RNA–Protein interactions for RNA: ENST00000560046.1

DCAF11-227, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-227ENST00000560046 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.37□□□□□ -0.43
DCAF11-227ENST00000560046 SLC12A7Q9Y666 1083 aa12.37□□□□□ -0.43
DCAF11-227ENST00000560046 C10orf71Q711Q0 1435 aa12.37□□□□□ -0.43
DCAF11-227ENST00000560046 A0A1W2PQ27 194 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 A0A1W2PQ64 194 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 A0A1W2PQD8 194 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 ESPNB1AK53 854 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 ORC4O43929 436 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 RANBP6O60518 1105 aaKnown RBP12.36□□□□□ -0.43
DCAF11-227ENST00000560046 FMNL1O95466 1100 aaPredicted RBP12.36□□□□□ -0.43
DCAF11-227ENST00000560046 CCDC192P0DO97 292 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 IARSP41252 1262 aaKnown RBP12.36□□□□□ -0.43
DCAF11-227ENST00000560046 NT5C2P49902 561 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 ST5P78524 1137 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 MLLT1Q03111 559 aaPredicted RBP12.36□□□□□ -0.43
DCAF11-227ENST00000560046 PPP2R5BQ15173 497 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 MYSM1Q5VVJ2 828 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 MSL1Q68DK7 614 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 OTUD7BQ6GQQ9 843 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 CTR9Q6PD62 1173 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 SYNE3Q6ZMZ3 975 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 RNF214Q8ND24 703 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 WDR66Q8TBY9 1149 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 BICD2Q8TD16 824 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 ESR2Q92731 530 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 RBM17Q96I25 401 aaKnown RBP12.36□□□□□ -0.43
DCAF11-227ENST00000560046 ALG1Q9BT22 464 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 CRNKL1Q9BZJ0 848 aaKnown RBP12.36□□□□□ -0.43
DCAF11-227ENST00000560046 ATP8A2Q9NTI2 1148 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 POLR3EQ9NVU0 708 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 FOCADQ5VW36 1801 aa12.36□□□□□ -0.43
DCAF11-227ENST00000560046 DDX60LQ5H9U9 1706 aaKnown RBP12.35□□□□□ -0.43
DCAF11-227ENST00000560046 ERICH2A1L162 156 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 KIF28PB7ZC32 967 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 NPHP1O15259 732 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 PPFIA3O75145 1194 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 ATP2B4P23634 1241 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 SSRP1Q08945 709 aaKnown RBP12.35□□□□□ -0.43
DCAF11-227ENST00000560046 CHAF1AQ13111 956 aaPredicted RBP12.35□□□□□ -0.43
DCAF11-227ENST00000560046 KRT40Q6A162 431 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 ZNF804AQ7Z570 1209 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 MICU3Q86XE3 530 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 COL23A1Q86Y22 540 aaPredicted RBP12.35□□□□□ -0.43
DCAF11-227ENST00000560046 LINC00301Q8NCQ3 95 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 ENGASEQ8NFI3 743 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 WASF1Q92558 559 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 CRAMP1Q96RY5 1269 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 TNMDQ9H2S6 317 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 PRDM10Q9NQV6 1147 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 PODXL2Q9NZ53 605 aa12.35□□□□□ -0.43
DCAF11-227ENST00000560046 CCDC196A0A1B0GTZ2 297 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 MINDY4BA8MYZ0 360 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 POLRMTO00411 1230 aaKnown RBP12.34□□□□□ -0.43
DCAF11-227ENST00000560046 CTAGE5O15320 804 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 NR1I2O75469 434 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 BBOX1O75936 387 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 U2AF2P26368 475 aaKnown RBP eCLIP12.34□□□□□ -0.43
DCAF11-227ENST00000560046 PRDX5P30044 214 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 CLCN1P35523 988 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 PPP4CP60510 307 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 GPSM2P81274 684 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 DDR1Q08345 913 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 RTN1Q16799 776 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 TPRNQ4KMQ1 711 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 RRP12Q5JTH9 1297 aaKnown RBP12.34□□□□□ -0.43
DCAF11-227ENST00000560046 ADALQ6DHV7 355 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 TMC4Q7Z404 712 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 NBPF11Q86T75 865 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 CCAR1Q8IX12 1150 aaKnown RBP12.34□□□□□ -0.43
DCAF11-227ENST00000560046 ZNF654Q8IZM8 581 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 SMC1BQ8NDV3 1235 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 KCNG4Q8TDN1 519 aa12.34□□□□□ -0.43
DCAF11-227ENST00000560046 RPGRQ92834 1020 aaKnown RBP12.34□□□□□ -0.43
DCAF11-227ENST00000560046 FTOQ9C0B1 505 aaKnown RBP eCLIP12.34□□□□□ -0.43
DCAF11-227ENST00000560046 DCP1AQ9NPI6 582 aaPredicted RBP12.34□□□□□ -0.43
DCAF11-227ENST00000560046 MYH1P12882 1939 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 IL1R1P14778 569 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 RXRAP19793 462 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 GSTO1P78417 241 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 CEBPZQ03701 1054 aaKnown RBP12.33□□□□□ -0.44
DCAF11-227ENST00000560046 FAM160A1Q05DH4 1040 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 TYRO3Q06418 890 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 SNW1Q13573 536 aaKnown RBP12.33□□□□□ -0.44
DCAF11-227ENST00000560046 ANO1Q5XXA6 986 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 CRACR2BQ8N4Y2 399 aaPredicted RBP12.33□□□□□ -0.44
DCAF11-227ENST00000560046 FANCBQ8NB91 859 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 PHKBQ93100 1093 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 AIFM3Q96NN9 605 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 ZSCAN10Q96SZ4 725 aaPredicted RBP12.33□□□□□ -0.44
DCAF11-227ENST00000560046 UBAC1Q9BSL1 405 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 MYL10Q9BUA6 226 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 GOLPH3LQ9H4A5 285 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
DCAF11-227ENST00000560046 TOMM22Q9NS69 142 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 ANKIB1Q9P2G1 1089 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 ARPP21Q9UBL0 812 aaPredicted RBP12.33□□□□□ -0.44
DCAF11-227ENST00000560046 PCDHA7Q9UN72 937 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 MRVI1Q9Y6F6 885 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 TNKSO95271 1327 aa12.33□□□□□ -0.44
DCAF11-227ENST00000560046 ROBO3Q96MS0 1386 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms