RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	ACBD3	Q9H3P7	528 aa		6.11	□□□□□ -1.43
LRRC28-222	ENST00000561431	OSGEP	Q9NPF4	335 aa		6.11	□□□□□ -1.43
LRRC28-222	ENST00000561431	DDX41	Q9UJV9	622 aa	Known RBP	6.11	□□□□□ -1.43
LRRC28-222	ENST00000561431	TLR6	Q9Y2C9	796 aa		6.11	□□□□□ -1.43
LRRC28-222	ENST00000561431	GRIN2B	Q13224	1484 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	MAGI1	Q96QZ7	1491 aa	Predicted RBP	6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	ADAM11	O75078	769 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	BMP3	P12645	472 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	MAOB	P27338	520 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	EIF4A3	P38919	411 aa	Known RBP	6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	DUOXA2	Q1HG44	320 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	NAALADL2	Q58DX5	795 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	MAP1S	Q66K74	1059 aa	Predicted RBP	6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	NFXL1	Q6ZNB6	911 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	ERMP1	Q7Z2K6	904 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	VPS37D	Q86XT2	251 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	KIAA0825	Q8IV33	1275 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	UBASH3B	Q8TF42	649 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	MIR1-1HG	Q9H1L0	117 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	KCNF1	Q9H3M0	494 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	SOX17	Q9H6I2	414 aa	Predicted RBP	6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	PIM2	Q9P1W9	311 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	CYP8B1	Q9UNU6	501 aa		6.1	□□□□□ -1.43
LRRC28-222	ENST00000561431	GAPVD1	Q14C86	1478 aa		6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	DDX3Y	O15523	660 aa	Known RBP	6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	PF4	P02776	101 aa		6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	HMGB1	P09429	215 aa	Known RBP	6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	PREP	P48147	710 aa		6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	RPS26	P62854	115 aa	Known RBP	6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	MSMP	Q1L6U9	139 aa		6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	PHC3	Q8NDX5	983 aa		6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	ASIC4	Q96FT7	647 aa		6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	RAD18	Q9NS91	495 aa		6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	PPP1R1B	Q9UD71	204 aa	Predicted RBP	6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	ANGEL1	Q9UNK9	670 aa	Known RBP	6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	RIMBP3C	A6NJZ7	1639 aa		6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	RIMBP3B	A6NNM3	1639 aa		6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	RIMBP3	Q9UFD9	1639 aa		6.09	□□□□□ -1.43
LRRC28-222	ENST00000561431	CLASP1	Q7Z460	1538 aa		6.09	□□□□□ -1.44
LRRC28-222	ENST00000561431	BPNT1	O95861	308 aa		6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	GSTP1	P09211	210 aa	Known RBP	6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	ITGB5	P18084	799 aa		6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	RACK1	P63244	317 aa	Known RBP	6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	RAD51AP2	Q09MP3	1159 aa		6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	CAMK2G	Q13555	558 aa	Predicted RBP	6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	AGMO	Q6ZNB7	445 aa		6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	GOLM1	Q8NBJ4	401 aa		6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	ZNF296	Q8WUU4	475 aa	Predicted RBP	6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	MFSD14A	Q96MC6	490 aa		6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	USP35	Q9P2H5	1018 aa		6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	CCDC39	Q9UFE4	941 aa		6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	SUPT16H	Q9Y5B9	1047 aa	Known RBP	6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	ADAMTS12	P58397	1594 aa		6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	SYNJ2	O15056	1496 aa		6.08	□□□□□ -1.44
LRRC28-222	ENST00000561431	BMP6	P22004	513 aa		6.07	□□□□□ -1.44
LRRC28-222	ENST00000561431	TNNI2	P48788	182 aa		6.07	□□□□□ -1.44
LRRC28-222	ENST00000561431	LMNB2	Q03252	620 aa		6.07	□□□□□ -1.44
LRRC28-222	ENST00000561431	PAK2	Q13177	524 aa		6.07	□□□□□ -1.44
LRRC28-222	ENST00000561431	GRIN3A	Q8TCU5	1115 aa		6.07	□□□□□ -1.44
LRRC28-222	ENST00000561431	STK35	Q8TDR2	534 aa		6.07	□□□□□ -1.44
LRRC28-222	ENST00000561431	PICK1	Q9NRD5	415 aa		6.07	□□□□□ -1.44
LRRC28-222	ENST00000561431	PCDHB5	Q9Y5E4	795 aa		6.07	□□□□□ -1.44
LRRC28-222	ENST00000561431	ARHGEF11	O15085	1522 aa		6.07	□□□□□ -1.44
LRRC28-222	ENST00000561431	SART1	O43290	800 aa	Known RBP	6.06	□□□□□ -1.44
LRRC28-222	ENST00000561431	PRNP	P04156	253 aa		6.06	□□□□□ -1.44
LRRC28-222	ENST00000561431	TFE3	P19532	575 aa	Predicted RBP	6.06	□□□□□ -1.44
LRRC28-222	ENST00000561431	DNAJA1	P31689	397 aa	Known RBP	6.06	□□□□□ -1.44
LRRC28-222	ENST00000561431	APOBR	Q0VD83	1088 aa		6.06	□□□□□ -1.44
LRRC28-222	ENST00000561431	SEPT6	Q14141	434 aa		6.06	□□□□□ -1.44
LRRC28-222	ENST00000561431	ANKRD34A	Q69YU3	496 aa		6.06	□□□□□ -1.44
LRRC28-222	ENST00000561431	C8orf37	Q96NL8	207 aa		6.06	□□□□□ -1.44
LRRC28-222	ENST00000561431	ADAMTS1	Q9UHI8	967 aa		6.06	□□□□□ -1.44
LRRC28-222	ENST00000561431	HIF3A	Q9Y2N7	669 aa		6.06	□□□□□ -1.44
LRRC28-222	ENST00000561431	ERICH3	Q5RHP9	1530 aa		6.05	□□□□□ -1.44
LRRC28-222	ENST00000561431	TLR3	O15455	904 aa	Known RBP	6.05	□□□□□ -1.44
LRRC28-222	ENST00000561431	SLFN14	P0C7P3	912 aa		6.05	□□□□□ -1.44
LRRC28-222	ENST00000561431	FOSL1	P15407	271 aa		6.05	□□□□□ -1.44
LRRC28-222	ENST00000561431	JUNB	P17275	347 aa	Predicted RBP	6.05	□□□□□ -1.44
LRRC28-222	ENST00000561431	MCM4	P33991	863 aa		6.05	□□□□□ -1.44
LRRC28-222	ENST00000561431	FBXL19	Q6PCT2	694 aa		6.05	□□□□□ -1.44
LRRC28-222	ENST00000561431	GPRASP2	Q96D09	838 aa		6.05	□□□□□ -1.44
LRRC28-222	ENST00000561431	FBXL18	Q96ME1	805 aa		6.05	□□□□□ -1.44
LRRC28-222	ENST00000561431	PCDHA4	Q9UN74	947 aa		6.05	□□□□□ -1.44
LRRC28-222	ENST00000561431	GRIN2A	Q12879	1464 aa		6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	LOC100289279	A0A1B0GTE1	492 aa		6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	TRIM37	O94972	964 aa		6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	ECEL1	O95672	775 aa		6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	F13B	P05160	661 aa		6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	LIG1	P18858	919 aa		6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	ARID5A	Q03989	594 aa		6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	SF3A1	Q15459	793 aa	Known RBP	6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	CWF19L2	Q2TBE0	894 aa	Known RBP	6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	RASIP1	Q5U651	963 aa		6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	NUTM2G	Q5VZR2	741 aa		6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	BNC2	Q6ZN30	1099 aa	Predicted RBP	6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	VSIG10L	Q86VR7	867 aa		6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	GPBAR1	Q8TDU6	330 aa		6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	CPLX3	Q8WVH0	158 aa		6.04	□□□□□ -1.44
LRRC28-222	ENST00000561431	NKD1	Q969G9	470 aa		6.04	□□□□□ -1.44

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