RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 ME1P48163 572 aa22.18■■□□□ 1.14
HMBOX1-215ENST00000560599 GNL2Q13823 731 aaKnown RBP22.18■■□□□ 1.14
HMBOX1-215ENST00000560599 ZSCAN10Q96SZ4 725 aaPredicted RBP22.18■■□□□ 1.14
HMBOX1-215ENST00000560599 ZKSCAN3Q9BRR0 538 aa22.18■■□□□ 1.14
HMBOX1-215ENST00000560599 FTOQ9C0B1 505 aaKnown RBP eCLIP22.18■■□□□ 1.14
HMBOX1-215ENST00000560599 PODXL2Q9NZ53 605 aa22.18■■□□□ 1.14
HMBOX1-215ENST00000560599 KLRG2A4D1S0 409 aaPredicted RBP22.17■■□□□ 1.14
HMBOX1-215ENST00000560599 ESPNB1AK53 854 aa22.17■■□□□ 1.14
HMBOX1-215ENST00000560599 CALM1P0DP23 149 aa22.17■■□□□ 1.14
HMBOX1-215ENST00000560599 CALM2P0DP24 149 aa22.17■■□□□ 1.14
HMBOX1-215ENST00000560599 CALM3P0DP25 149 aa22.17■■□□□ 1.14
HMBOX1-215ENST00000560599 TYRO3Q06418 890 aa22.17■■□□□ 1.14
HMBOX1-215ENST00000560599 SF3A1Q15459 793 aaKnown RBP22.17■■□□□ 1.14
HMBOX1-215ENST00000560599 MRPS27Q92552 414 aaKnown RBP22.17■■□□□ 1.14
HMBOX1-215ENST00000560599 RBM28Q9NW13 759 aaKnown RBP22.17■■□□□ 1.14
HMBOX1-215ENST00000560599 RGPD3A6NKT7 1758 aaPredicted RBP22.17■■□□□ 1.14
HMBOX1-215ENST00000560599 RGPD4Q7Z3J3 1758 aa22.17■■□□□ 1.14
HMBOX1-215ENST00000560599 KIF28PB7ZC32 967 aa22.16■■□□□ 1.14
HMBOX1-215ENST00000560599 USP17L12C9JPN9 530 aa22.16■■□□□ 1.14
HMBOX1-215ENST00000560599 USP17L21D6R901 530 aa22.16■■□□□ 1.14
HMBOX1-215ENST00000560599 DEXIO95424 95 aa22.16■■□□□ 1.14
HMBOX1-215ENST00000560599 BAG3O95817 575 aa22.16■■□□□ 1.14
HMBOX1-215ENST00000560599 FAM160A1Q05DH4 1040 aa22.16■■□□□ 1.14
HMBOX1-215ENST00000560599 SAFBQ15424 915 aaKnown RBP eCLIP22.16■■□□□ 1.14
HMBOX1-215ENST00000560599 CATIPQ7Z7H3 387 aa22.16■■□□□ 1.14
HMBOX1-215ENST00000560599 STK11IPQ8N1F8 1099 aa22.16■■□□□ 1.14
HMBOX1-215ENST00000560599 FSIP1Q8NA03 581 aa22.16■■□□□ 1.14
HMBOX1-215ENST00000560599 LINC00301Q8NCQ3 95 aa22.16■■□□□ 1.14
HMBOX1-215ENST00000560599 FLAD1Q8NFF5 587 aa22.16■■□□□ 1.14
HMBOX1-215ENST00000560599 RRAGDQ9NQL2 400 aaPredicted RBP22.16■■□□□ 1.14
HMBOX1-215ENST00000560599 KINO60870 393 aaKnown RBP22.15■■□□□ 1.14
HMBOX1-215ENST00000560599 DDAH1O94760 285 aa22.15■■□□□ 1.14
HMBOX1-215ENST00000560599 PDE4BQ07343 736 aa22.15■■□□□ 1.14
HMBOX1-215ENST00000560599 IFIT1BQ5T764 474 aaKnown RBP22.15■■□□□ 1.14
HMBOX1-215ENST00000560599 ANO1Q5XXA6 986 aa22.15■■□□□ 1.14
HMBOX1-215ENST00000560599 AMOTL1Q8IY63 956 aa22.15■■□□□ 1.14
HMBOX1-215ENST00000560599 FANCBQ8NB91 859 aa22.15■■□□□ 1.14
HMBOX1-215ENST00000560599 FAM200AQ8TCP9 573 aa22.15■■□□□ 1.14
HMBOX1-215ENST00000560599 CCDC39Q9UFE4 941 aa22.15■■□□□ 1.14
HMBOX1-215ENST00000560599 MROH7-TTC4A0A0A0MT08 1334 aa22.15■■□□□ 1.14
HMBOX1-215ENST00000560599 ROBO3Q96MS0 1386 aa22.15■■□□□ 1.14
HMBOX1-215ENST00000560599 ANKRD31Q8N7Z5 1873 aa22.15■■□□□ 1.14
HMBOX1-215ENST00000560599 CYP2D7A0A087X1C5 515 aa22.14■■□□□ 1.14
HMBOX1-215ENST00000560599 PLSCR1O15162 318 aa22.14■■□□□ 1.14
HMBOX1-215ENST00000560599 SPTLC2O15270 562 aa22.14■■□□□ 1.14
HMBOX1-215ENST00000560599 CAVIN2O95810 425 aa22.14■■□□□ 1.14
HMBOX1-215ENST00000560599 IL1R1P14778 569 aa22.14■■□□□ 1.14
HMBOX1-215ENST00000560599 PPP4CP60510 307 aa22.14■■□□□ 1.14
HMBOX1-215ENST00000560599 CAMK4Q16566 473 aa22.14■■□□□ 1.14
HMBOX1-215ENST00000560599 ADALQ6DHV7 355 aa22.14■■□□□ 1.14
HMBOX1-215ENST00000560599 SASS6Q6UVJ0 657 aa22.14■■□□□ 1.14
HMBOX1-215ENST00000560599 ENAHQ8N8S7 591 aaPredicted RBP22.14■■□□□ 1.14
HMBOX1-215ENST00000560599 AIFM3Q96NN9 605 aa22.14■■□□□ 1.14
HMBOX1-215ENST00000560599 PPEF1O14829 653 aaPredicted RBP22.14■■□□□ 1.13
HMBOX1-215ENST00000560599 POLR3DP05423 398 aaPredicted RBP22.14■■□□□ 1.13
HMBOX1-215ENST00000560599 NLGN1Q8N2Q7 840 aa22.14■■□□□ 1.13
HMBOX1-215ENST00000560599 JMYQ8N9B5 988 aa22.14■■□□□ 1.13
HMBOX1-215ENST00000560599 NUP133Q8WUM0 1156 aa22.14■■□□□ 1.13
HMBOX1-215ENST00000560599 RNF26Q9BY78 433 aaPredicted RBP22.14■■□□□ 1.13
HMBOX1-215ENST00000560599 GOLPH3LQ9H4A5 285 aa22.14■■□□□ 1.13
HMBOX1-215ENST00000560599 CD209Q9NNX6 404 aa22.14■■□□□ 1.13
HMBOX1-215ENST00000560599 CLIC4Q9Y696 253 aa22.14■■□□□ 1.13
HMBOX1-215ENST00000560599 U2AF2P26368 475 aaKnown RBP eCLIP22.13■■□□□ 1.133e-6■■■■□ 21.7
HMBOX1-215ENST00000560599 USP5P45974 858 aa22.13■■□□□ 1.13
HMBOX1-215ENST00000560599 NBPF11Q86T75 865 aa22.13■■□□□ 1.13
HMBOX1-215ENST00000560599 ZSCAN30Q86W11 494 aa22.13■■□□□ 1.13
HMBOX1-215ENST00000560599 SLF2Q8IX21 1173 aa22.13■■□□□ 1.13
HMBOX1-215ENST00000560599 CRACR2BQ8N4Y2 399 aaPredicted RBP22.13■■□□□ 1.13
HMBOX1-215ENST00000560599 TBC1D22AQ8WUA7 517 aa22.13■■□□□ 1.13
HMBOX1-215ENST00000560599 AKT1S1Q96B36 256 aa22.13■■□□□ 1.13
HMBOX1-215ENST00000560599 GJB4Q9NTQ9 266 aa22.13■■□□□ 1.13
HMBOX1-215ENST00000560599 PCDHA7Q9UN72 937 aa22.13■■□□□ 1.13
HMBOX1-215ENST00000560599 JAG2Q9Y219 1238 aa22.13■■□□□ 1.13
HMBOX1-215ENST00000560599 MRVI1Q9Y6F6 885 aa22.13■■□□□ 1.13
HMBOX1-215ENST00000560599 AKAP17AQ02040 695 aaKnown RBP22.12■■□□□ 1.13
HMBOX1-215ENST00000560599 CKAP2LQ8IYA6 745 aa22.12■■□□□ 1.13
HMBOX1-215ENST00000560599 PROM2Q8N271 834 aa22.12■■□□□ 1.13
HMBOX1-215ENST00000560599 MMP1P03956 469 aa22.11■■□□□ 1.13
HMBOX1-215ENST00000560599 PLCG2P16885 1265 aa22.11■■□□□ 1.13
HMBOX1-215ENST00000560599 CLCN1P35523 988 aa22.11■■□□□ 1.13
HMBOX1-215ENST00000560599 ZNF827Q17R98 1081 aa22.11■■□□□ 1.13
HMBOX1-215ENST00000560599 CCDC178Q5BJE1 867 aa22.11■■□□□ 1.13
HMBOX1-215ENST00000560599 SP8Q8IXZ3 490 aa22.11■■□□□ 1.13
HMBOX1-215ENST00000560599 ENGASEQ8NFI3 743 aa22.11■■□□□ 1.13
HMBOX1-215ENST00000560599 TBC1D16Q8TBP0 767 aa22.11■■□□□ 1.13
HMBOX1-215ENST00000560599 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.11■■□□□ 1.13
HMBOX1-215ENST00000560599 MCM9Q9NXL9 1143 aa22.11■■□□□ 1.13
HMBOX1-215ENST00000560599 DDX60LQ5H9U9 1706 aaKnown RBP22.11■■□□□ 1.13
HMBOX1-215ENST00000560599 TNS1Q9HBL0 1735 aaKnown RBP22.1■■□□□ 1.13
HMBOX1-215ENST00000560599 PPP6R2O75170 966 aa22.1■■□□□ 1.13
HMBOX1-215ENST00000560599 XBP1P17861 261 aa22.1■■□□□ 1.13
HMBOX1-215ENST00000560599 SLC39A14Q15043 492 aa22.1■■□□□ 1.13
HMBOX1-215ENST00000560599 GPR101Q96P66 508 aaPredicted RBP22.1■■□□□ 1.13
HMBOX1-215ENST00000560599 FAM205AQ6ZU69 1335 aa22.09■■□□□ 1.13
HMBOX1-215ENST00000560599 PRDM1O75626 825 aa22.09■■□□□ 1.13
HMBOX1-215ENST00000560599 CYP2D6P10635 497 aa22.09■■□□□ 1.13
HMBOX1-215ENST00000560599 SNW1Q13573 536 aaKnown RBP22.09■■□□□ 1.13
HMBOX1-215ENST00000560599 STX1AQ16623 288 aa22.09■■□□□ 1.13
HMBOX1-215ENST00000560599 C12orf60Q5U649 245 aa22.09■■□□□ 1.13
HMBOX1-215ENST00000560599 SLC51AQ86UW1 340 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms