RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 ANKLE1Q8NAG6 615 aa19.45■□□□□ 0.7
HERPUD1-205ENST00000562914 ZNF280CQ8ND82 737 aa19.45■□□□□ 0.7
HERPUD1-205ENST00000562914 MEIS3Q99687 375 aa19.45■□□□□ 0.7
HERPUD1-205ENST00000562914 HERC5Q9UII4 1024 aaKnown RBP19.45■□□□□ 0.7
HERPUD1-205ENST00000562914 TFCP2Q12800 502 aa19.44■□□□□ 0.7
HERPUD1-205ENST00000562914 NSUN4Q96CB9 384 aaKnown RBP19.44■□□□□ 0.7
HERPUD1-205ENST00000562914 CDCA7LQ96GN5 454 aa19.44■□□□□ 0.7
HERPUD1-205ENST00000562914 AS3MTQ9HBK9 375 aa19.44■□□□□ 0.7
HERPUD1-205ENST00000562914 CAP2P40123 477 aa19.43■□□□□ 0.7
HERPUD1-205ENST00000562914 SPP2Q13103 211 aa19.43■□□□□ 0.7
HERPUD1-205ENST00000562914 SH3D19Q5HYK7 790 aa19.43■□□□□ 0.7
HERPUD1-205ENST00000562914 TREML2Q5T2D2 321 aa19.43■□□□□ 0.7
HERPUD1-205ENST00000562914 GORABQ5T7V8 394 aa19.43■□□□□ 0.7
HERPUD1-205ENST00000562914 NECAB2Q7Z6G3 386 aa19.43■□□□□ 0.7
HERPUD1-205ENST00000562914 SPATA5Q8NB90 893 aa19.43■□□□□ 0.7
HERPUD1-205ENST00000562914 HMG20BQ9P0W2 317 aa19.43■□□□□ 0.7
HERPUD1-205ENST00000562914 USP17L5A8MUK1 530 aa19.42■□□□□ 0.7
HERPUD1-205ENST00000562914 IGSF3O75054 1194 aa19.42■□□□□ 0.7
HERPUD1-205ENST00000562914 HMGCRP04035 888 aa19.42■□□□□ 0.7
HERPUD1-205ENST00000562914 ARID4AP29374 1257 aaPredicted RBP19.42■□□□□ 0.7
HERPUD1-205ENST00000562914 NEUROD6Q96NK8 337 aa19.42■□□□□ 0.7
HERPUD1-205ENST00000562914 NOL10Q9BSC4 688 aaKnown RBP19.42■□□□□ 0.7
HERPUD1-205ENST00000562914 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.42■□□□□ 0.78e-7■■■■□ 22.8
HERPUD1-205ENST00000562914 DHX36Q9H2U1 1008 aaKnown RBP19.42■□□□□ 0.7
HERPUD1-205ENST00000562914 TAOK2Q9UL54 1235 aa19.42■□□□□ 0.7
HERPUD1-205ENST00000562914 LOC285556D6RIA3 1793 aa19.42■□□□□ 0.7
HERPUD1-205ENST00000562914 UQCRFS1P1P0C7P4 283 aa19.41■□□□□ 0.7
HERPUD1-205ENST00000562914 ZNF384Q8TF68 577 aa19.41■□□□□ 0.7
HERPUD1-205ENST00000562914 RPTORQ8N122 1335 aa19.41■□□□□ 0.7
HERPUD1-205ENST00000562914 RANBP2P49792 3224 aaKnown RBP19.41■□□□□ 0.7
HERPUD1-205ENST00000562914 PLCG2P16885 1265 aa19.4■□□□□ 0.7
HERPUD1-205ENST00000562914 HMGCS2P54868 508 aa19.4■□□□□ 0.7
HERPUD1-205ENST00000562914 PAWRQ96IZ0 340 aaKnown RBP19.4■□□□□ 0.7
HERPUD1-205ENST00000562914 HMX1Q9NP08 348 aaPredicted RBP19.4■□□□□ 0.7
HERPUD1-205ENST00000562914 GINM1Q9NU53 330 aa19.4■□□□□ 0.7
HERPUD1-205ENST00000562914 RAI14Q9P0K7 980 aa19.4■□□□□ 0.7
HERPUD1-205ENST00000562914 PI4KBQ9UBF8 816 aa19.4■□□□□ 0.7
HERPUD1-205ENST00000562914 MORF4L1Q9UBU8 362 aa19.4■□□□□ 0.7
HERPUD1-205ENST00000562914 SZT2Q5T011 3432 aa19.4■□□□□ 0.7
HERPUD1-205ENST00000562914 BAG3O95817 575 aa19.39■□□□□ 0.69
HERPUD1-205ENST00000562914 ASNSP08243 561 aa19.39■□□□□ 0.69
HERPUD1-205ENST00000562914 SLURP2P0DP57 97 aa19.39■□□□□ 0.69
HERPUD1-205ENST00000562914 RARSP54136 660 aaKnown RBP19.39■□□□□ 0.69
HERPUD1-205ENST00000562914 CCDC84Q86UT8 332 aaPredicted RBP19.39■□□□□ 0.69
HERPUD1-205ENST00000562914 TEX11Q8IYF3 940 aa19.39■□□□□ 0.69
HERPUD1-205ENST00000562914 WDR18Q9BV38 432 aa19.39■□□□□ 0.69
HERPUD1-205ENST00000562914 ASCC2Q9H1I8 757 aaPredicted RBP19.39■□□□□ 0.69
HERPUD1-205ENST00000562914 LRP2BPQ9P2M1 347 aa19.39■□□□□ 0.69
HERPUD1-205ENST00000562914 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.39■□□□□ 0.69
HERPUD1-205ENST00000562914 FAM196BA6NMK8 535 aa19.38■□□□□ 0.69
HERPUD1-205ENST00000562914 IPO8O15397 1037 aaKnown RBP19.38■□□□□ 0.69
HERPUD1-205ENST00000562914 HOXA7P31268 230 aaPredicted RBP19.38■□□□□ 0.69
HERPUD1-205ENST00000562914 BMP8BP34820 402 aa19.38■□□□□ 0.69
HERPUD1-205ENST00000562914 GJD2Q9UKL4 321 aa19.38■□□□□ 0.69
HERPUD1-205ENST00000562914 C19orf81C9J6K1 198 aa19.37■□□□□ 0.69
HERPUD1-205ENST00000562914 GNAI2P04899 355 aa19.37■□□□□ 0.69
HERPUD1-205ENST00000562914 BACE1P56817 501 aa19.37■□□□□ 0.69
HERPUD1-205ENST00000562914 IRX3P78415 501 aaPredicted RBP19.37■□□□□ 0.69
HERPUD1-205ENST00000562914 G3BP1Q13283 466 aaKnown RBP eCLIP19.37■□□□□ 0.69
HERPUD1-205ENST00000562914 GPR153Q6NV75 609 aa19.37■□□□□ 0.69
HERPUD1-205ENST00000562914 TRMT44Q8IYL2 757 aaKnown RBP19.37■□□□□ 0.69
HERPUD1-205ENST00000562914 SOCS4Q8WXH5 440 aa19.37■□□□□ 0.69
HERPUD1-205ENST00000562914 NBPF3Q9H094 633 aa19.37■□□□□ 0.69
HERPUD1-205ENST00000562914 TMOD4Q9NZQ9 345 aa19.37■□□□□ 0.69
HERPUD1-205ENST00000562914 XRCC5P13010 732 aaKnown RBP19.36■□□□□ 0.69
HERPUD1-205ENST00000562914 TBC1D9Q6ZT07 1266 aa19.36■□□□□ 0.69
HERPUD1-205ENST00000562914 FOXP4Q8IVH2 680 aaPredicted RBP19.36■□□□□ 0.69
HERPUD1-205ENST00000562914 GTF3C2Q8WUA4 911 aaPredicted RBP19.36■□□□□ 0.69
HERPUD1-205ENST00000562914 ATAD5Q96QE3 1844 aa19.35■□□□□ 0.69
HERPUD1-205ENST00000562914 MCAMP43121 646 aa19.35■□□□□ 0.69
HERPUD1-205ENST00000562914 PPP4CP60510 307 aa19.35■□□□□ 0.69
HERPUD1-205ENST00000562914 PI16Q6UXB8 463 aa19.35■□□□□ 0.69
HERPUD1-205ENST00000562914 METTL16Q86W50 562 aaKnown RBP19.35■□□□□ 0.69
HERPUD1-205ENST00000562914 GDF15Q99988 308 aa19.35■□□□□ 0.69
HERPUD1-205ENST00000562914 GPR108Q9NPR9 543 aa19.35■□□□□ 0.69
HERPUD1-205ENST00000562914 STAP2Q9UGK3 403 aa19.35■□□□□ 0.69
HERPUD1-205ENST00000562914 NAA16Q6N069 864 aaPredicted RBP19.34■□□□□ 0.69
HERPUD1-205ENST00000562914 ATF7IPQ6VMQ6 1270 aa19.34■□□□□ 0.69
HERPUD1-205ENST00000562914 GPRC5AQ8NFJ5 357 aa19.34■□□□□ 0.69
HERPUD1-205ENST00000562914 SH3RF3Q8TEJ3 882 aaPredicted RBP19.34■□□□□ 0.69
HERPUD1-205ENST00000562914 NUDT12Q9BQG2 462 aa19.34■□□□□ 0.69
HERPUD1-205ENST00000562914 TRIM34Q9BYJ4 488 aa19.34■□□□□ 0.69
HERPUD1-205ENST00000562914 OGDHLQ9ULD0 1010 aa19.34■□□□□ 0.69
HERPUD1-205ENST00000562914 USP17L10C9JJH3 530 aa19.33■□□□□ 0.68
HERPUD1-205ENST00000562914 MAPK4P31152 587 aa19.33■□□□□ 0.68
HERPUD1-205ENST00000562914 MTMR2Q13614 643 aa19.33■□□□□ 0.68
HERPUD1-205ENST00000562914 PDE3AQ14432 1141 aa19.33■□□□□ 0.68
HERPUD1-205ENST00000562914 RRP1BQ14684 758 aaKnown RBP19.33■□□□□ 0.68
HERPUD1-205ENST00000562914 CCDC158Q5M9N0 1113 aa19.33■□□□□ 0.68
HERPUD1-205ENST00000562914 MAP3K21Q5TCX8 1036 aa19.33■□□□□ 0.68
HERPUD1-205ENST00000562914 CERS3Q8IU89 383 aa19.33■□□□□ 0.68
HERPUD1-205ENST00000562914 DIS3LQ8TF46 1054 aaKnown RBP19.33■□□□□ 0.68
HERPUD1-205ENST00000562914 C11orf49Q9H6J7 331 aa19.33■□□□□ 0.68
HERPUD1-205ENST00000562914 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.33■□□□□ 0.68
HERPUD1-205ENST00000562914 DOCK3Q8IZD9 2030 aa19.33■□□□□ 0.68
HERPUD1-205ENST00000562914 MAST2Q6P0Q8 1798 aa19.32■□□□□ 0.68
HERPUD1-205ENST00000562914 HERVK_113P62684 666 aa19.32■□□□□ 0.68
HERPUD1-205ENST00000562914 CRACR2BQ8N4Y2 399 aaPredicted RBP19.32■□□□□ 0.68
HERPUD1-205ENST00000562914 TRIB2Q92519 343 aa19.32■□□□□ 0.68
HERPUD1-205ENST00000562914 ZNF512BQ96KM6 892 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms