RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 MCTP1Q6DN14 999 aa6.47□□□□□ -1.37
CDR2-203ENST00000563573 PAOXQ6QHF9 649 aa6.47□□□□□ -1.37
CDR2-203ENST00000563573 SHKBP1Q8TBC3 707 aa6.47□□□□□ -1.37
CDR2-203ENST00000563573 ARID3AQ99856 593 aa6.47□□□□□ -1.37
CDR2-203ENST00000563573 LATS2Q9NRM7 1088 aa6.47□□□□□ -1.37
CDR2-203ENST00000563573 SPATA31D1Q6ZQQ2 1576 aa6.47□□□□□ -1.37
CDR2-203ENST00000563573 NEURL4Q96JN8 1562 aa6.47□□□□□ -1.37
CDR2-203ENST00000563573 ERVK-7P63135 1459 aa6.47□□□□□ -1.37
CDR2-203ENST00000563573 PIK3C2BO00750 1634 aa6.47□□□□□ -1.37
CDR2-203ENST00000563573 ADAMTSL3P82987 1691 aa6.46□□□□□ -1.37
CDR2-203ENST00000563573 MYO5BQ9ULV0 1848 aa6.46□□□□□ -1.37
CDR2-203ENST00000563573 A0A1W2PP55 124 aa6.46□□□□□ -1.38
CDR2-203ENST00000563573 WDR64B1ANS9 1081 aa6.46□□□□□ -1.38
CDR2-203ENST00000563573 SYNMO15061 1565 aa6.46□□□□□ -1.38
CDR2-203ENST00000563573 MED26O95402 600 aa6.46□□□□□ -1.38
CDR2-203ENST00000563573 IRAK1P51617 712 aa6.46□□□□□ -1.38
CDR2-203ENST00000563573 PCDH1Q08174 1060 aa6.46□□□□□ -1.38
CDR2-203ENST00000563573 DTX1Q86Y01 620 aa6.46□□□□□ -1.38
CDR2-203ENST00000563573 LIN7BQ9HAP6 207 aa6.46□□□□□ -1.38
CDR2-203ENST00000563573 MADDQ8WXG6 1647 aa6.46□□□□□ -1.38
CDR2-203ENST00000563573 TNRQ92752 1358 aa6.45□□□□□ -1.38
CDR2-203ENST00000563573 SPATA31E1Q6ZUB1 1445 aa6.45□□□□□ -1.38
CDR2-203ENST00000563573 FAM95CA0A1B0GW59 222 aa6.45□□□□□ -1.38
CDR2-203ENST00000563573 H3BRB1 525 aa6.45□□□□□ -1.38
CDR2-203ENST00000563573 PAX4O43316 350 aa6.45□□□□□ -1.38
CDR2-203ENST00000563573 WNT11O96014 354 aa6.45□□□□□ -1.38
CDR2-203ENST00000563573 POLR3DP05423 398 aaPredicted RBP6.45□□□□□ -1.38
CDR2-203ENST00000563573 SPINK2P20155 84 aa6.45□□□□□ -1.38
CDR2-203ENST00000563573 GP2P55259 537 aaKnown RBP6.45□□□□□ -1.38
CDR2-203ENST00000563573 SOX4Q06945 474 aaPredicted RBP6.45□□□□□ -1.38
CDR2-203ENST00000563573 KIAA0319Q5VV43 1072 aa6.45□□□□□ -1.38
CDR2-203ENST00000563573 THEMISQ8N1K5 641 aaPredicted RBP6.45□□□□□ -1.38
CDR2-203ENST00000563573 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.45□□□□□ -1.38
CDR2-203ENST00000563573 METTL22Q9BUU2 404 aaPredicted RBP6.45□□□□□ -1.38
CDR2-203ENST00000563573 TUT1Q9H6E5 874 aaKnown RBP6.45□□□□□ -1.38
CDR2-203ENST00000563573 PIM2Q9P1W9 311 aa6.45□□□□□ -1.38
CDR2-203ENST00000563573 LEMD3Q9Y2U8 911 aa6.45□□□□□ -1.38
CDR2-203ENST00000563573 UGGT1Q9NYU2 1555 aa6.44□□□□□ -1.38
CDR2-203ENST00000563573 PPLO60437 1756 aa6.44□□□□□ -1.38
CDR2-203ENST00000563573 TMEM131LA2VDJ0 1609 aa6.44□□□□□ -1.38
CDR2-203ENST00000563573 CARNS1A5YM72 827 aa6.44□□□□□ -1.38
CDR2-203ENST00000563573 CPNE3O75131 537 aaKnown RBP6.44□□□□□ -1.38
CDR2-203ENST00000563573 NFKBIBQ15653 356 aa6.44□□□□□ -1.38
CDR2-203ENST00000563573 SGO2Q562F6 1265 aa6.44□□□□□ -1.38
CDR2-203ENST00000563573 MFSD14AQ96MC6 490 aa6.44□□□□□ -1.38
CDR2-203ENST00000563573 TCF12Q99081 682 aa6.44□□□□□ -1.38
CDR2-203ENST00000563573 OSBPL1AQ9BXW6 950 aa6.44□□□□□ -1.38
CDR2-203ENST00000563573 DNAJC25Q9H1X3 360 aa6.44□□□□□ -1.38
CDR2-203ENST00000563573 KDM5AP29375 1690 aaKnown RBP6.44□□□□□ -1.38
CDR2-203ENST00000563573 IFT172Q9UG01 1749 aa6.44□□□□□ -1.38
CDR2-203ENST00000563573 UHRF1BP1Q6BDS2 1440 aa6.43□□□□□ -1.38
CDR2-203ENST00000563573 NLRP1Q9C000 1473 aa6.43□□□□□ -1.38
CDR2-203ENST00000563573 HNRNPUQ00839 825 aaKnown RBP eCLIP6.43□□□□□ -1.38
CDR2-203ENST00000563573 PTPN12Q05209 780 aaKnown RBP6.43□□□□□ -1.38
CDR2-203ENST00000563573 POU4F3Q15319 338 aa6.43□□□□□ -1.38
CDR2-203ENST00000563573 NBPF8Q3BBV2 869 aa6.43□□□□□ -1.38
CDR2-203ENST00000563573 CARD11Q9BXL7 1154 aa6.43□□□□□ -1.38
CDR2-203ENST00000563573 EHD4Q9H223 541 aa6.43□□□□□ -1.38
CDR2-203ENST00000563573 EID1Q9Y6B2 187 aa6.43□□□□□ -1.38
CDR2-203ENST00000563573 ADGRB3O60242 1522 aa6.43□□□□□ -1.38
CDR2-203ENST00000563573 UBR1Q8IWV7 1749 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 METTL12A8MUP2 240 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 DLGAP3O95886 979 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 DRD2P14416 443 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 MAOBP27338 520 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 GRIA4P48058 902 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 MAP7Q14244 749 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 ZNF423Q2M1K9 1284 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 SPRED3Q2MJR0 410 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 C2CD4AQ8NCU7 369 aaPredicted RBP6.42□□□□□ -1.38
CDR2-203ENST00000563573 EZH1Q92800 747 aaPredicted RBP6.42□□□□□ -1.38
CDR2-203ENST00000563573 FAM129BQ96TA1 746 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 CORO1BQ9BR76 489 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 KRTAP9-2Q9BYQ4 174 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 NRSN2Q9GZP1 204 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 RAD18Q9NS91 495 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 TRPM1Q7Z4N2 1603 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 KIAA1210Q9ULL0 1709 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 PRAG1Q86YV5 1406 aa6.42□□□□□ -1.38
CDR2-203ENST00000563573 B3GALT4O96024 378 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 FOSL1P15407 271 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 ITPKAP23677 461 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 SERPINB4P48594 390 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 ARHGAP4P98171 946 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 CYP27A1Q02318 531 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 AP3B2Q13367 1082 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 ECM1Q16610 540 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 RPS26P11Q5JNZ5 115 aaPredicted RBP6.41□□□□□ -1.38
CDR2-203ENST00000563573 FBXL6Q8N531 539 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 FBLIM1Q8WUP2 373 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 DMRTB1Q96MA1 342 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 TRAK1Q9UPV9 953 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 OAS3Q9Y6K5 1087 aaKnown RBP6.41□□□□□ -1.38
CDR2-203ENST00000563573 ADGRF5Q8IZF2 1346 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 SYNGAP1Q96PV0 1343 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 ROCK2O75116 1388 aaKnown RBP6.41□□□□□ -1.38
CDR2-203ENST00000563573 ZFYVE9O95405 1425 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 A2ML1A8K2U0 1454 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 PTPRMP28827 1452 aa6.41□□□□□ -1.38
CDR2-203ENST00000563573 MYOM2P54296 1465 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms