RNA–Protein interactions for RNA: ENST00000561252.1

SEMA4B-219, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 504 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-219ENST00000561252 AKAP2Q9Y2D5 859 aa15.35■□□□□ 0.05
SEMA4B-219ENST00000561252 CCDC84Q86UT8 332 aaPredicted RBP15.34■□□□□ 0.05
SEMA4B-219ENST00000561252 ANKLE1Q8NAG6 615 aa15.34■□□□□ 0.05
SEMA4B-219ENST00000561252 CDCA7LQ96GN5 454 aa15.34■□□□□ 0.05
SEMA4B-219ENST00000561252 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.34■□□□□ 0.05
SEMA4B-219ENST00000561252 LDHCP07864 332 aa15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 GSTO1P78417 241 aa15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 TFCP2Q12800 502 aa15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 SPP2Q13103 211 aa15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 PABPC4Q13310 644 aaKnown RBP eCLIP15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 MTX1Q13505 466 aa15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 SH3D19Q5HYK7 790 aa15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 NECAB2Q7Z6G3 386 aa15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 ZNF280CQ8ND82 737 aa15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 NSUN4Q96CB9 384 aaKnown RBP15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 PAWRQ96IZ0 340 aaKnown RBP15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 MEIS3Q99687 375 aa15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 GJD2Q9UKL4 321 aa15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 LOC285556D6RIA3 1793 aa15.33■□□□□ 0.04
SEMA4B-219ENST00000561252 BMP8BP34820 402 aa15.32■□□□□ 0.04
SEMA4B-219ENST00000561252 CAP2P40123 477 aa15.32■□□□□ 0.04
SEMA4B-219ENST00000561252 HMG20BQ9P0W2 317 aa15.32■□□□□ 0.04
SEMA4B-219ENST00000561252 STAP2Q9UGK3 403 aa15.32■□□□□ 0.04
SEMA4B-219ENST00000561252 DOCK3Q8IZD9 2030 aa15.32■□□□□ 0.04
SEMA4B-219ENST00000561252 FAM196BA6NMK8 535 aa15.31■□□□□ 0.04
SEMA4B-219ENST00000561252 USP17L5A8MUK1 530 aa15.31■□□□□ 0.04
SEMA4B-219ENST00000561252 HMGCRP04035 888 aa15.31■□□□□ 0.04
SEMA4B-219ENST00000561252 SPATA5Q8NB90 893 aa15.31■□□□□ 0.04
SEMA4B-219ENST00000561252 GDF15Q99988 308 aa15.31■□□□□ 0.04
SEMA4B-219ENST00000561252 MORF4L1Q9UBU8 362 aa15.31■□□□□ 0.04
SEMA4B-219ENST00000561252 HERC5Q9UII4 1024 aaKnown RBP15.31■□□□□ 0.04
SEMA4B-219ENST00000561252 TAOK2Q9UL54 1235 aa15.31■□□□□ 0.04
SEMA4B-219ENST00000561252 RPTORQ8N122 1335 aa15.31■□□□□ 0.04
SEMA4B-219ENST00000561252 SOX1O00570 391 aaPredicted RBP15.3■□□□□ 0.04
SEMA4B-219ENST00000561252 SRGAP3O43295 1099 aa15.3■□□□□ 0.04
SEMA4B-219ENST00000561252 GNAI3P08754 354 aa15.3■□□□□ 0.04
SEMA4B-219ENST00000561252 HMGCS2P54868 508 aa15.3■□□□□ 0.04
SEMA4B-219ENST00000561252 RRP1BQ14684 758 aaKnown RBP15.3■□□□□ 0.04
SEMA4B-219ENST00000561252 DIS3LQ8TF46 1054 aaKnown RBP15.3■□□□□ 0.04
SEMA4B-219ENST00000561252 ARHGAP45Q92619 1136 aa15.3■□□□□ 0.04
SEMA4B-219ENST00000561252 ALPK3Q96L96 1907 aa15.3■□□□□ 0.04
SEMA4B-219ENST00000561252 NEUROD6Q96NK8 337 aa15.3■□□□□ 0.04
SEMA4B-219ENST00000561252 WDR18Q9BV38 432 aa15.3■□□□□ 0.04
SEMA4B-219ENST00000561252 ASCC2Q9H1I8 757 aaPredicted RBP15.3■□□□□ 0.04
SEMA4B-219ENST00000561252 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.3■□□□□ 0.04
SEMA4B-219ENST00000561252 ARID4AP29374 1257 aaPredicted RBP15.29■□□□□ 0.04
SEMA4B-219ENST00000561252 MNX1P50219 401 aaPredicted RBP15.29■□□□□ 0.04
SEMA4B-219ENST00000561252 GPR153Q6NV75 609 aa15.29■□□□□ 0.04
SEMA4B-219ENST00000561252 TBC1D9Q6ZT07 1266 aa15.29■□□□□ 0.04
SEMA4B-219ENST00000561252 AS3MTQ9HBK9 375 aa15.29■□□□□ 0.04
SEMA4B-219ENST00000561252 HMX1Q9NP08 348 aaPredicted RBP15.29■□□□□ 0.04
SEMA4B-219ENST00000561252 ATAD5Q96QE3 1844 aa15.29■□□□□ 0.04
SEMA4B-219ENST00000561252 HOXA7P31268 230 aaPredicted RBP15.28■□□□□ 0.04
SEMA4B-219ENST00000561252 MAP3K21Q5TCX8 1036 aa15.28■□□□□ 0.04
SEMA4B-219ENST00000561252 PI16Q6UXB8 463 aa15.28■□□□□ 0.04
SEMA4B-219ENST00000561252 TEX11Q8IYF3 940 aa15.28■□□□□ 0.04
SEMA4B-219ENST00000561252 SLC17A8Q8NDX2 589 aa15.28■□□□□ 0.04
SEMA4B-219ENST00000561252 LRCH3Q96II8 777 aa15.28■□□□□ 0.04
SEMA4B-219ENST00000561252 NBPF3Q9H094 633 aa15.28■□□□□ 0.04
SEMA4B-219ENST00000561252 DHX36Q9H2U1 1008 aaKnown RBP15.28■□□□□ 0.04
SEMA4B-219ENST00000561252 RAI14Q9P0K7 980 aa15.28■□□□□ 0.04
SEMA4B-219ENST00000561252 PI4KBQ9UBF8 816 aa15.28■□□□□ 0.04
SEMA4B-219ENST00000561252 PLXNB2O15031 1838 aa15.28■□□□□ 0.04
SEMA4B-219ENST00000561252 XRCC5P13010 732 aaKnown RBP15.27■□□□□ 0.04
SEMA4B-219ENST00000561252 RARSP54136 660 aaKnown RBP15.27■□□□□ 0.04
SEMA4B-219ENST00000561252 BACE1P56817 501 aa15.27■□□□□ 0.04
SEMA4B-219ENST00000561252 TRIM32Q13049 653 aa15.27■□□□□ 0.04
SEMA4B-219ENST00000561252 GORABQ5T7V8 394 aa15.27■□□□□ 0.04
SEMA4B-219ENST00000561252 METTL16Q86W50 562 aaKnown RBP15.27■□□□□ 0.04
SEMA4B-219ENST00000561252 OGDHLQ9ULD0 1010 aa15.27■□□□□ 0.04
SEMA4B-219ENST00000561252 ASNSP08243 561 aa15.26■□□□□ 0.03
SEMA4B-219ENST00000561252 UQCRFS1P1P0C7P4 283 aa15.26■□□□□ 0.03
SEMA4B-219ENST00000561252 MCAMP43121 646 aa15.26■□□□□ 0.03
SEMA4B-219ENST00000561252 PPP4CP60510 307 aa15.26■□□□□ 0.03
SEMA4B-219ENST00000561252 FOXP4Q8IVH2 680 aaPredicted RBP15.26■□□□□ 0.03
SEMA4B-219ENST00000561252 C7orf61Q8IZ16 206 aa15.26■□□□□ 0.03
SEMA4B-219ENST00000561252 SH3RF3Q8TEJ3 882 aaPredicted RBP15.26■□□□□ 0.03
SEMA4B-219ENST00000561252 TRIB2Q92519 343 aa15.26■□□□□ 0.03
SEMA4B-219ENST00000561252 P2RX7Q99572 595 aaKnown RBP15.26■□□□□ 0.03
SEMA4B-219ENST00000561252 C11orf49Q9H6J7 331 aa15.26■□□□□ 0.03
SEMA4B-219ENST00000561252 GINM1Q9NU53 330 aa15.26■□□□□ 0.03
SEMA4B-219ENST00000561252 LRP2BPQ9P2M1 347 aa15.26■□□□□ 0.03
SEMA4B-219ENST00000561252 DNAH12Q6ZR08 3092 aa15.25■□□□□ 0.03
SEMA4B-219ENST00000561252 C19orf81C9J6K1 198 aa15.25■□□□□ 0.03
SEMA4B-219ENST00000561252 DLL1O00548 723 aa15.25■□□□□ 0.03
SEMA4B-219ENST00000561252 IGSF3O75054 1194 aa15.25■□□□□ 0.03
SEMA4B-219ENST00000561252 BAG3O95817 575 aa15.25■□□□□ 0.03
SEMA4B-219ENST00000561252 IRX3P78415 501 aaPredicted RBP15.25■□□□□ 0.03
SEMA4B-219ENST00000561252 TRMT44Q8IYL2 757 aaKnown RBP15.25■□□□□ 0.03
SEMA4B-219ENST00000561252 GPRC5AQ8NFJ5 357 aa15.25■□□□□ 0.03
SEMA4B-219ENST00000561252 TMOD4Q9NZQ9 345 aa15.25■□□□□ 0.03
SEMA4B-219ENST00000561252 SIPA1L1O43166 1804 aa15.24■□□□□ 0.03
SEMA4B-219ENST00000561252 DDX60LQ5H9U9 1706 aaKnown RBP15.24■□□□□ 0.03
SEMA4B-219ENST00000561252 PLCG2P16885 1265 aa15.24■□□□□ 0.03
SEMA4B-219ENST00000561252 HERVK_113P62684 666 aa15.24■□□□□ 0.03
SEMA4B-219ENST00000561252 JAG1P78504 1218 aa15.24■□□□□ 0.03
SEMA4B-219ENST00000561252 G3BP1Q13283 466 aaKnown RBP eCLIP15.24■□□□□ 0.03
SEMA4B-219ENST00000561252 MTMR2Q13614 643 aa15.24■□□□□ 0.03
SEMA4B-219ENST00000561252 LRIT3Q3SXY7 679 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms