RNA–Protein interactions for RNA: ENST00000562083.1

CCP110-205, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-205ENST00000562083 SUGT1Q9Y2Z0 365 aa16.3■□□□□ 0.2
CCP110-205ENST00000562083 LRRFIP2Q9Y608 721 aaKnown RBP16.3■□□□□ 0.2
CCP110-205ENST00000562083 FAM196BA6NMK8 535 aa16.29■□□□□ 0.2
CCP110-205ENST00000562083 APAF1O14727 1248 aa16.29■□□□□ 0.2
CCP110-205ENST00000562083 XRCC5P13010 732 aaKnown RBP16.29■□□□□ 0.2
CCP110-205ENST00000562083 EPHB4P54760 987 aa16.29■□□□□ 0.2
CCP110-205ENST00000562083 HMGCS2P54868 508 aa16.29■□□□□ 0.2
CCP110-205ENST00000562083 SPP2Q13103 211 aa16.29■□□□□ 0.2
CCP110-205ENST00000562083 POTEEQ6S8J3 1075 aa16.29■□□□□ 0.2
CCP110-205ENST00000562083 NUDT12Q9BQG2 462 aa16.29■□□□□ 0.2
CCP110-205ENST00000562083 PRDM5Q9NQX1 630 aaPredicted RBP16.29■□□□□ 0.2
CCP110-205ENST00000562083 MORF4L1Q9UBU8 362 aa16.29■□□□□ 0.2
CCP110-205ENST00000562083 TRIM43BA6NCK2 446 aa16.28■□□□□ 0.2
CCP110-205ENST00000562083 CTNND1O60716 968 aaKnown RBP16.28■□□□□ 0.2
CCP110-205ENST00000562083 PRDX5P30044 214 aa16.28■□□□□ 0.2
CCP110-205ENST00000562083 PDE3AQ14432 1141 aa16.28■□□□□ 0.2
CCP110-205ENST00000562083 CAVIN4Q5BKX8 364 aa16.28■□□□□ 0.2
CCP110-205ENST00000562083 BEND3Q5T5X7 828 aa16.28■□□□□ 0.2
CCP110-205ENST00000562083 VGLL2Q8N8G2 317 aa16.28■□□□□ 0.2
CCP110-205ENST00000562083 PROCA1Q8NCQ7 364 aaPredicted RBP16.28■□□□□ 0.2
CCP110-205ENST00000562083 ATXN2LQ8WWM7 1075 aaKnown RBP16.28■□□□□ 0.2
CCP110-205ENST00000562083 TRIM43Q96BQ3 446 aaPredicted RBP16.28■□□□□ 0.2
CCP110-205ENST00000562083 KAZALD1Q96I82 304 aa16.28■□□□□ 0.2
CCP110-205ENST00000562083 SPINK5Q9NQ38 1064 aaPredicted RBP16.28■□□□□ 0.2
CCP110-205ENST00000562083 MUC6Q6W4X9 2439 aa16.28■□□□□ 0.2
CCP110-205ENST00000562083 ATAD5Q96QE3 1844 aa16.27■□□□□ 0.2
CCP110-205ENST00000562083 ITGB8P26012 769 aa16.27■□□□□ 0.2
CCP110-205ENST00000562083 WDR43Q15061 677 aaKnown RBP eCLIP16.27■□□□□ 0.2
CCP110-205ENST00000562083 CHMP4AQ9BY43 222 aa16.27■□□□□ 0.2
CCP110-205ENST00000562083 PORCNQ9H237 461 aa16.27■□□□□ 0.2
CCP110-205ENST00000562083 DDX4Q9NQI0 724 aaKnown RBP16.27■□□□□ 0.2
CCP110-205ENST00000562083 RFX7Q2KHR2 1363 aa16.26■□□□□ 0.19
CCP110-205ENST00000562083 MROH5Q6ZUA9 1318 aa16.26■□□□□ 0.19
CCP110-205ENST00000562083 MYH2Q9UKX2 1941 aa16.26■□□□□ 0.19
CCP110-205ENST00000562083 RRP1BQ14684 758 aaKnown RBP16.26■□□□□ 0.19
CCP110-205ENST00000562083 Q3C1V9 767 aa16.26■□□□□ 0.19
CCP110-205ENST00000562083 ZSCAN29Q8IWY8 852 aaPredicted RBP16.26■□□□□ 0.19
CCP110-205ENST00000562083 SOCS4Q8WXH5 440 aa16.26■□□□□ 0.19
CCP110-205ENST00000562083 P2RX7Q99572 595 aaKnown RBP16.26■□□□□ 0.19
CCP110-205ENST00000562083 PDLIM7Q9NR12 457 aa16.26■□□□□ 0.19
CCP110-205ENST00000562083 FLRT1Q9NZU1 646 aa16.26■□□□□ 0.19
CCP110-205ENST00000562083 THEGQ9P2T0 379 aa16.26■□□□□ 0.19
CCP110-205ENST00000562083 GRM8O00222 908 aa16.25■□□□□ 0.19
CCP110-205ENST00000562083 DNAJB2P25686 324 aa16.25■□□□□ 0.19
CCP110-205ENST00000562083 TWISTNBQ3B726 338 aaPredicted RBP16.25■□□□□ 0.19
CCP110-205ENST00000562083 METTL24Q5JXM2 366 aa16.25■□□□□ 0.19
CCP110-205ENST00000562083 MORN1Q5T089 497 aa16.25■□□□□ 0.19
CCP110-205ENST00000562083 GJC2Q5T442 439 aaPredicted RBP16.25■□□□□ 0.19
CCP110-205ENST00000562083 SUCLG2Q96I99 432 aa16.25■□□□□ 0.19
CCP110-205ENST00000562083 LRFN3Q9BTN0 628 aa16.25■□□□□ 0.19
CCP110-205ENST00000562083 ZNF576Q9H609 170 aa16.25■□□□□ 0.19
CCP110-205ENST00000562083 ENTPD3O75355 529 aa16.24■□□□□ 0.19
CCP110-205ENST00000562083 PDE8BO95263 885 aa16.24■□□□□ 0.19
CCP110-205ENST00000562083 CALD1Q05682 793 aaKnown RBP16.24■□□□□ 0.19
CCP110-205ENST00000562083 CCDC85BQ15834 202 aaPredicted RBP16.24■□□□□ 0.19
CCP110-205ENST00000562083 TRIM60Q495X7 471 aa16.24■□□□□ 0.19
CCP110-205ENST00000562083 SLC39A5Q6ZMH5 540 aa16.24■□□□□ 0.19
CCP110-205ENST00000562083 ZNF280CQ8ND82 737 aa16.24■□□□□ 0.19
CCP110-205ENST00000562083 TRPV1Q8NER1 839 aa16.24■□□□□ 0.19
CCP110-205ENST00000562083 RNPC3Q96LT9 517 aaKnown RBP16.24■□□□□ 0.19
CCP110-205ENST00000562083 IDI2Q9BXS1 227 aa16.24■□□□□ 0.19
CCP110-205ENST00000562083 WDFY4Q6ZS81 3184 aa16.23■□□□□ 0.19
CCP110-205ENST00000562083 DNM1LO00429 736 aa16.23■□□□□ 0.19
CCP110-205ENST00000562083 MRPS5P82675 430 aaKnown RBP16.23■□□□□ 0.19
CCP110-205ENST00000562083 GPR142Q7Z601 462 aa16.23■□□□□ 0.19
CCP110-205ENST00000562083 TRMT44Q8IYL2 757 aaKnown RBP16.23■□□□□ 0.19
CCP110-205ENST00000562083 KLHDC4Q8TBB5 520 aa16.23■□□□□ 0.19
CCP110-205ENST00000562083 WDR66Q8TBY9 1149 aa16.23■□□□□ 0.19
CCP110-205ENST00000562083 EPHX3Q9H6B9 360 aa16.23■□□□□ 0.19
CCP110-205ENST00000562083 RBPJLQ9UBG7 517 aa16.23■□□□□ 0.19
CCP110-205ENST00000562083 DDX20Q9UHI6 824 aaKnown RBP16.23■□□□□ 0.19
CCP110-205ENST00000562083 NDUFB9Q9Y6M9 179 aa16.23■□□□□ 0.19
CCP110-205ENST00000562083 PLXNA1Q9UIW2 1896 aa16.22■□□□□ 0.19
CCP110-205ENST00000562083 CACNA1FO60840 1977 aa16.22■□□□□ 0.19
CCP110-205ENST00000562083 FGFR2P21802 821 aa16.22■□□□□ 0.19
CCP110-205ENST00000562083 RGS2P41220 211 aa16.22■□□□□ 0.19
CCP110-205ENST00000562083 PICALMQ13492 652 aa16.22■□□□□ 0.19
CCP110-205ENST00000562083 ADGRE1Q14246 886 aa16.22■□□□□ 0.19
CCP110-205ENST00000562083 RALBP1Q15311 655 aa16.22■□□□□ 0.19
CCP110-205ENST00000562083 ALYREFQ86V81 257 aaKnown RBP16.22■□□□□ 0.19
CCP110-205ENST00000562083 GPRC5AQ8NFJ5 357 aa16.22■□□□□ 0.19
CCP110-205ENST00000562083 LPAR1Q92633 364 aa16.22■□□□□ 0.19
CCP110-205ENST00000562083 APBA2Q99767 749 aa16.22■□□□□ 0.19
CCP110-205ENST00000562083 C1QTNF1Q9BXJ1 281 aa16.22■□□□□ 0.19
CCP110-205ENST00000562083 PRDM12Q9H4Q4 367 aa16.22■□□□□ 0.19
CCP110-205ENST00000562083 CNGA1P29973 690 aa16.21■□□□□ 0.19
CCP110-205ENST00000562083 ZEB1P37275 1124 aaPredicted RBP16.21■□□□□ 0.19
CCP110-205ENST00000562083 HERVK_113P62684 666 aa16.21■□□□□ 0.19
CCP110-205ENST00000562083 PABPC4Q13310 644 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCP110-205ENST00000562083 SH3D19Q5HYK7 790 aa16.21■□□□□ 0.19
CCP110-205ENST00000562083 ANO1Q5XXA6 986 aa16.21■□□□□ 0.19
CCP110-205ENST00000562083 LDHBP07195 334 aaKnown RBP16.2■□□□□ 0.18
CCP110-205ENST00000562083 IRX3P78415 501 aaPredicted RBP16.2■□□□□ 0.18
CCP110-205ENST00000562083 SNX17Q15036 470 aa16.2■□□□□ 0.18
CCP110-205ENST00000562083 PLEKHH3Q7Z736 793 aa16.2■□□□□ 0.18
CCP110-205ENST00000562083 TIFAQ96CG3 184 aa16.2■□□□□ 0.18
CCP110-205ENST00000562083 SNX27Q96L92 541 aa16.2■□□□□ 0.18
CCP110-205ENST00000562083 ARIH1Q9Y4X5 557 aaPredicted RBP16.2■□□□□ 0.18
CCP110-205ENST00000562083 GRXCR1A8MXD5 290 aa16.19■□□□□ 0.18
CCP110-205ENST00000562083 MAPK4P31152 587 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms