RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 ACBD3Q9H3P7 528 aa8.27□□□□□ -1.09
HMG20A-211ENST00000560867 CAPN10Q9HC96 672 aa8.27□□□□□ -1.09
HMG20A-211ENST00000560867 PICK1Q9NRD5 415 aa8.27□□□□□ -1.09
HMG20A-211ENST00000560867 FAM105AQ9NUU6 356 aa8.27□□□□□ -1.09
HMG20A-211ENST00000560867 MSTNO14793 375 aa8.26□□□□□ -1.09
HMG20A-211ENST00000560867 SOX9P48436 509 aa8.26□□□□□ -1.09
HMG20A-211ENST00000560867 TTLL4Q14679 1199 aa8.26□□□□□ -1.09
HMG20A-211ENST00000560867 TMEM201Q5SNT2 666 aa8.26□□□□□ -1.09
HMG20A-211ENST00000560867 SMYD4Q8IYR2 804 aaPredicted RBP8.26□□□□□ -1.09
HMG20A-211ENST00000560867 EHMT1Q9H9B1 1298 aa8.26□□□□□ -1.09
HMG20A-211ENST00000560867 UBP1Q9NZI7 540 aa8.26□□□□□ -1.09
HMG20A-211ENST00000560867 PCOLCE2Q9UKZ9 415 aa8.26□□□□□ -1.09
HMG20A-211ENST00000560867 GSC2O15499 205 aa8.25□□□□□ -1.09
HMG20A-211ENST00000560867 BMP3P12645 472 aa8.25□□□□□ -1.09
HMG20A-211ENST00000560867 MAP4P27816 1152 aaKnown RBP8.25□□□□□ -1.09
HMG20A-211ENST00000560867 NTF4P34130 210 aa8.25□□□□□ -1.09
HMG20A-211ENST00000560867 CRKP46108 304 aa8.25□□□□□ -1.09
HMG20A-211ENST00000560867 TP53INP1Q96A56 240 aa8.25□□□□□ -1.09
HMG20A-211ENST00000560867 GMLQ99445 158 aa8.25□□□□□ -1.09
HMG20A-211ENST00000560867 FAM83CQ9BQN1 747 aa8.25□□□□□ -1.09
HMG20A-211ENST00000560867 RAXQ9Y2V3 346 aa8.25□□□□□ -1.09
HMG20A-211ENST00000560867 PRAMEF27A3QJZ7 478 aa8.24□□□□□ -1.09
HMG20A-211ENST00000560867 PROCP04070 461 aa8.24□□□□□ -1.09
HMG20A-211ENST00000560867 ETF1P62495 437 aaKnown RBP8.24□□□□□ -1.09
HMG20A-211ENST00000560867 LRRFIP1Q32MZ4 808 aaKnown RBP8.24□□□□□ -1.09
HMG20A-211ENST00000560867 PPM1JQ5JR12 505 aa8.24□□□□□ -1.09
HMG20A-211ENST00000560867 PAOXQ6QHF9 649 aa8.24□□□□□ -1.09
HMG20A-211ENST00000560867 PRR23CQ6ZRP0 262 aa8.24□□□□□ -1.09
HMG20A-211ENST00000560867 CDC37L1Q7L3B6 337 aa8.24□□□□□ -1.09
HMG20A-211ENST00000560867 C12orf40Q86WS4 652 aa8.24□□□□□ -1.09
HMG20A-211ENST00000560867 HID1Q8IV36 788 aa8.24□□□□□ -1.09
HMG20A-211ENST00000560867 SPOCK3Q9BQ16 436 aa8.24□□□□□ -1.09
HMG20A-211ENST00000560867 FAM95CA0A1B0GW59 222 aa8.23□□□□□ -1.09
HMG20A-211ENST00000560867 NEFMP07197 916 aa8.23□□□□□ -1.09
HMG20A-211ENST00000560867 SEZ6Q53EL9 994 aa8.23□□□□□ -1.09
HMG20A-211ENST00000560867 SGO2Q562F6 1265 aa8.23□□□□□ -1.09
HMG20A-211ENST00000560867 SLC6A19Q695T7 634 aa8.23□□□□□ -1.09
HMG20A-211ENST00000560867 CDPF1Q6NVV7 123 aa8.23□□□□□ -1.09
HMG20A-211ENST00000560867 MRPL41Q8IXM3 137 aaKnown RBP8.23□□□□□ -1.09
HMG20A-211ENST00000560867 GIMAP7Q8NHV1 300 aa8.23□□□□□ -1.09
HMG20A-211ENST00000560867 FBXO27Q8NI29 283 aa8.23□□□□□ -1.09
HMG20A-211ENST00000560867 ISL2Q96A47 359 aa8.23□□□□□ -1.09
HMG20A-211ENST00000560867 SEMA6CQ9H3T2 930 aa8.23□□□□□ -1.09
HMG20A-211ENST00000560867 TPSG1Q9NRR2 321 aa8.23□□□□□ -1.09
HMG20A-211ENST00000560867 POLR3KQ9Y2Y1 108 aaPredicted RBP8.23□□□□□ -1.09
HMG20A-211ENST00000560867 LRIG2O94898 1065 aa8.22□□□□□ -1.09
HMG20A-211ENST00000560867 HTR3BO95264 441 aa8.22□□□□□ -1.09
HMG20A-211ENST00000560867 PGRP06401 933 aa8.22□□□□□ -1.09
HMG20A-211ENST00000560867 HCLS1P14317 486 aaPredicted RBP8.22□□□□□ -1.09
HMG20A-211ENST00000560867 GRK4P32298 578 aa8.22□□□□□ -1.09
HMG20A-211ENST00000560867 CPSF6Q16630 551 aaKnown RBP eCLIP8.22□□□□□ -1.09
HMG20A-211ENST00000560867 NAALADL2Q58DX5 795 aa8.22□□□□□ -1.09
HMG20A-211ENST00000560867 BEND4Q6ZU67 534 aa8.22□□□□□ -1.09
HMG20A-211ENST00000560867 OR6P1Q8NGX9 317 aa8.22□□□□□ -1.09
HMG20A-211ENST00000560867 BRMS1Q9HCU9 246 aa8.22□□□□□ -1.09
HMG20A-211ENST00000560867 STOML1Q9UBI4 398 aa8.22□□□□□ -1.09
HMG20A-211ENST00000560867 ZNRF3Q9ULT6 936 aa8.22□□□□□ -1.09
HMG20A-211ENST00000560867 MEIS3P2A8K0S8 358 aa8.21□□□□□ -1.1
HMG20A-211ENST00000560867 TLR3O15455 904 aaKnown RBP8.21□□□□□ -1.1
HMG20A-211ENST00000560867 ATF4P18848 351 aaPredicted RBP8.21□□□□□ -1.1
HMG20A-211ENST00000560867 PLCG1P19174 1290 aa8.21□□□□□ -1.1
HMG20A-211ENST00000560867 RAB6AP20340 208 aa8.21□□□□□ -1.1
HMG20A-211ENST00000560867 RXRBP28702 533 aa8.21□□□□□ -1.1
HMG20A-211ENST00000560867 YARSP54577 528 aaKnown RBP8.21□□□□□ -1.1
HMG20A-211ENST00000560867 ARID5AQ03989 594 aa8.21□□□□□ -1.1
HMG20A-211ENST00000560867 SF3A1Q15459 793 aaKnown RBP8.21□□□□□ -1.1
HMG20A-211ENST00000560867 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.21□□□□□ -1.1
HMG20A-211ENST00000560867 MFSD2AQ8NA29 543 aa8.21□□□□□ -1.1
HMG20A-211ENST00000560867 RBBP8NLQ8NC74 664 aaPredicted RBP8.21□□□□□ -1.1
HMG20A-211ENST00000560867 FBLIM1Q8WUP2 373 aa8.21□□□□□ -1.1
HMG20A-211ENST00000560867 KCNF1Q9H3M0 494 aa8.21□□□□□ -1.1
HMG20A-211ENST00000560867 RNGTTO60942 597 aaKnown RBP8.2□□□□□ -1.1
HMG20A-211ENST00000560867 CDK8P49336 464 aa8.2□□□□□ -1.1
HMG20A-211ENST00000560867 SEZ6L2Q6UXD5 910 aa8.2□□□□□ -1.1
HMG20A-211ENST00000560867 MCATQ8IVS2 390 aaKnown RBP8.2□□□□□ -1.1
HMG20A-211ENST00000560867 SLFN12Q8IYM2 578 aa8.2□□□□□ -1.1
HMG20A-211ENST00000560867 SSU72Q9NP77 194 aaKnown RBP8.2□□□□□ -1.1
HMG20A-211ENST00000560867 GMIPQ9P107 970 aa8.2□□□□□ -1.1
HMG20A-211ENST00000560867 PCDHB14Q9Y5E9 798 aa8.2□□□□□ -1.1
HMG20A-211ENST00000560867 CSADQ9Y600 493 aa8.2□□□□□ -1.1
HMG20A-211ENST00000560867 CST3P01034 146 aaPredicted RBP8.19□□□□□ -1.1
HMG20A-211ENST00000560867 MCM4P33991 863 aa8.19□□□□□ -1.1
HMG20A-211ENST00000560867 TNNI2P48788 182 aa8.19□□□□□ -1.1
HMG20A-211ENST00000560867 NKAPLQ5M9Q1 402 aa8.19□□□□□ -1.1
HMG20A-211ENST00000560867 ARMC5Q96C12 935 aa8.19□□□□□ -1.1
HMG20A-211ENST00000560867 GINM1Q9NU53 330 aa8.19□□□□□ -1.1
HMG20A-211ENST00000560867 REV1Q9UBZ9 1251 aa8.19□□□□□ -1.1
HMG20A-211ENST00000560867 EFR3BQ9Y2G0 817 aa8.19□□□□□ -1.1
HMG20A-211ENST00000560867 DAGLAQ9Y4D2 1042 aa8.19□□□□□ -1.1
HMG20A-211ENST00000560867 NFICP08651 508 aa8.18□□□□□ -1.1
HMG20A-211ENST00000560867 CYP27A1Q02318 531 aa8.18□□□□□ -1.1
HMG20A-211ENST00000560867 RNF43Q68DV7 783 aa8.18□□□□□ -1.1
HMG20A-211ENST00000560867 GPAT2Q6NUI2 795 aa8.18□□□□□ -1.1
HMG20A-211ENST00000560867 ZNF746Q6NUN9 644 aaPredicted RBP8.18□□□□□ -1.1
HMG20A-211ENST00000560867 TAB3Q8N5C8 712 aaPredicted RBP8.18□□□□□ -1.1
HMG20A-211ENST00000560867 TMEM87BQ96K49 555 aa8.18□□□□□ -1.1
HMG20A-211ENST00000560867 COX4I2Q96KJ9 171 aa8.18□□□□□ -1.1
HMG20A-211ENST00000560867 FERD3LQ96RJ6 166 aa8.18□□□□□ -1.1
HMG20A-211ENST00000560867 FOXQ1Q9C009 403 aa8.18□□□□□ -1.1
HMG20A-211ENST00000560867 C7orf69Q9H7B7 122 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms