RNA–Protein interactions for RNA: ENST00000562664.5

PPP4C-204, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 3

Gene PPP4C, Length 941 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-204ENST00000562664 TEX11Q8IYF3 940 aa29.12■■■□□ 2.25
PPP4C-204ENST00000562664 DBNDD2Q9BQY9 259 aa29.12■■■□□ 2.25
PPP4C-204ENST00000562664 LRP2BPQ9P2M1 347 aa29.12■■■□□ 2.25
PPP4C-204ENST00000562664 TREML2Q5T2D2 321 aa29.11■■■□□ 2.25
PPP4C-204ENST00000562664 SH3RF3Q8TEJ3 882 aaPredicted RBP29.11■■■□□ 2.25
PPP4C-204ENST00000562664 CCL5P13501 91 aa29.1■■■□□ 2.25
PPP4C-204ENST00000562664 RRP1BQ14684 758 aaKnown RBP29.1■■■□□ 2.25
PPP4C-204ENST00000562664 PROCA1Q8NCQ7 364 aaPredicted RBP29.1■■■□□ 2.25
PPP4C-204ENST00000562664 SLAIN1Q8ND83 568 aa29.1■■■□□ 2.25
PPP4C-204ENST00000562664 SMCR8Q8TEV9 937 aaPredicted RBP29.1■■■□□ 2.25
PPP4C-204ENST00000562664 SNRKQ9NRH2 765 aa29.1■■■□□ 2.25
PPP4C-204ENST00000562664 CAP2P40123 477 aa29.09■■■□□ 2.25
PPP4C-204ENST00000562664 ATP8B2P98198 1209 aa29.09■■■□□ 2.25
PPP4C-204ENST00000562664 TTC39AQ5SRH9 613 aa29.09■■■□□ 2.25
PPP4C-204ENST00000562664 C1orf115Q9H7X2 142 aa29.09■■■□□ 2.25
PPP4C-204ENST00000562664 GJB1P08034 283 aa29.08■■■□□ 2.25
PPP4C-204ENST00000562664 GJA8P48165 433 aa29.08■■■□□ 2.25
PPP4C-204ENST00000562664 NKX2-3Q8TAU0 364 aa29.08■■■□□ 2.25
PPP4C-204ENST00000562664 HERC5Q9UII4 1024 aaKnown RBP29.08■■■□□ 2.25
PPP4C-204ENST00000562664 MYH1P12882 1939 aa29.08■■■□□ 2.25
PPP4C-204ENST00000562664 CYP2E1P05181 493 aaPredicted RBP29.07■■■□□ 2.24
PPP4C-204ENST00000562664 UBXN2AP68543 259 aa29.07■■■□□ 2.24
PPP4C-204ENST00000562664 SPP2Q13103 211 aa29.07■■■□□ 2.24
PPP4C-204ENST00000562664 NAA16Q6N069 864 aaPredicted RBP29.07■■■□□ 2.24
PPP4C-204ENST00000562664 UBE2Q1Q7Z7E8 422 aa29.07■■■□□ 2.24
PPP4C-204ENST00000562664 ADGRA1Q86SQ6 560 aa29.07■■■□□ 2.24
PPP4C-204ENST00000562664 ZNF280CQ8ND82 737 aa29.07■■■□□ 2.24
PPP4C-204ENST00000562664 TBC1D2Q9BYX2 928 aa29.07■■■□□ 2.24
PPP4C-204ENST00000562664 AATFQ9NY61 560 aaKnown RBP eCLIP29.07■■■□□ 2.24
PPP4C-204ENST00000562664 PLXNB2O15031 1838 aa29.06■■■□□ 2.24
PPP4C-204ENST00000562664 TNPO2O14787 897 aaKnown RBP29.06■■■□□ 2.24
PPP4C-204ENST00000562664 FLT3LGP49771 235 aa29.06■■■□□ 2.24
PPP4C-204ENST00000562664 OS9Q13438 667 aaPredicted RBP29.06■■■□□ 2.24
PPP4C-204ENST00000562664 CCDC158Q5M9N0 1113 aa29.06■■■□□ 2.24
PPP4C-204ENST00000562664 ANKRD13CQ8N6S4 541 aa29.06■■■□□ 2.24
PPP4C-204ENST00000562664 ZNF512BQ96KM6 892 aaPredicted RBP29.06■■■□□ 2.24
PPP4C-204ENST00000562664 NOL10Q9BSC4 688 aaKnown RBP29.06■■■□□ 2.24
PPP4C-204ENST00000562664 RNF208Q9H0X6 261 aa29.06■■■□□ 2.24
PPP4C-204ENST00000562664 PNMA3Q9UL41 463 aa29.06■■■□□ 2.24
PPP4C-204ENST00000562664 ADCY3O60266 1144 aa29.05■■■□□ 2.24
PPP4C-204ENST00000562664 SURF6O75683 361 aaKnown RBP29.05■■■□□ 2.24
PPP4C-204ENST00000562664 RLBP1P12271 317 aa29.05■■■□□ 2.24
PPP4C-204ENST00000562664 PPP4CP60510 307 aa29.05■■■□□ 2.24
PPP4C-204ENST00000562664 IRF5Q13568 498 aa29.05■■■□□ 2.24
PPP4C-204ENST00000562664 FAM110CQ1W6H9 321 aa29.05■■■□□ 2.24
PPP4C-204ENST00000562664 BIN2Q9UBW5 565 aaPredicted RBP29.05■■■□□ 2.24
PPP4C-204ENST00000562664 NOP58Q9Y2X3 529 aaKnown RBP29.05■■■□□ 2.24
PPP4C-204ENST00000562664 FLT1P17948 1338 aa29.04■■■□□ 2.24
PPP4C-204ENST00000562664 BAG3O95817 575 aa29.04■■■□□ 2.24
PPP4C-204ENST00000562664 PLCG2P16885 1265 aa29.04■■■□□ 2.24
PPP4C-204ENST00000562664 HMGCS2P54868 508 aa29.04■■■□□ 2.24
PPP4C-204ENST00000562664 UNC93B1Q9H1C4 597 aa29.04■■■□□ 2.24
PPP4C-204ENST00000562664 DHX36Q9H2U1 1008 aaKnown RBP29.04■■■□□ 2.24
PPP4C-204ENST00000562664 DNAJC18Q9H819 358 aa29.04■■■□□ 2.24
PPP4C-204ENST00000562664 PI4KBQ9UBF8 816 aa29.04■■■□□ 2.24
PPP4C-204ENST00000562664 DBNLQ9UJU6 430 aaKnown RBP29.04■■■□□ 2.24
PPP4C-204ENST00000562664 TRIOBPQ9H2D6 2365 aa29.04■■■□□ 2.24
PPP4C-204ENST00000562664 USP17L5A8MUK1 530 aa29.03■■■□□ 2.24
PPP4C-204ENST00000562664 H0YGN5 161 aa29.03■■■□□ 2.24
PPP4C-204ENST00000562664 ELNP15502 786 aa29.03■■■□□ 2.24
PPP4C-204ENST00000562664 HNRNPUQ00839 825 aaKnown RBP eCLIP29.03■■■□□ 2.24
PPP4C-204ENST00000562664 SH3D19Q5HYK7 790 aa29.03■■■□□ 2.24
PPP4C-204ENST00000562664 FTSJ3Q8IY81 847 aaKnown RBP29.03■■■□□ 2.24
PPP4C-204ENST00000562664 PXYLP1Q8TE99 480 aa29.03■■■□□ 2.24
PPP4C-204ENST00000562664 TLR7Q9NYK1 1049 aaKnown RBP29.03■■■□□ 2.24
PPP4C-204ENST00000562664 ZBTB7BO15156 539 aaPredicted RBP29.02■■■□□ 2.24
PPP4C-204ENST00000562664 IGSF3O75054 1194 aa29.02■■■□□ 2.24
PPP4C-204ENST00000562664 ZAP70P43403 619 aa29.02■■■□□ 2.24
PPP4C-204ENST00000562664 METTL16Q86W50 562 aaKnown RBP29.02■■■□□ 2.24
PPP4C-204ENST00000562664 MAPKAPK5Q8IW41 473 aa29.02■■■□□ 2.24
PPP4C-204ENST00000562664 ITPRIPQ8IWB1 547 aa29.02■■■□□ 2.24
PPP4C-204ENST00000562664 TGFBRAP1Q8WUH2 860 aa29.02■■■□□ 2.24
PPP4C-204ENST00000562664 PIH1D3Q9NQM4 214 aaKnown RBP29.02■■■□□ 2.24
PPP4C-204ENST00000562664 COLQQ9Y215 455 aaPredicted RBP29.02■■■□□ 2.24
PPP4C-204ENST00000562664 INHAP05111 366 aa29.01■■■□□ 2.23
PPP4C-204ENST00000562664 U2AF1L4Q8WU68 220 aaKnown RBP29.01■■■□□ 2.23
PPP4C-204ENST00000562664 ALPK3Q96L96 1907 aa29■■■□□ 2.23
PPP4C-204ENST00000562664 DDX60LQ5H9U9 1706 aaKnown RBP29■■■□□ 2.23
PPP4C-204ENST00000562664 FXR1P51114 621 aaKnown RBP eCLIP29■■■□□ 2.23
PPP4C-204ENST00000562664 WDR18Q9BV38 432 aa29■■■□□ 2.23
PPP4C-204ENST00000562664 AS3MTQ9HBK9 375 aa29■■■□□ 2.23
PPP4C-204ENST00000562664 GCLCP48506 637 aaPredicted RBP28.99■■■□□ 2.23
PPP4C-204ENST00000562664 JAG1P78504 1218 aa28.99■■■□□ 2.23
PPP4C-204ENST00000562664 PABPC4Q13310 644 aaKnown RBP eCLIP28.99■■■□□ 2.232e-6■□□□□ 9.9
PPP4C-204ENST00000562664 EAF2Q96CJ1 260 aaPredicted RBP28.99■■■□□ 2.23
PPP4C-204ENST00000562664 ASCC2Q9H1I8 757 aaPredicted RBP28.99■■■□□ 2.23
PPP4C-204ENST00000562664 COA7Q96BR5 231 aa28.98■■■□□ 2.23
PPP4C-204ENST00000562664 CCDC8Q9H0W5 538 aaPredicted RBP28.98■■■□□ 2.23
PPP4C-204ENST00000562664 SGPL1O95470 568 aa28.97■■■□□ 2.23
PPP4C-204ENST00000562664 ASNSP08243 561 aa28.97■■■□□ 2.23
PPP4C-204ENST00000562664 MTMR2Q13614 643 aa28.97■■■□□ 2.23
PPP4C-204ENST00000562664 SHROOM1Q2M3G4 852 aaPredicted RBP28.97■■■□□ 2.23
PPP4C-204ENST00000562664 PALD1Q9ULE6 856 aa28.97■■■□□ 2.23
PPP4C-204ENST00000562664 NAV1Q8NEY1 1877 aa28.96■■■□□ 2.23
PPP4C-204ENST00000562664 FARP2O94887 1054 aaPredicted RBP28.96■■■□□ 2.23
PPP4C-204ENST00000562664 DYNLL1P63167 89 aaKnown RBP28.96■■■□□ 2.23
PPP4C-204ENST00000562664 CEP85Q6P2H3 762 aa28.96■■■□□ 2.23
PPP4C-204ENST00000562664 PAK6Q9NQU5 681 aaPredicted RBP28.96■■■□□ 2.23
PPP4C-204ENST00000562664 BACE1P56817 501 aa28.95■■■□□ 2.22
PPP4C-204ENST00000562664 FOXP4Q8IVH2 680 aaPredicted RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms