RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 CLEC4GQ6UXB4 293 aa16■□□□□ 0.15
RABGGTA-220ENST00000560998 CCDC73Q6ZRK6 1079 aa16■□□□□ 0.15
RABGGTA-220ENST00000560998 AIDAQ96BJ3 306 aa16■□□□□ 0.15
RABGGTA-220ENST00000560998 LCMT1Q9UIC8 334 aa16■□□□□ 0.15
RABGGTA-220ENST00000560998 KINO60870 393 aaKnown RBP16■□□□□ 0.15
RABGGTA-220ENST00000560998 PPFIA3O75145 1194 aa16■□□□□ 0.15
RABGGTA-220ENST00000560998 SASH3O75995 380 aa16■□□□□ 0.15
RABGGTA-220ENST00000560998 TRDNQ13061 729 aa16■□□□□ 0.15
RABGGTA-220ENST00000560998 MAGEB6Q8N7X4 407 aa16■□□□□ 0.15
RABGGTA-220ENST00000560998 ADAM21Q9UKJ8 722 aa16■□□□□ 0.15
RABGGTA-220ENST00000560998 ZMYM6O95789 1325 aa16■□□□□ 0.15
RABGGTA-220ENST00000560998 C4AP0C0L4 1744 aa15.99■□□□□ 0.15
RABGGTA-220ENST00000560998 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
RABGGTA-220ENST00000560998 A0A1B0GUL6 1792 aa15.99■□□□□ 0.15
RABGGTA-220ENST00000560998 CASZ1Q86V15 1759 aa15.99■□□□□ 0.15
RABGGTA-220ENST00000560998 BCL9LQ86UU0 1499 aa15.99■□□□□ 0.15
RABGGTA-220ENST00000560998 SMC2O95347 1197 aa15.99■□□□□ 0.15
RABGGTA-220ENST00000560998 BCAMP50895 628 aa15.99■□□□□ 0.15
RABGGTA-220ENST00000560998 CHRNDQ07001 517 aa15.99■□□□□ 0.15
RABGGTA-220ENST00000560998 ARMCX5Q6P1M9 558 aa15.99■□□□□ 0.15
RABGGTA-220ENST00000560998 RCOR1Q9UKL0 485 aa15.99■□□□□ 0.15
RABGGTA-220ENST00000560998 DENND2AQ9ULE3 1009 aa15.99■□□□□ 0.15
RABGGTA-220ENST00000560998 JRKLQ9Y4A0 524 aa15.99■□□□□ 0.15
RABGGTA-220ENST00000560998 GOLGA6L9A6NEM1 432 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 PATL2C9JE40 543 aaKnown RBP15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 SEC31AO94979 1220 aaKnown RBP15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 LMAN1P49257 510 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 GUCY1B3Q02153 619 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 CYB5R4Q7L1T6 521 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 ILDR1Q86SU0 546 aaPredicted RBP15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 AOPEPQ8N6M6 819 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 NKX2-3Q8TAU0 364 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 PPM1EQ8WY54 764 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 RABGGTAQ92696 567 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 ZNF396Q96N95 335 aaPredicted RBP15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 MKRN1Q9UHC7 482 aaKnown RBP15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 CHD4Q14839 1912 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 ZSCAN12O43309 604 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 MBD4O95243 580 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 BRD3Q15059 726 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 VPS72Q15906 364 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 ERFEQ4G0M1 354 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 CDC5LQ99459 802 aaKnown RBP15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 EPB41L4AQ9HCS5 686 aaPredicted RBP15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 PARP3Q9Y6F1 533 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 SCN7AQ01118 1682 aa15.98■□□□□ 0.15
RABGGTA-220ENST00000560998 CCDC151A5D8V7 595 aa15.97■□□□□ 0.15
RABGGTA-220ENST00000560998 SH2B2O14492 632 aaPredicted RBP15.97■□□□□ 0.15
RABGGTA-220ENST00000560998 FAM160A1Q05DH4 1040 aa15.97■□□□□ 0.15
RABGGTA-220ENST00000560998 TRIM65Q6PJ69 517 aa15.97■□□□□ 0.15
RABGGTA-220ENST00000560998 TMC6Q7Z403 805 aa15.97■□□□□ 0.15
RABGGTA-220ENST00000560998 CCAR1Q8IX12 1150 aaKnown RBP15.97■□□□□ 0.15
RABGGTA-220ENST00000560998 CARD6Q9BX69 1037 aa15.97■□□□□ 0.15
RABGGTA-220ENST00000560998 FUT8Q9BYC5 575 aa15.97■□□□□ 0.15
RABGGTA-220ENST00000560998 ANGEL1Q9UNK9 670 aaKnown RBP15.97■□□□□ 0.15
RABGGTA-220ENST00000560998 CNTNAP4Q9C0A0 1308 aa15.97■□□□□ 0.15
RABGGTA-220ENST00000560998 TIAM2Q8IVF5 1701 aa15.97■□□□□ 0.15
RABGGTA-220ENST00000560998 URI1O94763 535 aaPredicted RBP15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 CEBPZQ03701 1054 aaKnown RBP15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 C3orf67Q6ZVT6 689 aa15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 RSRC2Q7L4I2 434 aaKnown RBP15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 RAB11FIP4Q86YS3 637 aa15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 SUGP1Q8IWZ8 645 aaKnown RBP15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 IFNL3Q8IZI9 196 aa15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 USP28Q96RU2 1077 aa15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 FTOQ9C0B1 505 aaKnown RBP eCLIP15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 ARMT1Q9H993 441 aa15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 NEDD4P46934 1319 aa15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 B4E1Z4 1266 aa15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 RGL2O15211 777 aa15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 SF3B3Q15393 1217 aaKnown RBP15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 C8orf76Q96K31 380 aa15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 DEF6Q9H4E7 631 aa15.96■□□□□ 0.15
RABGGTA-220ENST00000560998 TAF1P21675 1872 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 PNPLA7Q6ZV29 1317 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 MAP2K7O14733 419 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 CPLX1O14810 134 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 CLGNO14967 610 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 CPP00450 1065 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 ATP2B1P20020 1258 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 KCNQ4P56696 695 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 ANKRD18AQ8IVF6 992 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 ENGASEQ8NFI3 743 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 HNRNPLLQ8WVV9 542 aaKnown RBP15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 SECISBP2LQ93073 1101 aaKnown RBP15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 TMEM87BQ96K49 555 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 C8orf37Q96NL8 207 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 NAPBQ9H115 298 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 ZCCHC17Q9NP64 241 aaKnown RBP15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 ZNF804BA4D1E1 1349 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 GSG1L2A8MUP6 293 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 POTEB2H3BUK9 544 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 EIF3JO75822 258 aaKnown RBP15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 PSEN1P49768 467 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 TUBB4BP68371 445 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 GOLGA1Q92805 767 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 NGLY1Q96IV0 654 aa15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 XPO4Q9C0E2 1151 aaKnown RBP15.95■□□□□ 0.14
RABGGTA-220ENST00000560998 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.94■□□□□ 0.14
RABGGTA-220ENST00000560998 GNAT2P19087 354 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms