RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 FZD9O00144 591 aa25.83■■□□□ 1.72
LINC01960-201ENST00000563759 SH2B2O14492 632 aaPredicted RBP25.83■■□□□ 1.72
LINC01960-201ENST00000563759 LMNB1P20700 586 aa25.83■■□□□ 1.72
LINC01960-201ENST00000563759 DLGAP5Q15398 846 aa25.83■■□□□ 1.72
LINC01960-201ENST00000563759 TMEM67Q5HYA8 995 aa25.83■■□□□ 1.72
LINC01960-201ENST00000563759 UBAC1Q9BSL1 405 aa25.83■■□□□ 1.72
LINC01960-201ENST00000563759 OSBPL5Q9H0X9 879 aaPredicted RBP25.83■■□□□ 1.72
LINC01960-201ENST00000563759 CWC22Q9HCG8 908 aaKnown RBP25.83■■□□□ 1.72
LINC01960-201ENST00000563759 ERICH2A1L162 156 aa25.82■■□□□ 1.72
LINC01960-201ENST00000563759 IFIT3O14879 490 aaKnown RBP25.82■■□□□ 1.72
LINC01960-201ENST00000563759 DDIT3P35638 169 aa25.82■■□□□ 1.72
LINC01960-201ENST00000563759 CACNB3P54284 484 aa25.82■■□□□ 1.72
LINC01960-201ENST00000563759 NFIAQ12857 509 aa25.82■■□□□ 1.72
LINC01960-201ENST00000563759 TDRD3Q9H7E2 651 aaKnown RBP25.82■■□□□ 1.72
LINC01960-201ENST00000563759 CHMP5Q9NZZ3 219 aa25.82■■□□□ 1.72
LINC01960-201ENST00000563759 SPDYE2BA6NHP3 402 aa25.81■■□□□ 1.72
LINC01960-201ENST00000563759 SPDYE6P0CI01 402 aa25.81■■□□□ 1.72
LINC01960-201ENST00000563759 DYNLL2Q96FJ2 89 aa25.81■■□□□ 1.72
LINC01960-201ENST00000563759 PRMT6Q96LA8 375 aaPredicted RBP25.81■■□□□ 1.72
LINC01960-201ENST00000563759 ZNF287Q9HBT7 754 aa25.81■■□□□ 1.72
LINC01960-201ENST00000563759 KLF18A0A0U1RQI7 1052 aa25.81■■□□□ 1.72
LINC01960-201ENST00000563759 RPS12P25398 132 aaKnown RBP25.81■■□□□ 1.72
LINC01960-201ENST00000563759 TTC6Q86TZ1 520 aa25.81■■□□□ 1.72
LINC01960-201ENST00000563759 GTF3C6Q969F1 213 aa25.81■■□□□ 1.72
LINC01960-201ENST00000563759 ZKSCAN3Q9BRR0 538 aa25.81■■□□□ 1.72
LINC01960-201ENST00000563759 MKNK2Q9HBH9 465 aa25.81■■□□□ 1.72
LINC01960-201ENST00000563759 TMOD2Q9NZR1 351 aa25.81■■□□□ 1.72
LINC01960-201ENST00000563759 CIZ1Q9ULV3 898 aaPredicted RBP25.81■■□□□ 1.72
LINC01960-201ENST00000563759 GJA3Q9Y6H8 435 aa25.81■■□□□ 1.72
LINC01960-201ENST00000563759 ST3GAL1Q11201 340 aa25.8■■□□□ 1.72
LINC01960-201ENST00000563759 ZNF274Q96GC6 653 aaPredicted RBP25.8■■□□□ 1.72
LINC01960-201ENST00000563759 MTA3Q9BTC8 594 aa25.8■■□□□ 1.72
LINC01960-201ENST00000563759 IDI2Q9BXS1 227 aa25.8■■□□□ 1.72
LINC01960-201ENST00000563759 SIPA1L1O43166 1804 aa25.8■■□□□ 1.72
LINC01960-201ENST00000563759 YBX3P16989 372 aaKnown RBP eCLIP25.79■■□□□ 1.72
LINC01960-201ENST00000563759 NFXL1Q6ZNB6 911 aa25.79■■□□□ 1.72
LINC01960-201ENST00000563759 IQCA1Q86XH1 822 aa25.79■■□□□ 1.72
LINC01960-201ENST00000563759 IGDCC4Q8TDY8 1250 aa25.79■■□□□ 1.72
LINC01960-201ENST00000563759 LY9Q9HBG7 655 aa25.79■■□□□ 1.72
LINC01960-201ENST00000563759 ZNF541Q9H0D2 1346 aa25.79■■□□□ 1.72
LINC01960-201ENST00000563759 TSPY2A6NKD2 308 aa25.79■■□□□ 1.72
LINC01960-201ENST00000563759 GOLGA8BA8MQT2 603 aa25.79■■□□□ 1.72
LINC01960-201ENST00000563759 EVCP57679 992 aa25.79■■□□□ 1.72
LINC01960-201ENST00000563759 TNKSO95271 1327 aa25.78■■□□□ 1.72
LINC01960-201ENST00000563759 PFKFB2O60825 505 aa25.78■■□□□ 1.72
LINC01960-201ENST00000563759 HLA-DOAP06340 250 aa25.78■■□□□ 1.72
LINC01960-201ENST00000563759 NT5C2P49902 561 aa25.78■■□□□ 1.72
LINC01960-201ENST00000563759 TCP10Q12799 353 aa25.78■■□□□ 1.72
LINC01960-201ENST00000563759 WTAPQ15007 396 aa25.78■■□□□ 1.72
LINC01960-201ENST00000563759 C16orf86Q6ZW13 317 aa25.78■■□□□ 1.72
LINC01960-201ENST00000563759 SLC44A5Q8NCS7 719 aa25.78■■□□□ 1.72
LINC01960-201ENST00000563759 BRPF3Q9ULD4 1205 aa25.78■■□□□ 1.72
LINC01960-201ENST00000563759 SMC3Q9UQE7 1217 aa25.78■■□□□ 1.72
LINC01960-201ENST00000563759 PDIA3P30101 505 aaKnown RBP25.77■■□□□ 1.72
LINC01960-201ENST00000563759 LIFRP42702 1097 aa25.77■■□□□ 1.72
LINC01960-201ENST00000563759 CCDC69A6NI79 296 aa25.77■■□□□ 1.72
LINC01960-201ENST00000563759 GMPSP49915 693 aaPredicted RBP25.77■■□□□ 1.72
LINC01960-201ENST00000563759 SCRN1Q12765 414 aa25.77■■□□□ 1.72
LINC01960-201ENST00000563759 FAM47AQ5JRC9 791 aa25.77■■□□□ 1.72
LINC01960-201ENST00000563759 MTMR14Q8NCE2 650 aa25.77■■□□□ 1.72
LINC01960-201ENST00000563759 ZSCAN10Q96SZ4 725 aaPredicted RBP25.77■■□□□ 1.72
LINC01960-201ENST00000563759 MYOZ2Q9NPC6 264 aa25.77■■□□□ 1.72
LINC01960-201ENST00000563759 FAM198AQ9UFP1 575 aa25.77■■□□□ 1.72
LINC01960-201ENST00000563759 NPM3O75607 178 aaKnown RBP25.76■■□□□ 1.71
LINC01960-201ENST00000563759 MMP14P50281 582 aa25.76■■□□□ 1.71
LINC01960-201ENST00000563759 CCT2P78371 535 aaKnown RBP25.76■■□□□ 1.71
LINC01960-201ENST00000563759 SGMS1Q86VZ5 419 aa25.76■■□□□ 1.71
LINC01960-201ENST00000563759 ZSCAN29Q8IWY8 852 aaPredicted RBP25.76■■□□□ 1.71
LINC01960-201ENST00000563759 CLRN2A0PK11 232 aa25.75■■□□□ 1.71
LINC01960-201ENST00000563759 MYO1BO43795 1136 aa25.75■■□□□ 1.71
LINC01960-201ENST00000563759 CDK8P49336 464 aa25.75■■□□□ 1.71
LINC01960-201ENST00000563759 ZNF444Q8N0Y2 327 aaPredicted RBP25.75■■□□□ 1.71
LINC01960-201ENST00000563759 DHX36Q9H2U1 1008 aaKnown RBP25.75■■□□□ 1.71
LINC01960-201ENST00000563759 SENP2Q9HC62 589 aa25.75■■□□□ 1.71
LINC01960-201ENST00000563759 APOA5Q6Q788 366 aa25.74■■□□□ 1.71
LINC01960-201ENST00000563759 SERPINB13Q9UIV8 391 aa25.74■■□□□ 1.71
LINC01960-201ENST00000563759 SLC12A7Q9Y666 1083 aa25.74■■□□□ 1.71
LINC01960-201ENST00000563759 SHTN1A0MZ66 631 aa25.74■■□□□ 1.71
LINC01960-201ENST00000563759 TSPY3P0CV98 308 aa25.74■■□□□ 1.71
LINC01960-201ENST00000563759 TSPY8P0CW00 308 aa25.74■■□□□ 1.71
LINC01960-201ENST00000563759 ZFPM1Q8IX07 1006 aa25.74■■□□□ 1.71
LINC01960-201ENST00000563759 MICALL2Q8IY33 904 aa25.74■■□□□ 1.71
LINC01960-201ENST00000563759 TMTC2Q8N394 836 aa25.74■■□□□ 1.71
LINC01960-201ENST00000563759 DPF2Q92785 391 aa25.74■■□□□ 1.71
LINC01960-201ENST00000563759 CHMP4CQ96CF2 233 aa25.74■■□□□ 1.71
LINC01960-201ENST00000563759 COL2A1P02458 1487 aaPredicted RBP25.73■■□□□ 1.71
LINC01960-201ENST00000563759 ENTPD3O75355 529 aa25.73■■□□□ 1.71
LINC01960-201ENST00000563759 ZNF280AP59817 542 aaPredicted RBP25.73■■□□□ 1.71
LINC01960-201ENST00000563759 TFAP4Q01664 338 aa25.73■■□□□ 1.71
LINC01960-201ENST00000563759 SPDYE2Q495Y8 402 aa25.73■■□□□ 1.71
LINC01960-201ENST00000563759 MICU3Q86XE3 530 aa25.73■■□□□ 1.71
LINC01960-201ENST00000563759 RAB11FIP4Q86YS3 637 aa25.73■■□□□ 1.71
LINC01960-201ENST00000563759 ENAHQ8N8S7 591 aaPredicted RBP25.73■■□□□ 1.71
LINC01960-201ENST00000563759 NCOA5Q9HCD5 579 aaKnown RBP25.73■■□□□ 1.71
LINC01960-201ENST00000563759 RNF181Q9P0P0 153 aa25.73■■□□□ 1.71
LINC01960-201ENST00000563759 ZNF70Q9UC06 446 aaPredicted RBP25.73■■□□□ 1.71
LINC01960-201ENST00000563759 RASA1P20936 1047 aa25.72■■□□□ 1.71
LINC01960-201ENST00000563759 GJB2P29033 226 aa25.72■■□□□ 1.71
LINC01960-201ENST00000563759 IFIT1BQ5T764 474 aaKnown RBP25.72■■□□□ 1.71
LINC01960-201ENST00000563759 SYNE3Q6ZMZ3 975 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms