RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 MYH13Q9UKX3 1938 aa12.05□□□□□ -0.48
HERC1-210ENST00000560897 MROH5Q6ZUA9 1318 aa12.05□□□□□ -0.48
HERC1-210ENST00000560897 MYO9BQ13459 2157 aa12.05□□□□□ -0.48
HERC1-210ENST00000560897 PHIPQ8WWQ0 1821 aa12.04□□□□□ -0.48
HERC1-210ENST00000560897 PIEZO1Q92508 2521 aa12.04□□□□□ -0.48
HERC1-210ENST00000560897 DNM1LO00429 736 aa12.04□□□□□ -0.48
HERC1-210ENST00000560897 DNAJB2P25686 324 aa12.04□□□□□ -0.48
HERC1-210ENST00000560897 IRX3P78415 501 aaPredicted RBP12.04□□□□□ -0.48
HERC1-210ENST00000560897 MFSD14CQ5VZR4 134 aa12.04□□□□□ -0.48
HERC1-210ENST00000560897 APBA2Q99767 749 aa12.04□□□□□ -0.48
HERC1-210ENST00000560897 USP40Q9NVE5 1235 aa12.04□□□□□ -0.48
HERC1-210ENST00000560897 DAGLAQ9Y4D2 1042 aa12.04□□□□□ -0.48
HERC1-210ENST00000560897 LOC285556D6RIA3 1793 aa12.03□□□□□ -0.48
HERC1-210ENST00000560897 SLC4A2P04920 1241 aa12.03□□□□□ -0.48
HERC1-210ENST00000560897 CNGA1P29973 690 aa12.03□□□□□ -0.48
HERC1-210ENST00000560897 MAPK4P31152 587 aa12.03□□□□□ -0.48
HERC1-210ENST00000560897 WDR66Q8TBY9 1149 aa12.03□□□□□ -0.48
HERC1-210ENST00000560897 SNX27Q96L92 541 aa12.03□□□□□ -0.48
HERC1-210ENST00000560897 TBC1D2Q9BYX2 928 aa12.03□□□□□ -0.48
HERC1-210ENST00000560897 ASCC2Q9H1I8 757 aaPredicted RBP12.03□□□□□ -0.48
HERC1-210ENST00000560897 ZNF576Q9H609 170 aa12.03□□□□□ -0.48
HERC1-210ENST00000560897 MORF4L1Q9UBU8 362 aa12.03□□□□□ -0.48
HERC1-210ENST00000560897 FAM198AQ9UFP1 575 aa12.03□□□□□ -0.48
HERC1-210ENST00000560897 DNAH12Q6ZR08 3092 aa12.02□□□□□ -0.48
HERC1-210ENST00000560897 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.02□□□□□ -0.49
HERC1-210ENST00000560897 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.02□□□□□ -0.49
HERC1-210ENST00000560897 KBTBD13C9JR72 458 aa12.02□□□□□ -0.49
HERC1-210ENST00000560897 HMGCS2P54868 508 aa12.02□□□□□ -0.49
HERC1-210ENST00000560897 FLIIQ13045 1269 aa12.02□□□□□ -0.49
HERC1-210ENST00000560897 SPP2Q13103 211 aa12.02□□□□□ -0.49
HERC1-210ENST00000560897 METTL24Q5JXM2 366 aa12.02□□□□□ -0.49
HERC1-210ENST00000560897 AKNAD1Q5T1N1 836 aa12.02□□□□□ -0.49
HERC1-210ENST00000560897 G2E3Q7L622 706 aa12.02□□□□□ -0.49
HERC1-210ENST00000560897 CCDC84Q86UT8 332 aaPredicted RBP12.02□□□□□ -0.49
HERC1-210ENST00000560897 GPRC5AQ8NFJ5 357 aa12.02□□□□□ -0.49
HERC1-210ENST00000560897 LPAR1Q92633 364 aa12.02□□□□□ -0.49
HERC1-210ENST00000560897 TIFAQ96CG3 184 aa12.02□□□□□ -0.49
HERC1-210ENST00000560897 DDX20Q9UHI6 824 aaKnown RBP12.02□□□□□ -0.49
HERC1-210ENST00000560897 ATRNL1Q5VV63 1379 aa12.02□□□□□ -0.49
HERC1-210ENST00000560897 ENTPD3O75355 529 aa12.01□□□□□ -0.49
HERC1-210ENST00000560897 RGS3P49796 1198 aa12.01□□□□□ -0.49
HERC1-210ENST00000560897 C1QBPQ07021 282 aaKnown RBP12.01□□□□□ -0.49
HERC1-210ENST00000560897 DIXDC1Q155Q3 683 aa12.01□□□□□ -0.49
HERC1-210ENST00000560897 CCL14Q16627 93 aa12.01□□□□□ -0.49
HERC1-210ENST00000560897 TMEM31Q5JXX7 168 aa12.01□□□□□ -0.49
HERC1-210ENST00000560897 ALYREFQ86V81 257 aaKnown RBP12.01□□□□□ -0.49
HERC1-210ENST00000560897 ZFPM1Q8IX07 1006 aa12.01□□□□□ -0.49
HERC1-210ENST00000560897 TSPYL6Q8N831 410 aa12.01□□□□□ -0.49
HERC1-210ENST00000560897 ZNF280CQ8ND82 737 aa12.01□□□□□ -0.49
HERC1-210ENST00000560897 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.01□□□□□ -0.49
HERC1-210ENST00000560897 MYBBP1AQ9BQG0 1328 aaKnown RBP12.01□□□□□ -0.49
HERC1-210ENST00000560897 TCF20Q9UGU0 1960 aaKnown RBP12.01□□□□□ -0.49
HERC1-210ENST00000560897 GLRX3O76003 335 aaKnown RBP12□□□□□ -0.49
HERC1-210ENST00000560897 MYCNP04198 464 aaPredicted RBP12□□□□□ -0.49
HERC1-210ENST00000560897 IFIT1P09914 478 aaKnown RBP12□□□□□ -0.49
HERC1-210ENST00000560897 TRIM60Q495X7 471 aa12□□□□□ -0.49
HERC1-210ENST00000560897 POTEEQ6S8J3 1075 aa12□□□□□ -0.49
HERC1-210ENST00000560897 GPR142Q7Z601 462 aa12□□□□□ -0.49
HERC1-210ENST00000560897 PLEKHH3Q7Z736 793 aa12□□□□□ -0.49
HERC1-210ENST00000560897 ARRDC4Q8NCT1 418 aa12□□□□□ -0.49
HERC1-210ENST00000560897 LRFN3Q9BTN0 628 aa12□□□□□ -0.49
HERC1-210ENST00000560897 PUS3Q9BZE2 481 aaKnown RBP12□□□□□ -0.49
HERC1-210ENST00000560897 AS3MTQ9HBK9 375 aa12□□□□□ -0.49
HERC1-210ENST00000560897 PDLIM7Q9NR12 457 aa12□□□□□ -0.49
HERC1-210ENST00000560897 C9orf78Q9NZ63 289 aaPredicted RBP12□□□□□ -0.49
HERC1-210ENST00000560897 TMOD4Q9NZQ9 345 aa12□□□□□ -0.49
HERC1-210ENST00000560897 RLFQ13129 1914 aa11.99□□□□□ -0.49
HERC1-210ENST00000560897 BDP1A6H8Y1 2624 aa11.99□□□□□ -0.49
HERC1-210ENST00000560897 LDHBP07195 334 aaKnown RBP11.99□□□□□ -0.49
HERC1-210ENST00000560897 IGFBP4P22692 258 aa11.99□□□□□ -0.49
HERC1-210ENST00000560897 RALBP1Q15311 655 aa11.99□□□□□ -0.49
HERC1-210ENST00000560897 CCDC85BQ15834 202 aaPredicted RBP11.99□□□□□ -0.49
HERC1-210ENST00000560897 AAK1Q2M2I8 961 aa11.99□□□□□ -0.49
HERC1-210ENST00000560897 EPHA10Q5JZY3 1008 aa11.99□□□□□ -0.49
HERC1-210ENST00000560897 SLC39A5Q6ZMH5 540 aa11.99□□□□□ -0.49
HERC1-210ENST00000560897 CCDC129Q6ZRS4 1044 aa11.99□□□□□ -0.49
HERC1-210ENST00000560897 GTF3C2Q8WUA4 911 aaPredicted RBP11.99□□□□□ -0.49
HERC1-210ENST00000560897 NECAB3Q96P71 396 aaPredicted RBP11.99□□□□□ -0.49
HERC1-210ENST00000560897 MUC6Q6W4X9 2439 aa11.99□□□□□ -0.49
HERC1-210ENST00000560897 UTYO14607 1347 aa11.98□□□□□ -0.49
HERC1-210ENST00000560897 GRM8O00222 908 aa11.98□□□□□ -0.49
HERC1-210ENST00000560897 PICALMQ13492 652 aa11.98□□□□□ -0.49
HERC1-210ENST00000560897 TWISTNBQ3B726 338 aaPredicted RBP11.98□□□□□ -0.49
HERC1-210ENST00000560897 GJC2Q5T442 439 aaPredicted RBP11.98□□□□□ -0.49
HERC1-210ENST00000560897 IDI2Q9BXS1 227 aa11.98□□□□□ -0.49
HERC1-210ENST00000560897 OSBPL5Q9H0X9 879 aaPredicted RBP11.98□□□□□ -0.49
HERC1-210ENST00000560897 PRDM12Q9H4Q4 367 aa11.98□□□□□ -0.49
HERC1-210ENST00000560897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.98□□□□□ -0.49
HERC1-210ENST00000560897 CACNA1FO60840 1977 aa11.98□□□□□ -0.49
HERC1-210ENST00000560897 ATAD5Q96QE3 1844 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 KIF16BQ96L93 1317 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 USP17L5A8MUK1 530 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 PDE8BO95263 885 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 RAG1P15918 1043 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 PRDX5P30044 214 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 HERVK_113P62684 666 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 ERVK-9P63128 1117 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 ERVK-24P63145 666 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 ATP2B2Q01814 1243 aa11.97□□□□□ -0.49
HERC1-210ENST00000560897 MAP3K10Q02779 954 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms