RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 UNC80Q8N2C7 3258 aa13.74□□□□□ -0.21
HERC1-204ENST00000559715 TRIM75PA6NK02 468 aa13.73□□□□□ -0.21
HERC1-204ENST00000559715 ADCY3O60266 1144 aa13.73□□□□□ -0.21
HERC1-204ENST00000559715 SGPL1O95470 568 aa13.73□□□□□ -0.21
HERC1-204ENST00000559715 TRIM27P14373 513 aa13.73□□□□□ -0.21
HERC1-204ENST00000559715 MVPQ14764 893 aaKnown RBP13.73□□□□□ -0.21
HERC1-204ENST00000559715 SPTY2D1Q68D10 685 aaPredicted RBP13.73□□□□□ -0.21
HERC1-204ENST00000559715 GADL1Q6ZQY3 521 aa13.73□□□□□ -0.21
HERC1-204ENST00000559715 SPATA5Q8NB90 893 aa13.73□□□□□ -0.21
HERC1-204ENST00000559715 NKX2-3Q8TAU0 364 aa13.73□□□□□ -0.21
HERC1-204ENST00000559715 PXYLP1Q8TE99 480 aa13.73□□□□□ -0.21
HERC1-204ENST00000559715 PAK6Q9NQU5 681 aaPredicted RBP13.73□□□□□ -0.21
HERC1-204ENST00000559715 GJD2Q9UKL4 321 aa13.73□□□□□ -0.21
HERC1-204ENST00000559715 AKAP2Q9Y2D5 859 aa13.73□□□□□ -0.21
HERC1-204ENST00000559715 GNAI3P08754 354 aa13.72□□□□□ -0.21
HERC1-204ENST00000559715 POTEEQ6S8J3 1075 aa13.72□□□□□ -0.21
HERC1-204ENST00000559715 CHRDL2Q6WN34 429 aa13.72□□□□□ -0.21
HERC1-204ENST00000559715 ERICH6Q7L0X2 663 aa13.72□□□□□ -0.21
HERC1-204ENST00000559715 METTL16Q86W50 562 aaKnown RBP13.72□□□□□ -0.21
HERC1-204ENST00000559715 ZSCAN29Q8IWY8 852 aaPredicted RBP13.72□□□□□ -0.21
HERC1-204ENST00000559715 SLF2Q8IX21 1173 aa13.72□□□□□ -0.21
HERC1-204ENST00000559715 CRISPLD2Q9H0B8 497 aa13.72□□□□□ -0.21
HERC1-204ENST00000559715 OSBPL5Q9H0X9 879 aaPredicted RBP13.72□□□□□ -0.21
HERC1-204ENST00000559715 HDAC5Q9UQL6 1122 aa13.72□□□□□ -0.21
HERC1-204ENST00000559715 MAST2Q6P0Q8 1798 aa13.71□□□□□ -0.21
HERC1-204ENST00000559715 BCAR3O75815 825 aa13.71□□□□□ -0.21
HERC1-204ENST00000559715 MAP4K4O95819 1239 aaPredicted RBP13.71□□□□□ -0.21
HERC1-204ENST00000559715 INHAP05111 366 aa13.71□□□□□ -0.21
HERC1-204ENST00000559715 CAP2P40123 477 aa13.71□□□□□ -0.21
HERC1-204ENST00000559715 MNX1P50219 401 aaPredicted RBP13.71□□□□□ -0.21
HERC1-204ENST00000559715 SPP2Q13103 211 aa13.71□□□□□ -0.21
HERC1-204ENST00000559715 SHROOM1Q2M3G4 852 aaPredicted RBP13.71□□□□□ -0.21
HERC1-204ENST00000559715 SH3D19Q5HYK7 790 aa13.71□□□□□ -0.21
HERC1-204ENST00000559715 ADGRA1Q86SQ6 560 aa13.71□□□□□ -0.21
HERC1-204ENST00000559715 ANKRD13CQ8N6S4 541 aa13.71□□□□□ -0.21
HERC1-204ENST00000559715 PROCA1Q8NCQ7 364 aaPredicted RBP13.71□□□□□ -0.21
HERC1-204ENST00000559715 NEUROD6Q96NK8 337 aa13.71□□□□□ -0.21
HERC1-204ENST00000559715 DNAJC18Q9H819 358 aa13.71□□□□□ -0.21
HERC1-204ENST00000559715 ZBTB7BO15156 539 aaPredicted RBP13.7□□□□□ -0.22
HERC1-204ENST00000559715 UBXN2AP68543 259 aa13.7□□□□□ -0.22
HERC1-204ENST00000559715 POLA2Q14181 598 aa13.7□□□□□ -0.22
HERC1-204ENST00000559715 FAM110CQ1W6H9 321 aa13.7□□□□□ -0.22
HERC1-204ENST00000559715 ZNF280CQ8ND82 737 aa13.7□□□□□ -0.22
HERC1-204ENST00000559715 SH3RF3Q8TEJ3 882 aaPredicted RBP13.7□□□□□ -0.22
HERC1-204ENST00000559715 DPF3Q92784 378 aa13.7□□□□□ -0.22
HERC1-204ENST00000559715 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.22
HERC1-204ENST00000559715 EYSQ5T1H1 3165 aa13.69□□□□□ -0.22
HERC1-204ENST00000559715 TNPO2O14787 897 aaKnown RBP13.69□□□□□ -0.22
HERC1-204ENST00000559715 PEX10O60683 326 aa13.69□□□□□ -0.22
HERC1-204ENST00000559715 FARP2O94887 1054 aaPredicted RBP13.69□□□□□ -0.22
HERC1-204ENST00000559715 HMGCS2P54868 508 aa13.69□□□□□ -0.22
HERC1-204ENST00000559715 PPP4CP60510 307 aa13.69□□□□□ -0.22
HERC1-204ENST00000559715 DEFB118Q96PH6 123 aa13.69□□□□□ -0.22
HERC1-204ENST00000559715 ASCC2Q9H1I8 757 aaPredicted RBP13.69□□□□□ -0.22
HERC1-204ENST00000559715 BIN2Q9UBW5 565 aaPredicted RBP13.69□□□□□ -0.22
HERC1-204ENST00000559715 GNAI2P04899 355 aa13.68□□□□□ -0.22
HERC1-204ENST00000559715 CYP2E1P05181 493 aaPredicted RBP13.68□□□□□ -0.22
HERC1-204ENST00000559715 LDHCP07864 332 aa13.68□□□□□ -0.22
HERC1-204ENST00000559715 TRIM32Q13049 653 aa13.68□□□□□ -0.22
HERC1-204ENST00000559715 ATF7IPQ6VMQ6 1270 aa13.68□□□□□ -0.22
HERC1-204ENST00000559715 SMCR8Q8TEV9 937 aaPredicted RBP13.68□□□□□ -0.22
HERC1-204ENST00000559715 WDR18Q9BV38 432 aa13.68□□□□□ -0.22
HERC1-204ENST00000559715 MORF4L1Q9UBU8 362 aa13.68□□□□□ -0.22
HERC1-204ENST00000559715 MYH1P12882 1939 aa13.68□□□□□ -0.22
HERC1-204ENST00000559715 GSTO1P78417 241 aa13.67□□□□□ -0.22
HERC1-204ENST00000559715 SSH3Q8TE77 659 aa13.67□□□□□ -0.22
HERC1-204ENST00000559715 DIS3LQ8TF46 1054 aaKnown RBP13.67□□□□□ -0.22
HERC1-204ENST00000559715 DBNDD2Q9BQY9 259 aa13.67□□□□□ -0.22
HERC1-204ENST00000559715 HTATIP2Q9BUP3 242 aa13.67□□□□□ -0.22
HERC1-204ENST00000559715 TXNRD2Q9NNW7 524 aa13.67□□□□□ -0.22
HERC1-204ENST00000559715 GPR108Q9NPR9 543 aa13.67□□□□□ -0.22
HERC1-204ENST00000559715 SNRKQ9NRH2 765 aa13.67□□□□□ -0.22
HERC1-204ENST00000559715 FOXD4L1Q9NU39 408 aa13.67□□□□□ -0.22
HERC1-204ENST00000559715 HERC5Q9UII4 1024 aaKnown RBP13.67□□□□□ -0.22
HERC1-204ENST00000559715 DDX60LQ5H9U9 1706 aaKnown RBP13.67□□□□□ -0.22
HERC1-204ENST00000559715 USP17L5A8MUK1 530 aa13.66□□□□□ -0.22
HERC1-204ENST00000559715 CCER2I3L3R5 266 aa13.66□□□□□ -0.22
HERC1-204ENST00000559715 SOX1O00570 391 aaPredicted RBP13.66□□□□□ -0.22
HERC1-204ENST00000559715 HOXA7P31268 230 aaPredicted RBP13.66□□□□□ -0.22
HERC1-204ENST00000559715 GCLCP48506 637 aaPredicted RBP13.66□□□□□ -0.22
HERC1-204ENST00000559715 TNNI3KQ59H18 835 aa13.66□□□□□ -0.22
HERC1-204ENST00000559715 MAP3K21Q5TCX8 1036 aa13.66□□□□□ -0.22
HERC1-204ENST00000559715 TEX11Q8IYF3 940 aa13.66□□□□□ -0.22
HERC1-204ENST00000559715 TMEM57Q8N5G2 664 aa13.66□□□□□ -0.22
HERC1-204ENST00000559715 CLUAP1Q96AJ1 413 aa13.66□□□□□ -0.22
HERC1-204ENST00000559715 PAWRQ96IZ0 340 aaKnown RBP13.66□□□□□ -0.22
HERC1-204ENST00000559715 ZNF512BQ96KM6 892 aaPredicted RBP13.66□□□□□ -0.22
HERC1-204ENST00000559715 P2RX7Q99572 595 aaKnown RBP13.66□□□□□ -0.22
HERC1-204ENST00000559715 TBC1D2Q9BYX2 928 aa13.66□□□□□ -0.22
HERC1-204ENST00000559715 RAI14Q9P0K7 980 aa13.66□□□□□ -0.22
HERC1-204ENST00000559715 PI4KBQ9UBF8 816 aa13.66□□□□□ -0.22
HERC1-204ENST00000559715 FPGT-TNNI3KV9GXZ4 949 aa13.66□□□□□ -0.22
HERC1-204ENST00000559715 VCANP13611 3396 aa13.65□□□□□ -0.22
HERC1-204ENST00000559715 UQCRFS1P1P0C7P4 283 aa13.65□□□□□ -0.22
HERC1-204ENST00000559715 CAPN2P17655 700 aa13.65□□□□□ -0.22
HERC1-204ENST00000559715 BACE1P56817 501 aa13.65□□□□□ -0.22
HERC1-204ENST00000559715 USP6NLQ92738 828 aa13.65□□□□□ -0.22
HERC1-204ENST00000559715 COA7Q96BR5 231 aa13.65□□□□□ -0.22
HERC1-204ENST00000559715 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.65□□□□□ -0.22
HERC1-204ENST00000559715 PIH1D3Q9NQM4 214 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms