RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 MAP4K4O95819 1239 aaPredicted RBP20.69■□□□□ 0.9
HDGFL3-203ENST00000563404 POLA2Q14181 598 aa20.69■□□□□ 0.9
HDGFL3-203ENST00000563404 TEX11Q8IYF3 940 aa20.69■□□□□ 0.9
HDGFL3-203ENST00000563404 ANKRD13CQ8N6S4 541 aa20.69■□□□□ 0.9
HDGFL3-203ENST00000563404 NKX2-3Q8TAU0 364 aa20.69■□□□□ 0.9
HDGFL3-203ENST00000563404 SNRKQ9NRH2 765 aa20.69■□□□□ 0.9
HDGFL3-203ENST00000563404 UQCRFS1P1P0C7P4 283 aa20.68■□□□□ 0.9
HDGFL3-203ENST00000563404 ELNP15502 786 aa20.68■□□□□ 0.9
HDGFL3-203ENST00000563404 UBXN2AP68543 259 aa20.68■□□□□ 0.9
HDGFL3-203ENST00000563404 SPP2Q13103 211 aa20.68■□□□□ 0.9
HDGFL3-203ENST00000563404 SMCR8Q8TEV9 937 aaPredicted RBP20.68■□□□□ 0.9
HDGFL3-203ENST00000563404 LRP2BPQ9P2M1 347 aa20.68■□□□□ 0.9
HDGFL3-203ENST00000563404 SIPA1L1O43166 1804 aa20.67■□□□□ 0.9
HDGFL3-203ENST00000563404 TNPO2O14787 897 aaKnown RBP20.67■□□□□ 0.9
HDGFL3-203ENST00000563404 CAP2P40123 477 aa20.67■□□□□ 0.9
HDGFL3-203ENST00000563404 TNNI3KQ59H18 835 aa20.67■□□□□ 0.9
HDGFL3-203ENST00000563404 ADGRA1Q86SQ6 560 aa20.67■□□□□ 0.9
HDGFL3-203ENST00000563404 PROCA1Q8NCQ7 364 aaPredicted RBP20.67■□□□□ 0.9
HDGFL3-203ENST00000563404 ZNF280CQ8ND82 737 aa20.67■□□□□ 0.9
HDGFL3-203ENST00000563404 DBNDD2Q9BQY9 259 aa20.67■□□□□ 0.9
HDGFL3-203ENST00000563404 FPGT-TNNI3KV9GXZ4 949 aa20.67■□□□□ 0.9
HDGFL3-203ENST00000563404 LOC285556D6RIA3 1793 aa20.67■□□□□ 0.9
HDGFL3-203ENST00000563404 INHAP05111 366 aa20.66■□□□□ 0.9
HDGFL3-203ENST00000563404 HMGCS2P54868 508 aa20.66■□□□□ 0.9
HDGFL3-203ENST00000563404 IRF5Q13568 498 aa20.66■□□□□ 0.9
HDGFL3-203ENST00000563404 SSH3Q8TE77 659 aa20.66■□□□□ 0.9
HDGFL3-203ENST00000563404 U2AF1L4Q8WU68 220 aaKnown RBP20.66■□□□□ 0.9
HDGFL3-203ENST00000563404 GPR108Q9NPR9 543 aa20.66■□□□□ 0.9
HDGFL3-203ENST00000563404 AATFQ9NY61 560 aaKnown RBP eCLIP20.66■□□□□ 0.9
HDGFL3-203ENST00000563404 ATAD5Q96QE3 1844 aa20.66■□□□□ 0.9
HDGFL3-203ENST00000563404 CYP2E1P05181 493 aaPredicted RBP20.65■□□□□ 0.9
HDGFL3-203ENST00000563404 JAG1P78504 1218 aa20.65■□□□□ 0.9
HDGFL3-203ENST00000563404 ATP8B2P98198 1209 aa20.65■□□□□ 0.9
HDGFL3-203ENST00000563404 ZKSCAN2Q63HK3 967 aa20.65■□□□□ 0.9
HDGFL3-203ENST00000563404 NAA16Q6N069 864 aaPredicted RBP20.65■□□□□ 0.9
HDGFL3-203ENST00000563404 PXYLP1Q8TE99 480 aa20.65■□□□□ 0.9
HDGFL3-203ENST00000563404 DPF3Q92784 378 aa20.65■□□□□ 0.9
HDGFL3-203ENST00000563404 C1orf115Q9H7X2 142 aa20.65■□□□□ 0.9
HDGFL3-203ENST00000563404 DNAJC18Q9H819 358 aa20.65■□□□□ 0.9
HDGFL3-203ENST00000563404 RANBP2P49792 3224 aaKnown RBP20.65■□□□□ 0.9
HDGFL3-203ENST00000563404 SZT2Q5T011 3432 aa20.64■□□□□ 0.89
HDGFL3-203ENST00000563404 USP17L5A8MUK1 530 aa20.64■□□□□ 0.89
HDGFL3-203ENST00000563404 SGPL1O95470 568 aa20.64■□□□□ 0.89
HDGFL3-203ENST00000563404 FAM110CQ1W6H9 321 aa20.64■□□□□ 0.89
HDGFL3-203ENST00000563404 SHROOM1Q2M3G4 852 aaPredicted RBP20.64■□□□□ 0.89
HDGFL3-203ENST00000563404 SH3D19Q5HYK7 790 aa20.64■□□□□ 0.89
HDGFL3-203ENST00000563404 TTC39AQ5SRH9 613 aa20.64■□□□□ 0.89
HDGFL3-203ENST00000563404 HERC5Q9UII4 1024 aaKnown RBP20.64■□□□□ 0.89
HDGFL3-203ENST00000563404 PNMA3Q9UL41 463 aa20.64■□□□□ 0.89
HDGFL3-203ENST00000563404 DOCK3Q8IZD9 2030 aa20.64■□□□□ 0.89
HDGFL3-203ENST00000563404 PPP4CP60510 307 aa20.63■□□□□ 0.89
HDGFL3-203ENST00000563404 CHRDL2Q6WN34 429 aa20.63■□□□□ 0.89
HDGFL3-203ENST00000563404 MAPKAPK5Q8IW41 473 aa20.63■□□□□ 0.89
HDGFL3-203ENST00000563404 TGFBRAP1Q8WUH2 860 aa20.63■□□□□ 0.89
HDGFL3-203ENST00000563404 TBC1D2Q9BYX2 928 aa20.63■□□□□ 0.89
HDGFL3-203ENST00000563404 PI4KBQ9UBF8 816 aa20.63■□□□□ 0.89
HDGFL3-203ENST00000563404 MAST2Q6P0Q8 1798 aa20.63■□□□□ 0.89
HDGFL3-203ENST00000563404 TRIOBPQ9H2D6 2365 aa20.63■□□□□ 0.89
HDGFL3-203ENST00000563404 FLT1P17948 1338 aa20.62■□□□□ 0.89
HDGFL3-203ENST00000563404 FARP2O94887 1054 aaPredicted RBP20.62■□□□□ 0.89
HDGFL3-203ENST00000563404 ZAP70P43403 619 aa20.62■□□□□ 0.89
HDGFL3-203ENST00000563404 CCDC158Q5M9N0 1113 aa20.62■□□□□ 0.89
HDGFL3-203ENST00000563404 METTL16Q86W50 562 aaKnown RBP20.62■□□□□ 0.89
HDGFL3-203ENST00000563404 ASCC2Q9H1I8 757 aaPredicted RBP20.62■□□□□ 0.89
HDGFL3-203ENST00000563404 PIH1D3Q9NQM4 214 aaKnown RBP20.62■□□□□ 0.89
HDGFL3-203ENST00000563404 TLR7Q9NYK1 1049 aaKnown RBP20.62■□□□□ 0.89
HDGFL3-203ENST00000563404 MYO5AQ9Y4I1 1855 aaKnown RBP20.62■□□□□ 0.89
HDGFL3-203ENST00000563404 CDK5RAP2Q96SN8 1893 aa20.61■□□□□ 0.89
HDGFL3-203ENST00000563404 SURF6O75683 361 aaKnown RBP20.61■□□□□ 0.89
HDGFL3-203ENST00000563404 BAG3O95817 575 aa20.61■□□□□ 0.89
HDGFL3-203ENST00000563404 RLBP1P12271 317 aa20.61■□□□□ 0.89
HDGFL3-203ENST00000563404 COA7Q96BR5 231 aa20.61■□□□□ 0.89
HDGFL3-203ENST00000563404 ZNF512BQ96KM6 892 aaPredicted RBP20.61■□□□□ 0.89
HDGFL3-203ENST00000563404 NOL10Q9BSC4 688 aaKnown RBP20.61■□□□□ 0.89
HDGFL3-203ENST00000563404 WDR18Q9BV38 432 aa20.61■□□□□ 0.89
HDGFL3-203ENST00000563404 DHX36Q9H2U1 1008 aaKnown RBP20.61■□□□□ 0.89
HDGFL3-203ENST00000563404 PAK6Q9NQU5 681 aaPredicted RBP20.61■□□□□ 0.89
HDGFL3-203ENST00000563404 DBNLQ9UJU6 430 aaKnown RBP20.61■□□□□ 0.89
HDGFL3-203ENST00000563404 TAOK2Q9UL54 1235 aa20.61■□□□□ 0.89
HDGFL3-203ENST00000563404 PEX10O60683 326 aa20.6■□□□□ 0.89
HDGFL3-203ENST00000563404 GCLCP48506 637 aaPredicted RBP20.6■□□□□ 0.89
HDGFL3-203ENST00000563404 OS9Q13438 667 aaPredicted RBP20.6■□□□□ 0.89
HDGFL3-203ENST00000563404 MTMR2Q13614 643 aa20.6■□□□□ 0.89
HDGFL3-203ENST00000563404 DEFB118Q96PH6 123 aa20.6■□□□□ 0.89
HDGFL3-203ENST00000563404 HTATIP2Q9BUP3 242 aa20.6■□□□□ 0.89
HDGFL3-203ENST00000563404 RBM27Q9P2N5 1060 aaKnown RBP20.6■□□□□ 0.89
HDGFL3-203ENST00000563404 GJD2Q9UKL4 321 aa20.6■□□□□ 0.89
HDGFL3-203ENST00000563404 PALD1Q9ULE6 856 aa20.6■□□□□ 0.89
HDGFL3-203ENST00000563404 NOP58Q9Y2X3 529 aaKnown RBP20.6■□□□□ 0.89
HDGFL3-203ENST00000563404 ZBTB7BO15156 539 aaPredicted RBP20.59■□□□□ 0.89
HDGFL3-203ENST00000563404 PLCG2P16885 1265 aa20.59■□□□□ 0.89
HDGFL3-203ENST00000563404 DYNLL1P63167 89 aaKnown RBP20.59■□□□□ 0.89
HDGFL3-203ENST00000563404 PABPC4Q13310 644 aaKnown RBP eCLIP20.59■□□□□ 0.89
HDGFL3-203ENST00000563404 CCDC8Q9H0W5 538 aaPredicted RBP20.59■□□□□ 0.89
HDGFL3-203ENST00000563404 AS3MTQ9HBK9 375 aa20.59■□□□□ 0.89
HDGFL3-203ENST00000563404 FOCADQ5VW36 1801 aa20.59■□□□□ 0.89
HDGFL3-203ENST00000563404 GDF11O95390 407 aa20.58■□□□□ 0.89
HDGFL3-203ENST00000563404 TFRCP02786 760 aaKnown RBP20.58■□□□□ 0.89
HDGFL3-203ENST00000563404 BACE1P56817 501 aa20.58■□□□□ 0.89
HDGFL3-203ENST00000563404 TRIM32Q13049 653 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms