RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ANKRD13CQ8N6S4 541 aa23.06■■□□□ 1.28
NME3-204ENST00000563498 SPATA5Q8NB90 893 aa23.06■■□□□ 1.28
NME3-204ENST00000563498 NEUROD6Q96NK8 337 aa23.06■■□□□ 1.28
NME3-204ENST00000563498 PAK6Q9NQU5 681 aaPredicted RBP23.06■■□□□ 1.28
NME3-204ENST00000563498 LOC285556D6RIA3 1793 aa23.05■■□□□ 1.28
NME3-204ENST00000563498 CCDC84Q86UT8 332 aaPredicted RBP23.05■■□□□ 1.28
NME3-204ENST00000563498 ZNF280CQ8ND82 737 aa23.05■■□□□ 1.28
NME3-204ENST00000563498 RANBP2P49792 3224 aaKnown RBP23.04■■□□□ 1.28
NME3-204ENST00000563498 ZBTB7BO15156 539 aaPredicted RBP23.04■■□□□ 1.28
NME3-204ENST00000563498 ARID4AP29374 1257 aaPredicted RBP23.04■■□□□ 1.28
NME3-204ENST00000563498 GCLCP48506 637 aaPredicted RBP23.04■■□□□ 1.28
NME3-204ENST00000563498 PABPC4Q13310 644 aaKnown RBP eCLIP23.04■■□□□ 1.283e-7■■■■□ 23
NME3-204ENST00000563498 CRISPLD2Q9H0B8 497 aa23.04■■□□□ 1.28
NME3-204ENST00000563498 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.04■■□□□ 1.28
NME3-204ENST00000563498 FAM196BA6NMK8 535 aa23.03■■□□□ 1.28
NME3-204ENST00000563498 CAP2P40123 477 aa23.03■■□□□ 1.28
NME3-204ENST00000563498 SPP2Q13103 211 aa23.03■■□□□ 1.28
NME3-204ENST00000563498 GORABQ5T7V8 394 aa23.03■■□□□ 1.28
NME3-204ENST00000563498 DEFB118Q96PH6 123 aa23.03■■□□□ 1.28
NME3-204ENST00000563498 HERC5Q9UII4 1024 aaKnown RBP23.03■■□□□ 1.28
NME3-204ENST00000563498 TFRCP02786 760 aaKnown RBP23.02■■□□□ 1.28
NME3-204ENST00000563498 PI16Q6UXB8 463 aa23.02■■□□□ 1.28
NME3-204ENST00000563498 TBC1D9Q6ZT07 1266 aa23.02■■□□□ 1.28
NME3-204ENST00000563498 RAI14Q9P0K7 980 aa23.02■■□□□ 1.28
NME3-204ENST00000563498 A0A1W2PPC1 479 aa23.01■■□□□ 1.27
NME3-204ENST00000563498 SH3D19Q5HYK7 790 aa23.01■■□□□ 1.27
NME3-204ENST00000563498 SZT2Q5T011 3432 aa23.01■■□□□ 1.27
NME3-204ENST00000563498 ATAD5Q96QE3 1844 aa23.01■■□□□ 1.27
NME3-204ENST00000563498 USP17L5A8MUK1 530 aa23■■□□□ 1.27
NME3-204ENST00000563498 EVI5O60447 810 aa23■■□□□ 1.27
NME3-204ENST00000563498 GNAI2P04899 355 aa23■■□□□ 1.27
NME3-204ENST00000563498 UQCRFS1P1P0C7P4 283 aa23■■□□□ 1.27
NME3-204ENST00000563498 HMGCS2P54868 508 aa23■■□□□ 1.27
NME3-204ENST00000563498 AS3MTQ9HBK9 375 aa23■■□□□ 1.27
NME3-204ENST00000563498 IPO8O15397 1037 aaKnown RBP22.99■■□□□ 1.27
NME3-204ENST00000563498 MCAMP43121 646 aa22.99■■□□□ 1.27
NME3-204ENST00000563498 RRP1BQ14684 758 aaKnown RBP22.99■■□□□ 1.27
NME3-204ENST00000563498 TEX11Q8IYF3 940 aa22.99■■□□□ 1.27
NME3-204ENST00000563498 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.99■■□□□ 1.271e-12■■□□□ 11.8
NME3-204ENST00000563498 ASCC2Q9H1I8 757 aaPredicted RBP22.99■■□□□ 1.27
NME3-204ENST00000563498 DHX36Q9H2U1 1008 aaKnown RBP22.99■■□□□ 1.27
NME3-204ENST00000563498 LRP2BPQ9P2M1 347 aa22.99■■□□□ 1.27
NME3-204ENST00000563498 PI4KBQ9UBF8 816 aa22.99■■□□□ 1.27
NME3-204ENST00000563498 TAOK2Q9UL54 1235 aa22.99■■□□□ 1.27
NME3-204ENST00000563498 DOCK3Q8IZD9 2030 aa22.98■■□□□ 1.27
NME3-204ENST00000563498 HMGCRP04035 888 aa22.98■■□□□ 1.27
NME3-204ENST00000563498 G3BP1Q13283 466 aaKnown RBP eCLIP22.98■■□□□ 1.27
NME3-204ENST00000563498 ANKLE1Q8NAG6 615 aa22.98■■□□□ 1.27
NME3-204ENST00000563498 NOL10Q9BSC4 688 aaKnown RBP22.98■■□□□ 1.27
NME3-204ENST00000563498 WDR18Q9BV38 432 aa22.98■■□□□ 1.27
NME3-204ENST00000563498 TRIM27P14373 513 aa22.97■■□□□ 1.27
NME3-204ENST00000563498 MORF4L1Q9UBU8 362 aa22.97■■□□□ 1.27
NME3-204ENST00000563498 GJD2Q9UKL4 321 aa22.97■■□□□ 1.27
NME3-204ENST00000563498 PNMA6EA0A0J9YXQ4 647 aa22.96■■□□□ 1.27
NME3-204ENST00000563498 IGSF3O75054 1194 aa22.96■■□□□ 1.27
NME3-204ENST00000563498 BAG3O95817 575 aa22.96■■□□□ 1.27
NME3-204ENST00000563498 PLCG2P16885 1265 aa22.96■■□□□ 1.27
NME3-204ENST00000563498 ATF7IPQ6VMQ6 1270 aa22.96■■□□□ 1.27
NME3-204ENST00000563498 NECAB2Q7Z6G3 386 aa22.96■■□□□ 1.27
NME3-204ENST00000563498 SH3RF3Q8TEJ3 882 aaPredicted RBP22.96■■□□□ 1.27
NME3-204ENST00000563498 PAWRQ96IZ0 340 aaKnown RBP22.96■■□□□ 1.27
NME3-204ENST00000563498 GPR108Q9NPR9 543 aa22.96■■□□□ 1.27
NME3-204ENST00000563498 MAST2Q6P0Q8 1798 aa22.96■■□□□ 1.27
NME3-204ENST00000563498 ASNSP08243 561 aa22.95■■□□□ 1.26
NME3-204ENST00000563498 PPP4CP60510 307 aa22.95■■□□□ 1.26
NME3-204ENST00000563498 METTL16Q86W50 562 aaKnown RBP22.95■■□□□ 1.26
NME3-204ENST00000563498 RPTORQ8N122 1335 aa22.95■■□□□ 1.26
NME3-204ENST00000563498 SIPA1L1O43166 1804 aa22.94■■□□□ 1.26
NME3-204ENST00000563498 HOXA7P31268 230 aaPredicted RBP22.94■■□□□ 1.26
NME3-204ENST00000563498 BACE1P56817 501 aa22.94■■□□□ 1.26
NME3-204ENST00000563498 NAA16Q6N069 864 aaPredicted RBP22.94■■□□□ 1.26
NME3-204ENST00000563498 GINM1Q9NU53 330 aa22.94■■□□□ 1.26
NME3-204ENST00000563498 MTMR2Q13614 643 aa22.93■■□□□ 1.26
NME3-204ENST00000563498 FOXP4Q8IVH2 680 aaPredicted RBP22.93■■□□□ 1.26
NME3-204ENST00000563498 HMX1Q9NP08 348 aaPredicted RBP22.93■■□□□ 1.26
NME3-204ENST00000563498 AATFQ9NY61 560 aaKnown RBP eCLIP22.93■■□□□ 1.26
NME3-204ENST00000563498 TMOD4Q9NZQ9 345 aa22.93■■□□□ 1.26
NME3-204ENST00000563498 C19orf81C9J6K1 198 aa22.92■■□□□ 1.26
NME3-204ENST00000563498 IRX3P78415 501 aaPredicted RBP22.92■■□□□ 1.26
NME3-204ENST00000563498 DIS3LQ8TF46 1054 aaKnown RBP22.92■■□□□ 1.26
NME3-204ENST00000563498 FLT1P17948 1338 aa22.91■■□□□ 1.26
NME3-204ENST00000563498 ALPK3Q96L96 1907 aa22.91■■□□□ 1.26
NME3-204ENST00000563498 CCDC158Q5M9N0 1113 aa22.91■■□□□ 1.26
NME3-204ENST00000563498 TTC39AQ5SRH9 613 aa22.91■■□□□ 1.26
NME3-204ENST00000563498 ZNF512BQ96KM6 892 aaPredicted RBP22.91■■□□□ 1.26
NME3-204ENST00000563498 DNAJC18Q9H819 358 aa22.91■■□□□ 1.26
NME3-204ENST00000563498 PLXNB2O15031 1838 aa22.91■■□□□ 1.26
NME3-204ENST00000563498 FOCADQ5VW36 1801 aa22.91■■□□□ 1.26
NME3-204ENST00000563498 XRCC5P13010 732 aaKnown RBP22.9■■□□□ 1.26
NME3-204ENST00000563498 POLA2Q14181 598 aa22.9■■□□□ 1.26
NME3-204ENST00000563498 TNNI3KQ59H18 835 aa22.9■■□□□ 1.26
NME3-204ENST00000563498 MAPKAPK5Q8IW41 473 aa22.9■■□□□ 1.26
NME3-204ENST00000563498 GPRC5AQ8NFJ5 357 aa22.9■■□□□ 1.26
NME3-204ENST00000563498 TGFBRAP1Q8WUH2 860 aa22.9■■□□□ 1.26
NME3-204ENST00000563498 SOCS4Q8WXH5 440 aa22.9■■□□□ 1.26
NME3-204ENST00000563498 FRAT1Q92837 279 aaPredicted RBP22.9■■□□□ 1.26
NME3-204ENST00000563498 P2RX7Q99572 595 aaKnown RBP22.9■■□□□ 1.26
NME3-204ENST00000563498 NBPF3Q9H094 633 aa22.9■■□□□ 1.26
NME3-204ENST00000563498 SNRKQ9NRH2 765 aa22.9■■□□□ 1.26
NME3-204ENST00000563498 STAP2Q9UGK3 403 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms