RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 REC8O95072 547 aa17.67■□□□□ 0.42
SNRPA1-207ENST00000559309 CYP2D6P10635 497 aa17.67■□□□□ 0.42
SNRPA1-207ENST00000559309 MAP3K11Q16584 847 aa17.67■□□□□ 0.42
SNRPA1-207ENST00000559309 TTC6Q86TZ1 520 aa17.67■□□□□ 0.42
SNRPA1-207ENST00000559309 FOXP4Q8IVH2 680 aaPredicted RBP17.67■□□□□ 0.42
SNRPA1-207ENST00000559309 CDCA5Q96FF9 252 aa17.67■□□□□ 0.42
SNRPA1-207ENST00000559309 BACH2Q9BYV9 841 aa17.67■□□□□ 0.42
SNRPA1-207ENST00000559309 NAPBQ9H115 298 aa17.67■□□□□ 0.42
SNRPA1-207ENST00000559309 PI4KBQ9UBF8 816 aa17.67■□□□□ 0.42
SNRPA1-207ENST00000559309 ZNF112Q9UJU3 913 aa17.67■□□□□ 0.42
SNRPA1-207ENST00000559309 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.67■□□□□ 0.42
SNRPA1-207ENST00000559309 U3KPZ7 1027 aaPredicted RBP17.67■□□□□ 0.42
SNRPA1-207ENST00000559309 OTOFQ9HC10 1997 aa17.66■□□□□ 0.42
SNRPA1-207ENST00000559309 CYP2D7A0A087X1C5 515 aa17.66■□□□□ 0.42
SNRPA1-207ENST00000559309 CYP21A2P08686 494 aa17.66■□□□□ 0.42
SNRPA1-207ENST00000559309 TSGA10IPQ3SY00 556 aa17.66■□□□□ 0.42
SNRPA1-207ENST00000559309 TATDN1Q6P1N9 297 aa17.66■□□□□ 0.42
SNRPA1-207ENST00000559309 C16orf86Q6ZW13 317 aa17.66■□□□□ 0.42
SNRPA1-207ENST00000559309 CSRNP1Q96S65 589 aa17.66■□□□□ 0.42
SNRPA1-207ENST00000559309 ANO2Q9NQ90 1003 aa17.66■□□□□ 0.42
SNRPA1-207ENST00000559309 SAP30BPQ9UHR5 308 aaKnown RBP17.66■□□□□ 0.42
SNRPA1-207ENST00000559309 HERC5Q9UII4 1024 aaKnown RBP17.66■□□□□ 0.42
SNRPA1-207ENST00000559309 CLEC11AQ9Y240 323 aa17.66■□□□□ 0.42
SNRPA1-207ENST00000559309 RBM8AQ9Y5S9 174 aaKnown RBP17.66■□□□□ 0.42
SNRPA1-207ENST00000559309 PHF20L1A8MW92 1017 aa17.65■□□□□ 0.42
SNRPA1-207ENST00000559309 EIF5BO60841 1220 aaKnown RBP17.65■□□□□ 0.42
SNRPA1-207ENST00000559309 HSPA4P34932 840 aa17.65■□□□□ 0.42
SNRPA1-207ENST00000559309 TDO2P48775 406 aa17.65■□□□□ 0.42
SNRPA1-207ENST00000559309 PPARAQ07869 468 aa17.65■□□□□ 0.42
SNRPA1-207ENST00000559309 CTNNA3Q9UI47 895 aa17.65■□□□□ 0.42
SNRPA1-207ENST00000559309 SERPINB13Q9UIV8 391 aa17.65■□□□□ 0.42
SNRPA1-207ENST00000559309 TRAF5O00463 557 aa17.64■□□□□ 0.41
SNRPA1-207ENST00000559309 APPP05067 770 aa17.64■□□□□ 0.41
SNRPA1-207ENST00000559309 HSPA1AP0DMV8 641 aaKnown RBP17.64■□□□□ 0.41
SNRPA1-207ENST00000559309 HSPA1BP0DMV9 641 aaKnown RBP17.64■□□□□ 0.41
SNRPA1-207ENST00000559309 SLURP2P0DP57 97 aa17.64■□□□□ 0.41
SNRPA1-207ENST00000559309 SHMT1P34896 483 aa17.64■□□□□ 0.41
SNRPA1-207ENST00000559309 FMR1Q06787 632 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNRPA1-207ENST00000559309 SUPT20HL1Q3ZLR7 823 aa17.64■□□□□ 0.41
SNRPA1-207ENST00000559309 PRAMEF18Q5VWM3 479 aa17.64■□□□□ 0.41
SNRPA1-207ENST00000559309 KIAA1211Q6ZU35 1233 aa17.64■□□□□ 0.41
SNRPA1-207ENST00000559309 TNS4Q8IZW8 715 aa17.64■□□□□ 0.41
SNRPA1-207ENST00000559309 DDRGK1Q96HY6 314 aa17.64■□□□□ 0.41
SNRPA1-207ENST00000559309 CREBZFQ9NS37 354 aa17.64■□□□□ 0.41
SNRPA1-207ENST00000559309 TAF6LQ9Y6J9 622 aa17.64■□□□□ 0.41
SNRPA1-207ENST00000559309 MYH8P13535 1937 aa17.63■□□□□ 0.41
SNRPA1-207ENST00000559309 SLC27A2O14975 620 aa17.63■□□□□ 0.41
SNRPA1-207ENST00000559309 ORC4O43929 436 aa17.63■□□□□ 0.41
SNRPA1-207ENST00000559309 HLA-DOAP06340 250 aa17.63■□□□□ 0.41
SNRPA1-207ENST00000559309 CST9Q5W186 159 aa17.63■□□□□ 0.41
SNRPA1-207ENST00000559309 TBC1D10CQ8IV04 446 aa17.63■□□□□ 0.41
SNRPA1-207ENST00000559309 STAG1Q8WVM7 1258 aa17.63■□□□□ 0.41
SNRPA1-207ENST00000559309 HOOK2Q96ED9 719 aa17.63■□□□□ 0.41
SNRPA1-207ENST00000559309 SWAP70Q9UH65 585 aa17.63■□□□□ 0.41
SNRPA1-207ENST00000559309 UNCXA6NJT0 531 aa17.62■□□□□ 0.41
SNRPA1-207ENST00000559309 USP2O75604 605 aaPredicted RBP17.62■□□□□ 0.41
SNRPA1-207ENST00000559309 POLR3DP05423 398 aaPredicted RBP17.62■□□□□ 0.41
SNRPA1-207ENST00000559309 PCP11498 1178 aaKnown RBP17.62■□□□□ 0.41
SNRPA1-207ENST00000559309 NT5C2P49902 561 aa17.62■□□□□ 0.41
SNRPA1-207ENST00000559309 RRP1BQ14684 758 aaKnown RBP17.62■□□□□ 0.41
SNRPA1-207ENST00000559309 CREB3L3Q68CJ9 461 aa17.62■□□□□ 0.41
SNRPA1-207ENST00000559309 NKX2-3Q8TAU0 364 aa17.62■□□□□ 0.41
SNRPA1-207ENST00000559309 DYNLL2Q96FJ2 89 aa17.62■□□□□ 0.41
SNRPA1-207ENST00000559309 ATAD5Q96QE3 1844 aa17.62■□□□□ 0.41
SNRPA1-207ENST00000559309 DOCK1Q14185 1865 aa17.61■□□□□ 0.41
SNRPA1-207ENST00000559309 ZNF213O14771 459 aa17.61■□□□□ 0.41
SNRPA1-207ENST00000559309 CDK8P49336 464 aa17.61■□□□□ 0.41
SNRPA1-207ENST00000559309 FKBP1BP68106 108 aa17.61■□□□□ 0.41
SNRPA1-207ENST00000559309 IMMTQ16891 758 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-207ENST00000559309 LDLRAD1Q5T700 205 aa17.61■□□□□ 0.41
SNRPA1-207ENST00000559309 STOX1Q6ZVD7 989 aa17.61■□□□□ 0.41
SNRPA1-207ENST00000559309 RASEFQ8IZ41 740 aa17.61■□□□□ 0.41
SNRPA1-207ENST00000559309 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.61■□□□□ 0.41
SNRPA1-207ENST00000559309 PLIN4Q96Q06 1357 aa17.61■□□□□ 0.41
SNRPA1-207ENST00000559309 PHIPQ8WWQ0 1821 aa17.61■□□□□ 0.41
SNRPA1-207ENST00000559309 MINDY4BA8MYZ0 360 aa17.6■□□□□ 0.41
SNRPA1-207ENST00000559309 RASA1P20936 1047 aa17.6■□□□□ 0.41
SNRPA1-207ENST00000559309 CTDSPL2Q05D32 466 aa17.6■□□□□ 0.41
SNRPA1-207ENST00000559309 AKNAD1Q5T1N1 836 aa17.6■□□□□ 0.41
SNRPA1-207ENST00000559309 DCAF15Q66K64 600 aa17.6■□□□□ 0.41
SNRPA1-207ENST00000559309 ZSCAN29Q8IWY8 852 aaPredicted RBP17.6■□□□□ 0.41
SNRPA1-207ENST00000559309 AMOTL1Q8IY63 956 aa17.6■□□□□ 0.41
SNRPA1-207ENST00000559309 NOVP48745 357 aa17.59■□□□□ 0.41
SNRPA1-207ENST00000559309 HAND2P61296 217 aa17.59■□□□□ 0.41
SNRPA1-207ENST00000559309 JAG1P78504 1218 aa17.59■□□□□ 0.41
SNRPA1-207ENST00000559309 NOL9Q5SY16 702 aaKnown RBP17.59■□□□□ 0.41
SNRPA1-207ENST00000559309 MIGA2Q7L4E1 593 aa17.59■□□□□ 0.41
SNRPA1-207ENST00000559309 SLC44A5Q8NCS7 719 aa17.59■□□□□ 0.41
SNRPA1-207ENST00000559309 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNRPA1-207ENST00000559309 ZNF341Q9BYN7 854 aa17.59■□□□□ 0.41
SNRPA1-207ENST00000559309 GINM1Q9NU53 330 aa17.59■□□□□ 0.41
SNRPA1-207ENST00000559309 NEDD4P46934 1319 aa17.58■□□□□ 0.4
SNRPA1-207ENST00000559309 IGKV6D-41A0A0C4DH26 115 aa17.58■□□□□ 0.4
SNRPA1-207ENST00000559309 FAM196BA6NMK8 535 aa17.58■□□□□ 0.4
SNRPA1-207ENST00000559309 E7EWF7 191 aa17.58■□□□□ 0.4
SNRPA1-207ENST00000559309 RBM25P49756 843 aaKnown RBP17.58■□□□□ 0.4
SNRPA1-207ENST00000559309 COL9A3Q14050 684 aaPredicted RBP17.58■□□□□ 0.4
SNRPA1-207ENST00000559309 SLC4A8Q2Y0W8 1093 aa17.58■□□□□ 0.4
SNRPA1-207ENST00000559309 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.58■□□□□ 0.4
SNRPA1-207ENST00000559309 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms