RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 RTF1Q92541 710 aaKnown RBP9.56□□□□□ -0.88
TCF4-221ENST00000563888 SHISA4Q96DD7 197 aa9.56□□□□□ -0.88
TCF4-221ENST00000563888 CLMNQ96JQ2 1002 aa9.56□□□□□ -0.88
TCF4-221ENST00000563888 C1QTNF2Q9BXJ5 285 aa9.56□□□□□ -0.88
TCF4-221ENST00000563888 RAPGEFL1Q9UHV5 662 aa9.56□□□□□ -0.88
TCF4-221ENST00000563888 KNSTRNQ9Y448 316 aa9.56□□□□□ -0.88
TCF4-221ENST00000563888 EYSQ5T1H1 3165 aa9.56□□□□□ -0.88
TCF4-221ENST00000563888 PRUNE2Q8WUY3 3088 aa9.55□□□□□ -0.88
TCF4-221ENST00000563888 TTC28Q96AY4 2481 aa9.55□□□□□ -0.88
TCF4-221ENST00000563888 RAB15P59190 212 aa9.55□□□□□ -0.88
TCF4-221ENST00000563888 MTFR1Q15390 333 aa9.55□□□□□ -0.88
TCF4-221ENST00000563888 CELF1Q92879 486 aaKnown RBP9.55□□□□□ -0.88
TCF4-221ENST00000563888 WNK4Q96J92 1243 aa9.55□□□□□ -0.88
TCF4-221ENST00000563888 MTMR10Q9NXD2 777 aa9.55□□□□□ -0.88
TCF4-221ENST00000563888 TRMT112Q9UI30 125 aaKnown RBP9.55□□□□□ -0.88
TCF4-221ENST00000563888 RBM19Q9Y4C8 960 aaKnown RBP9.55□□□□□ -0.88
TCF4-221ENST00000563888 SASH1O94885 1247 aa9.54□□□□□ -0.88
TCF4-221ENST00000563888 ZBTB48P10074 688 aaPredicted RBP9.54□□□□□ -0.88
TCF4-221ENST00000563888 ATP1A2P50993 1020 aa9.54□□□□□ -0.88
TCF4-221ENST00000563888 CNGB1Q14028 1251 aaPredicted RBP9.54□□□□□ -0.88
TCF4-221ENST00000563888 TSGA10IPQ3SY00 556 aa9.54□□□□□ -0.88
TCF4-221ENST00000563888 KCTD15Q96SI1 283 aaPredicted RBP9.54□□□□□ -0.88
TCF4-221ENST00000563888 GMLQ99445 158 aa9.54□□□□□ -0.88
TCF4-221ENST00000563888 PTPN18Q99952 460 aa9.54□□□□□ -0.88
TCF4-221ENST00000563888 THUMPD2Q9BTF0 503 aaKnown RBP9.54□□□□□ -0.88
TCF4-221ENST00000563888 MXD3Q9BW11 206 aa9.54□□□□□ -0.88
TCF4-221ENST00000563888 PCDHB11Q9Y5F2 797 aa9.54□□□□□ -0.88
TCF4-221ENST00000563888 RBBP6Q7Z6E9 1792 aaKnown RBP9.53□□□□□ -0.88
TCF4-221ENST00000563888 UFL1O94874 794 aa9.53□□□□□ -0.88
TCF4-221ENST00000563888 SKOR1P84550 965 aa9.53□□□□□ -0.88
TCF4-221ENST00000563888 USP4Q13107 963 aa9.53□□□□□ -0.88
TCF4-221ENST00000563888 CCDC85AQ96PX6 553 aaPredicted RBP9.53□□□□□ -0.88
TCF4-221ENST00000563888 ARHGAP39Q9C0H5 1083 aa9.53□□□□□ -0.88
TCF4-221ENST00000563888 ANKIB1Q9P2G1 1089 aa9.53□□□□□ -0.88
TCF4-221ENST00000563888 NOVA2Q9UNW9 492 aaKnown RBP9.53□□□□□ -0.88
TCF4-221ENST00000563888 DUOX1Q9NRD9 1551 aa9.53□□□□□ -0.88
TCF4-221ENST00000563888 FAM196BA6NMK8 535 aa9.52□□□□□ -0.89
TCF4-221ENST00000563888 WNT10BO00744 389 aa9.52□□□□□ -0.89
TCF4-221ENST00000563888 PRKAR2BP31323 418 aa9.52□□□□□ -0.89
TCF4-221ENST00000563888 ELOAQ14241 798 aaKnown RBP9.52□□□□□ -0.89
TCF4-221ENST00000563888 TAF7Q15545 349 aaPredicted RBP9.52□□□□□ -0.89
TCF4-221ENST00000563888 TRAF7Q6Q0C0 670 aa9.52□□□□□ -0.89
TCF4-221ENST00000563888 NLRP10Q86W26 655 aa9.52□□□□□ -0.89
TCF4-221ENST00000563888 OGFOD1Q8N543 542 aa9.52□□□□□ -0.89
TCF4-221ENST00000563888 FAM200AQ8TCP9 573 aa9.52□□□□□ -0.89
TCF4-221ENST00000563888 BIN2Q9UBW5 565 aaPredicted RBP9.52□□□□□ -0.89
TCF4-221ENST00000563888 ERBB4Q15303 1308 aa9.52□□□□□ -0.89
TCF4-221ENST00000563888 SH3TC1Q8TE82 1336 aa9.52□□□□□ -0.89
TCF4-221ENST00000563888 USP17L15C9J2P7 530 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 PATL2C9JE40 543 aaKnown RBP9.51□□□□□ -0.89
TCF4-221ENST00000563888 USP17L10C9JJH3 530 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 USP17L13C9JLJ4 530 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 USP17L12C9JPN9 530 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 USP17L11C9JVI0 530 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 USP17L21D6R901 530 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 USP17L18D6R9N7 530 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 USP17L22D6RA61 530 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 USP17L17D6RBQ6 530 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 USP17L19D6RCP7 530 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 USP17L20D6RJB6 530 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 PPP1R12BO60237 982 aaPredicted RBP9.51□□□□□ -0.89
TCF4-221ENST00000563888 FARP2O94887 1054 aaPredicted RBP9.51□□□□□ -0.89
TCF4-221ENST00000563888 USP17L24Q0WX57 530 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 KIF22Q14807 665 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 TAF1CQ15572 869 aaPredicted RBP9.51□□□□□ -0.89
TCF4-221ENST00000563888 UBE2Q1Q7Z7E8 422 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 RNF208Q9H0X6 261 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 ZFYVE28Q9HCC9 887 aa9.51□□□□□ -0.89
TCF4-221ENST00000563888 DNAAF2Q9NVR5 837 aaKnown RBP9.51□□□□□ -0.89
TCF4-221ENST00000563888 ESPNB1AK53 854 aa9.5□□□□□ -0.89
TCF4-221ENST00000563888 CCL5P13501 91 aa9.5□□□□□ -0.89
TCF4-221ENST00000563888 SLC19A1P41440 591 aa9.5□□□□□ -0.89
TCF4-221ENST00000563888 GJA8P48165 433 aa9.5□□□□□ -0.89
TCF4-221ENST00000563888 RPS8P62241 208 aaKnown RBP9.5□□□□□ -0.89
TCF4-221ENST00000563888 AIMP1Q12904 312 aaKnown RBP9.5□□□□□ -0.89
TCF4-221ENST00000563888 CRTC2Q53ET0 693 aaPredicted RBP9.5□□□□□ -0.89
TCF4-221ENST00000563888 LIAT1Q6ZQX7 453 aa9.5□□□□□ -0.89
TCF4-221ENST00000563888 DEFB129Q9H1M3 183 aa9.5□□□□□ -0.89
TCF4-221ENST00000563888 GGA1Q9UJY5 639 aa9.5□□□□□ -0.89
TCF4-221ENST00000563888 MAP4K5Q9Y4K4 846 aa9.5□□□□□ -0.89
TCF4-221ENST00000563888 MUC3AQ02505 3323 aa9.5□□□□□ -0.89
TCF4-221ENST00000563888 CARNS1A5YM72 827 aa9.49□□□□□ -0.89
TCF4-221ENST00000563888 BRD1O95696 1058 aa9.49□□□□□ -0.89
TCF4-221ENST00000563888 ANXA1P04083 346 aa9.49□□□□□ -0.89
TCF4-221ENST00000563888 GJB1P08034 283 aa9.49□□□□□ -0.89
TCF4-221ENST00000563888 EIF2S2P20042 333 aaKnown RBP9.49□□□□□ -0.89
TCF4-221ENST00000563888 CC2D1BQ5T0F9 858 aaKnown RBP9.49□□□□□ -0.89
TCF4-221ENST00000563888 APOBEC3FQ8IUX4 373 aaKnown RBP9.49□□□□□ -0.89
TCF4-221ENST00000563888 FAM122AQ96E09 287 aa9.49□□□□□ -0.89
TCF4-221ENST00000563888 FAM89AQ96GI7 184 aa9.49□□□□□ -0.89
TCF4-221ENST00000563888 ZNF594Q96JF6 807 aaPredicted RBP9.49□□□□□ -0.89
TCF4-221ENST00000563888 FAM161BQ96MY7 647 aa9.49□□□□□ -0.89
TCF4-221ENST00000563888 PRKD2Q9BZL6 878 aa9.49□□□□□ -0.89
TCF4-221ENST00000563888 ELP3Q9H9T3 547 aa9.49□□□□□ -0.89
TCF4-221ENST00000563888 ZMYND8Q9ULU4 1186 aaPredicted RBP9.49□□□□□ -0.89
TCF4-221ENST00000563888 V9GY48 417 aaPredicted RBP9.49□□□□□ -0.89
TCF4-221ENST00000563888 SIPA1L3O60292 1781 aaPredicted RBP9.49□□□□□ -0.89
TCF4-221ENST00000563888 RPTORQ8N122 1335 aa9.49□□□□□ -0.89
TCF4-221ENST00000563888 GTF2IP78347 998 aa9.48□□□□□ -0.89
TCF4-221ENST00000563888 PTK7Q13308 1070 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms