST00000563941 SMIM22K7EJ46 135 aa22.99■■□□□ 1.27
MSLN-205ENST00000563941 KCNQ2O43526 872 aa22.99■■□□□ 1.27
MSLN-205ENST00000563941 ATP1A3P13637 1013 aa22.99■■□□□ 1.27
MSLN-205ENST00000563941 FOXP4Q8IVH2 680 aaPredicted RBP22.99■■□□□ 1.27
MSLN-205ENST00000563941 BSDC1Q9NW68 430 aaPredicted RBP22.99■■□□□ 1.27
MSLN-205ENST00000563941 PCDHA5Q9Y5H7 936 aa22.99■■□□□ 1.27
MSLN-205ENST00000563941 BAZ2AQ9UIF9 1905 aaKnown RBP22.99■■□□□ 1.27
MSLN-205ENST00000563941 MYH2Q9UKX2 1941 aa22.99■■□□□ 1.27
MSLN-205ENST00000563941 PTPREP23469 700 aa22.98■■□□□ 1.27
MSLN-205ENST00000563941 GRIN1Q05586 938 aa22.98■■□□□ 1.27
MSLN-205ENST00000563941 CAVIN4Q5BKX8 364 aa22.98■■□□□ 1.27
MSLN-205ENST00000563941 OLFM4Q6UX06 510 aa22.98■■□□□ 1.27
MSLN-205ENST00000563941 SFPQP23246 707 aaKnown RBP eCLIP22.97■■□□□ 1.27
MSLN-205ENST00000563941 ELOA2Q8IYF1 753 aaPredicted RBP22.97■■□□□ 1.27
MSLN-205ENST00000563941 PCDHB6Q9Y5E3 794 aa22.97■■□□□ 1.27
MSLN-205ENST00000563941 DYNLL1P63167 89 aaKnown RBP22.97■■□□□ 1.27
MSLN-205ENST00000563941 DHX8Q14562 1220 aaKnown RBP22.97■■□□□ 1.27
MSLN-205ENST00000563941 OXER1Q8TDS5 423 aa22.97■■□□□ 1.27
MSLN-205ENST00000563941 RNF26Q9BY78 433 aaPredicted RBP22.97■■□□□ 1.27
MSLN-205ENST00000563941 MINPP1Q9UNW1 487 aa22.97■■□□□ 1.27
MSLN-205ENST00000563941 FOXN1O15353 648 aa22.96■■□□□ 1.27
MSLN-205ENST00000563941 MDM2Q00987 491 aaPredicted RBP22.96■■□□□ 1.27
MSLN-205ENST00000563941 PPP2R5BQ15173 497 aa22.96■■□□□ 1.27
MSLN-205ENST00000563941 ENAHQ8N8S7 591 aaPredicted RBP22.96■■□□□ 1.27
MSLN-205ENST00000563941 LINC00116Q8NCU8 138 aa22.96■■□□□ 1.27
MSLN-205ENST00000563941 HOOK1Q9UJC3 728 aaKnown RBP22.96■■□□□ 1.27
MSLN-205ENST00000563941 SYCP1Q15431 976 aa22.96■■□□□ 1.27
MSLN-205ENST00000563941 BARGINQ6ZT62 677 aa22.96■■□□□ 1.27
MSLN-205ENST00000563941 PDCL2Q8N4E4 241 aa22.96■■□□□ 1.27
MSLN-205ENST00000563941 ZSCAN10Q96SZ4 725 aaPredicted RBP22.96■■□□□ 1.27
MSLN-205ENST00000563941 BRIP1Q9BX63 1249 aa22.96■■□□□ 1.27
MSLN-205ENST00000563941 CYP2D7A0A087X1C5 515 aa22.95■■□□□ 1.26
MSLN-205ENST00000563941 NCBP1Q09161 790 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms