RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 AGTPBP1Q9UPW5 1226 aa25.25■■□□□ 1.63
PSEN1-225ENST00000560005 DOCK1Q14185 1865 aa25.24■■□□□ 1.63
PSEN1-225ENST00000560005 PHIPQ8WWQ0 1821 aa25.24■■□□□ 1.63
PSEN1-225ENST00000560005 RFX7Q2KHR2 1363 aa25.24■■□□□ 1.63
PSEN1-225ENST00000560005 SALL1Q9NSC2 1324 aa25.24■■□□□ 1.63
PSEN1-225ENST00000560005 DEFB123Q8N688 67 aa25.24■■□□□ 1.63
PSEN1-225ENST00000560005 USP44Q9H0E7 712 aa25.24■■□□□ 1.63
PSEN1-225ENST00000560005 GNL3LQ9NVN8 582 aaKnown RBP25.24■■□□□ 1.63
PSEN1-225ENST00000560005 UNC80Q8N2C7 3258 aa25.24■■□□□ 1.63
PSEN1-225ENST00000560005 DDTLA6NHG4 134 aaPredicted RBP25.23■■□□□ 1.63
PSEN1-225ENST00000560005 MAP3K10Q02779 954 aa25.23■■□□□ 1.63
PSEN1-225ENST00000560005 TREML2Q5T2D2 321 aa25.23■■□□□ 1.63
PSEN1-225ENST00000560005 Q7L0L9 218 aa25.23■■□□□ 1.63
PSEN1-225ENST00000560005 ATG9AQ7Z3C6 839 aa25.23■■□□□ 1.63
PSEN1-225ENST00000560005 TNNQ9UQP3 1299 aa25.23■■□□□ 1.63
PSEN1-225ENST00000560005 CTNND1O60716 968 aaKnown RBP25.22■■□□□ 1.63
PSEN1-225ENST00000560005 ATP2B3Q16720 1220 aa25.22■■□□□ 1.63
PSEN1-225ENST00000560005 FAM110CQ1W6H9 321 aa25.22■■□□□ 1.63
PSEN1-225ENST00000560005 GPR153Q6NV75 609 aa25.22■■□□□ 1.63
PSEN1-225ENST00000560005 ANKLE1Q8NAG6 615 aa25.22■■□□□ 1.63
PSEN1-225ENST00000560005 MYH2Q9UKX2 1941 aa25.22■■□□□ 1.63
PSEN1-225ENST00000560005 GAKO14976 1311 aa25.21■■□□□ 1.63
PSEN1-225ENST00000560005 PNMA3Q9UL41 463 aa25.21■■□□□ 1.63
PSEN1-225ENST00000560005 DENND2AQ9ULE3 1009 aa25.21■■□□□ 1.63
PSEN1-225ENST00000560005 HMGCRP04035 888 aa25.2■■□□□ 1.62
PSEN1-225ENST00000560005 SYN1P17600 705 aa25.2■■□□□ 1.62
PSEN1-225ENST00000560005 PHKA1P46020 1223 aa25.2■■□□□ 1.62
PSEN1-225ENST00000560005 PICALMQ13492 652 aa25.2■■□□□ 1.62
PSEN1-225ENST00000560005 NBPF3Q9H094 633 aa25.2■■□□□ 1.62
PSEN1-225ENST00000560005 SIL1Q9H173 461 aa25.2■■□□□ 1.62
PSEN1-225ENST00000560005 DDX4Q9NQI0 724 aaKnown RBP25.2■■□□□ 1.62
PSEN1-225ENST00000560005 SEMA3EO15041 775 aa25.19■■□□□ 1.62
PSEN1-225ENST00000560005 TRIM32Q13049 653 aa25.18■■□□□ 1.62
PSEN1-225ENST00000560005 LRIT3Q3SXY7 679 aa25.18■■□□□ 1.62
PSEN1-225ENST00000560005 CENPQQ7L2Z9 268 aaPredicted RBP25.18■■□□□ 1.62
PSEN1-225ENST00000560005 DZIP1Q86YF9 867 aaKnown RBP25.18■■□□□ 1.62
PSEN1-225ENST00000560005 HMX1Q9NP08 348 aaPredicted RBP25.18■■□□□ 1.62
PSEN1-225ENST00000560005 CEP126Q9P2H0 1117 aa25.18■■□□□ 1.62
PSEN1-225ENST00000560005 STXBP5LQ9Y2K9 1186 aa25.18■■□□□ 1.62
PSEN1-225ENST00000560005 RPTORQ8N122 1335 aa25.17■■□□□ 1.62
PSEN1-225ENST00000560005 MAGEA10P43363 369 aaPredicted RBP25.17■■□□□ 1.62
PSEN1-225ENST00000560005 ZGPATQ8N5A5 531 aaKnown RBP25.17■■□□□ 1.62
PSEN1-225ENST00000560005 DDX60LQ5H9U9 1706 aaKnown RBP25.17■■□□□ 1.62
PSEN1-225ENST00000560005 FAM196BA6NMK8 535 aa25.16■■□□□ 1.62
PSEN1-225ENST00000560005 BTDP43251 543 aa25.16■■□□□ 1.62
PSEN1-225ENST00000560005 TDHQ8IZJ6 230 aa25.16■■□□□ 1.62
PSEN1-225ENST00000560005 PROCA1Q8NCQ7 364 aaPredicted RBP25.16■■□□□ 1.62
PSEN1-225ENST00000560005 RWDD1Q9H446 243 aaPredicted RBP25.16■■□□□ 1.62
PSEN1-225ENST00000560005 C11orf49Q9H6J7 331 aa25.16■■□□□ 1.62
PSEN1-225ENST00000560005 ZBTB40Q9NUA8 1239 aa25.16■■□□□ 1.62
PSEN1-225ENST00000560005 GJD2Q9UKL4 321 aa25.16■■□□□ 1.62
PSEN1-225ENST00000560005 CIAO1O76071 339 aa25.15■■□□□ 1.62
PSEN1-225ENST00000560005 GCLCP48506 637 aaPredicted RBP25.15■■□□□ 1.62
PSEN1-225ENST00000560005 SPP2Q13103 211 aa25.15■■□□□ 1.62
PSEN1-225ENST00000560005 MTMR10Q9NXD2 777 aa25.15■■□□□ 1.62
PSEN1-225ENST00000560005 ABCF2Q9UG63 623 aa25.15■■□□□ 1.62
PSEN1-225ENST00000560005 ADORA1P30542 326 aa25.14■■□□□ 1.62
PSEN1-225ENST00000560005 CCDC102BQ68D86 513 aa25.14■■□□□ 1.62
PSEN1-225ENST00000560005 SLF2Q8IX21 1173 aa25.14■■□□□ 1.62
PSEN1-225ENST00000560005 FBXO3Q9UK99 471 aa25.14■■□□□ 1.62
PSEN1-225ENST00000560005 LOC285556D6RIA3 1793 aa25.13■■□□□ 1.61
PSEN1-225ENST00000560005 HMGCS2P54868 508 aa25.13■■□□□ 1.61
PSEN1-225ENST00000560005 FAM163AQ96GL9 167 aaPredicted RBP25.13■■□□□ 1.61
PSEN1-225ENST00000560005 UBE2OQ9C0C9 1292 aaKnown RBP25.13■■□□□ 1.61
PSEN1-225ENST00000560005 MROH7-TTC4A0A0A0MT08 1334 aa25.12■■□□□ 1.61
PSEN1-225ENST00000560005 TBC1D12O60347 775 aa25.12■■□□□ 1.61
PSEN1-225ENST00000560005 PABPC4Q13310 644 aaKnown RBP eCLIP25.12■■□□□ 1.61
PSEN1-225ENST00000560005 RASGRF1Q13972 1273 aa25.12■■□□□ 1.61
PSEN1-225ENST00000560005 ZNF280CQ8ND82 737 aa25.12■■□□□ 1.61
PSEN1-225ENST00000560005 TRIB2Q92519 343 aa25.12■■□□□ 1.61
PSEN1-225ENST00000560005 ASCC2Q9H1I8 757 aaPredicted RBP25.12■■□□□ 1.61
PSEN1-225ENST00000560005 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.12■■□□□ 1.61
PSEN1-225ENST00000560005 OGDHLQ9ULD0 1010 aa25.12■■□□□ 1.61
PSEN1-225ENST00000560005 OSBPL5Q9H0X9 879 aaPredicted RBP25.11■■□□□ 1.61
PSEN1-225ENST00000560005 PFASO15067 1338 aa25.11■■□□□ 1.61
PSEN1-225ENST00000560005 LAMA2P24043 3122 aaKnown RBP25.1■■□□□ 1.61
PSEN1-225ENST00000560005 ZBTB22O15209 634 aa25.1■■□□□ 1.61
PSEN1-225ENST00000560005 CYP2B6P20813 491 aa25.1■■□□□ 1.61
PSEN1-225ENST00000560005 IL15P40933 162 aaPredicted RBP25.1■■□□□ 1.61
PSEN1-225ENST00000560005 RHBDL3P58872 404 aa25.1■■□□□ 1.61
PSEN1-225ENST00000560005 PLXNB2O15031 1838 aa25.09■■□□□ 1.61
PSEN1-225ENST00000560005 PRKAR2AP13861 404 aaKnown RBP25.09■■□□□ 1.61
PSEN1-225ENST00000560005 SPTY2D1Q68D10 685 aaPredicted RBP25.09■■□□□ 1.61
PSEN1-225ENST00000560005 PA2G4Q9UQ80 394 aaKnown RBP25.09■■□□□ 1.61
PSEN1-225ENST00000560005 ATAD5Q96QE3 1844 aa25.08■■□□□ 1.61
PSEN1-225ENST00000560005 GPR75-ASB3A0A0A6YYF3 556 aa25.08■■□□□ 1.61
PSEN1-225ENST00000560005 MAP3K21Q5TCX8 1036 aa25.08■■□□□ 1.61
PSEN1-225ENST00000560005 HDAC5Q9UQL6 1122 aa25.08■■□□□ 1.61
PSEN1-225ENST00000560005 PDS5AQ29RF7 1337 aaKnown RBP25.08■■□□□ 1.6
PSEN1-225ENST00000560005 GNAI3P08754 354 aa25.07■■□□□ 1.6
PSEN1-225ENST00000560005 UBTFL1P0CB47 393 aaPredicted RBP25.07■■□□□ 1.6
PSEN1-225ENST00000560005 TIMM10P62072 90 aa25.07■■□□□ 1.6
PSEN1-225ENST00000560005 MECOMQ03112 1051 aa25.07■■□□□ 1.6
PSEN1-225ENST00000560005 HDAC1Q13547 482 aaPredicted RBP25.07■■□□□ 1.6
PSEN1-225ENST00000560005 RRP1BQ14684 758 aaKnown RBP25.07■■□□□ 1.6
PSEN1-225ENST00000560005 COL25A1Q9BXS0 654 aaPredicted RBP25.07■■□□□ 1.6
PSEN1-225ENST00000560005 TBC1D2Q9BYX2 928 aa25.07■■□□□ 1.6
PSEN1-225ENST00000560005 MORF4L1Q9UBU8 362 aa25.07■■□□□ 1.6
PSEN1-225ENST00000560005 PCDHB15Q9Y5E8 787 aa25.07■■□□□ 1.6
PSEN1-225ENST00000560005 VCANP13611 3396 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms