RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 IGSF3O75054 1194 aa11.38□□□□□ -0.59
SMG1-205ENST00000561947 SLC51AQ86UW1 340 aa11.38□□□□□ -0.59
SMG1-205ENST00000561947 TRIM22Q8IYM9 498 aa11.38□□□□□ -0.59
SMG1-205ENST00000561947 RPGRQ92834 1020 aaKnown RBP11.38□□□□□ -0.59
SMG1-205ENST00000561947 USP17L12C9JPN9 530 aa11.38□□□□□ -0.59
SMG1-205ENST00000561947 USP17L21D6R901 530 aa11.38□□□□□ -0.59
SMG1-205ENST00000561947 U2AF2P26368 475 aaKnown RBP eCLIP11.38□□□□□ -0.592e-6■■■■□ 21.1
SMG1-205ENST00000561947 ST5P78524 1137 aa11.38□□□□□ -0.59
SMG1-205ENST00000561947 GNL2Q13823 731 aaKnown RBP11.38□□□□□ -0.59
SMG1-205ENST00000561947 CRY2Q49AN0 593 aa11.38□□□□□ -0.59
SMG1-205ENST00000561947 NBPF11Q86T75 865 aa11.38□□□□□ -0.59
SMG1-205ENST00000561947 DZIP1Q86YF9 867 aaKnown RBP11.38□□□□□ -0.59
SMG1-205ENST00000561947 FMR1NBQ8N0W7 255 aaPredicted RBP11.38□□□□□ -0.59
SMG1-205ENST00000561947 FANCBQ8NB91 859 aa11.38□□□□□ -0.59
SMG1-205ENST00000561947 ZSCAN10Q96SZ4 725 aaPredicted RBP11.38□□□□□ -0.59
SMG1-205ENST00000561947 CBX8Q9HC52 389 aa11.38□□□□□ -0.59
SMG1-205ENST00000561947 ATP8A2Q9NTI2 1148 aa11.38□□□□□ -0.59
SMG1-205ENST00000561947 JAG2Q9Y219 1238 aa11.38□□□□□ -0.59
SMG1-205ENST00000561947 UBE2Q2LH0YL09 131 aa11.37□□□□□ -0.59
SMG1-205ENST00000561947 AP5Z1O43299 807 aa11.37□□□□□ -0.59
SMG1-205ENST00000561947 SERPINB2P05120 415 aa11.37□□□□□ -0.59
SMG1-205ENST00000561947 C15orf52Q6ZUT6 534 aaKnown RBP11.37□□□□□ -0.59
SMG1-205ENST00000561947 ENAHQ8N8S7 591 aaPredicted RBP11.37□□□□□ -0.59
SMG1-205ENST00000561947 TDRD7Q8NHU6 1098 aaKnown RBP11.37□□□□□ -0.59
SMG1-205ENST00000561947 WDR66Q8TBY9 1149 aa11.37□□□□□ -0.59
SMG1-205ENST00000561947 NUP133Q8WUM0 1156 aa11.37□□□□□ -0.59
SMG1-205ENST00000561947 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMG1-205ENST00000561947 DCP1AQ9NPI6 582 aaPredicted RBP11.37□□□□□ -0.59
SMG1-205ENST00000561947 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMG1-205ENST00000561947 ORC4O43929 436 aa11.37□□□□□ -0.59
SMG1-205ENST00000561947 DEXIO95424 95 aa11.37□□□□□ -0.59
SMG1-205ENST00000561947 CAVIN2O95810 425 aa11.37□□□□□ -0.59
SMG1-205ENST00000561947 SLC39A14Q15043 492 aa11.37□□□□□ -0.59
SMG1-205ENST00000561947 PPP2R5BQ15173 497 aa11.37□□□□□ -0.59
SMG1-205ENST00000561947 KRT27Q7Z3Y8 459 aa11.37□□□□□ -0.59
SMG1-205ENST00000561947 ZNF804AQ7Z570 1209 aa11.37□□□□□ -0.59
SMG1-205ENST00000561947 LUZP1Q86V48 1076 aa11.37□□□□□ -0.59
SMG1-205ENST00000561947 CRACR2BQ8N4Y2 399 aaPredicted RBP11.37□□□□□ -0.59
SMG1-205ENST00000561947 ARPP21Q9UBL0 812 aaPredicted RBP11.37□□□□□ -0.59
SMG1-205ENST00000561947 A0A1B0GVL5 298 aa11.36□□□□□ -0.59
SMG1-205ENST00000561947 GUCY1A2P33402 732 aa11.36□□□□□ -0.59
SMG1-205ENST00000561947 SBK1Q52WX2 424 aa11.36□□□□□ -0.59
SMG1-205ENST00000561947 IQCA1Q86XH1 822 aa11.36□□□□□ -0.59
SMG1-205ENST00000561947 PRDM1O75626 825 aa11.36□□□□□ -0.59
SMG1-205ENST00000561947 MMP1P03956 469 aa11.36□□□□□ -0.59
SMG1-205ENST00000561947 LDHBP07195 334 aaKnown RBP11.36□□□□□ -0.59
SMG1-205ENST00000561947 NDUFA8P51970 172 aa11.36□□□□□ -0.59
SMG1-205ENST00000561947 GPSM2P81274 684 aa11.36□□□□□ -0.59
SMG1-205ENST00000561947 PLCB2Q00722 1185 aa11.36□□□□□ -0.59
SMG1-205ENST00000561947 STX1AQ16623 288 aa11.36□□□□□ -0.59
SMG1-205ENST00000561947 AXDND1Q5T1B0 1012 aaPredicted RBP11.36□□□□□ -0.59
SMG1-205ENST00000561947 IFIT1BQ5T764 474 aaKnown RBP11.36□□□□□ -0.59
SMG1-205ENST00000561947 RBM17Q96I25 401 aaKnown RBP11.36□□□□□ -0.59
SMG1-205ENST00000561947 DNAJC25Q9H1X3 360 aa11.36□□□□□ -0.59
SMG1-205ENST00000561947 TAOK2Q9UL54 1235 aa11.36□□□□□ -0.59
SMG1-205ENST00000561947 NAV1Q8NEY1 1877 aa11.35□□□□□ -0.59
SMG1-205ENST00000561947 ZNF500O60304 480 aaPredicted RBP11.35□□□□□ -0.59
SMG1-205ENST00000561947 PPP6R2O75170 966 aa11.35□□□□□ -0.59
SMG1-205ENST00000561947 TRIM37O94972 964 aa11.35□□□□□ -0.59
SMG1-205ENST00000561947 SLC3A2P08195 630 aaKnown RBP11.35□□□□□ -0.59
SMG1-205ENST00000561947 ZNF165P49910 485 aa11.35□□□□□ -0.59
SMG1-205ENST00000561947 PTPAQ15257 358 aa11.35□□□□□ -0.59
SMG1-205ENST00000561947 MAP3K14Q99558 947 aa11.35□□□□□ -0.59
SMG1-205ENST00000561947 ATP2B4P23634 1241 aa11.35□□□□□ -0.59
SMG1-205ENST00000561947 CMA1P23946 247 aa11.35□□□□□ -0.59
SMG1-205ENST00000561947 EVX2Q03828 476 aa11.35□□□□□ -0.59
SMG1-205ENST00000561947 SAFBQ15424 915 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMG1-205ENST00000561947 CATIPQ7Z7H3 387 aa11.35□□□□□ -0.59
SMG1-205ENST00000561947 CMTR1Q8N1G2 835 aaKnown RBP11.35□□□□□ -0.59
SMG1-205ENST00000561947 RNF26Q9BY78 433 aaPredicted RBP11.35□□□□□ -0.59
SMG1-205ENST00000561947 LRRC37AA6NMS7 1700 aa11.35□□□□□ -0.59
SMG1-205ENST00000561947 WDHD1O75717 1129 aaPredicted RBP11.34□□□□□ -0.59
SMG1-205ENST00000561947 CALM1P0DP23 149 aa11.34□□□□□ -0.59
SMG1-205ENST00000561947 CALM2P0DP24 149 aa11.34□□□□□ -0.59
SMG1-205ENST00000561947 CALM3P0DP25 149 aa11.34□□□□□ -0.59
SMG1-205ENST00000561947 CYP2D6P10635 497 aa11.34□□□□□ -0.59
SMG1-205ENST00000561947 GSTO1P78417 241 aa11.34□□□□□ -0.59
SMG1-205ENST00000561947 DDR1Q08345 913 aa11.34□□□□□ -0.59
SMG1-205ENST00000561947 NOSTRINQ8IVI9 506 aa11.34□□□□□ -0.59
SMG1-205ENST00000561947 CCDC82Q8N4S0 544 aa11.34□□□□□ -0.59
SMG1-205ENST00000561947 JMYQ8N9B5 988 aa11.34□□□□□ -0.59
SMG1-205ENST00000561947 GPR101Q96P66 508 aaPredicted RBP11.34□□□□□ -0.59
SMG1-205ENST00000561947 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMG1-205ENST00000561947 TULP1O00294 542 aaPredicted RBP11.34□□□□□ -0.59
SMG1-205ENST00000561947 DDAH1O94760 285 aa11.34□□□□□ -0.59
SMG1-205ENST00000561947 UFL1O94874 794 aa11.34□□□□□ -0.59
SMG1-205ENST00000561947 MARCKSP29966 332 aaPredicted RBP11.34□□□□□ -0.59
SMG1-205ENST00000561947 DIS3L2Q8IYB7 885 aaKnown RBP11.34□□□□□ -0.59
SMG1-205ENST00000561947 FOXP1Q9H334 677 aaPredicted RBP11.34□□□□□ -0.59
SMG1-205ENST00000561947 RBM28Q9NW13 759 aaKnown RBP11.34□□□□□ -0.59
SMG1-205ENST00000561947 KCNJ14Q9UNX9 436 aa11.34□□□□□ -0.59
SMG1-205ENST00000561947 MROH7-TTC4A0A0A0MT08 1334 aa11.34□□□□□ -0.59
SMG1-205ENST00000561947 CDK5RAP2Q96SN8 1893 aa11.34□□□□□ -0.59
SMG1-205ENST00000561947 BTBD18B2RXH4 712 aa11.33□□□□□ -0.59
SMG1-205ENST00000561947 POLRMTO00411 1230 aaKnown RBP11.33□□□□□ -0.59
SMG1-205ENST00000561947 BBOX1O75936 387 aa11.33□□□□□ -0.59
SMG1-205ENST00000561947 PFKFB1P16118 471 aa11.33□□□□□ -0.59
SMG1-205ENST00000561947 HOXA10P31260 410 aaPredicted RBP11.33□□□□□ -0.59
SMG1-205ENST00000561947 PDE4BQ07343 736 aa11.33□□□□□ -0.59
SMG1-205ENST00000561947 C11orf57Q6ZUT1 292 aaPredicted RBP11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms