RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 ANKRD45Q5TZF3 282 aa13.33□□□□□ -0.28
PBX1-213ENST00000558796 TMED8Q6PL24 325 aaPredicted RBP13.33□□□□□ -0.28
PBX1-213ENST00000558796 SCYL3Q8IZE3 742 aa13.33□□□□□ -0.28
PBX1-213ENST00000558796 RIOK1Q9BRS2 568 aaKnown RBP13.33□□□□□ -0.28
PBX1-213ENST00000558796 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.33□□□□□ -0.28
PBX1-213ENST00000558796 TESPA1A2RU30 521 aaPredicted RBP13.32□□□□□ -0.28
PBX1-213ENST00000558796 TBC1D12O60347 775 aa13.32□□□□□ -0.28
PBX1-213ENST00000558796 ALDH1A1P00352 501 aa13.32□□□□□ -0.28
PBX1-213ENST00000558796 PPATQ06203 517 aa13.32□□□□□ -0.28
PBX1-213ENST00000558796 SNAPC2Q13487 334 aa13.32□□□□□ -0.28
PBX1-213ENST00000558796 AAMPQ13685 434 aa13.32□□□□□ -0.28
PBX1-213ENST00000558796 CCDC84Q86UT8 332 aaPredicted RBP13.32□□□□□ -0.28
PBX1-213ENST00000558796 CERS3Q8IU89 383 aa13.32□□□□□ -0.28
PBX1-213ENST00000558796 LCORLQ8N3X6 602 aa13.32□□□□□ -0.28
PBX1-213ENST00000558796 GCC1Q96CN9 775 aa13.32□□□□□ -0.28
PBX1-213ENST00000558796 DHX36Q9H2U1 1008 aaKnown RBP13.32□□□□□ -0.28
PBX1-213ENST00000558796 DNAJC18Q9H819 358 aa13.32□□□□□ -0.28
PBX1-213ENST00000558796 ARMT1Q9H993 441 aa13.32□□□□□ -0.28
PBX1-213ENST00000558796 PICK1Q9NRD5 415 aa13.32□□□□□ -0.28
PBX1-213ENST00000558796 ZBTB47Q9UFB7 747 aaPredicted RBP13.32□□□□□ -0.28
PBX1-213ENST00000558796 CTNND1O60716 968 aaKnown RBP13.31□□□□□ -0.28
PBX1-213ENST00000558796 MBD4O95243 580 aa13.31□□□□□ -0.28
PBX1-213ENST00000558796 HLA-DOAP06340 250 aa13.31□□□□□ -0.28
PBX1-213ENST00000558796 CETPP11597 493 aa13.31□□□□□ -0.28
PBX1-213ENST00000558796 PTPRAP18433 802 aa13.31□□□□□ -0.28
PBX1-213ENST00000558796 MX1P20591 662 aa13.31□□□□□ -0.28
PBX1-213ENST00000558796 CRHR2Q13324 411 aa13.31□□□□□ -0.28
PBX1-213ENST00000558796 RRP1BQ14684 758 aaKnown RBP13.31□□□□□ -0.28
PBX1-213ENST00000558796 OTUD7BQ6GQQ9 843 aa13.31□□□□□ -0.28
PBX1-213ENST00000558796 FAM43AQ8N2R8 423 aa13.31□□□□□ -0.28
PBX1-213ENST00000558796 CRACR2BQ8N4Y2 399 aaPredicted RBP13.31□□□□□ -0.28
PBX1-213ENST00000558796 ZNF296Q8WUU4 475 aaPredicted RBP13.31□□□□□ -0.28
PBX1-213ENST00000558796 TRIM34Q9BYJ4 488 aa13.31□□□□□ -0.28
PBX1-213ENST00000558796 CRNKL1Q9BZJ0 848 aaKnown RBP13.31□□□□□ -0.28
PBX1-213ENST00000558796 PI4KBQ9UBF8 816 aa13.31□□□□□ -0.28
PBX1-213ENST00000558796 HERC5Q9UII4 1024 aaKnown RBP13.31□□□□□ -0.28
PBX1-213ENST00000558796 TTC41PQ6P2S7 1318 aa13.31□□□□□ -0.28
PBX1-213ENST00000558796 HTTP42858 3142 aa13.3□□□□□ -0.28
PBX1-213ENST00000558796 GPR25O00155 361 aa13.3□□□□□ -0.28
PBX1-213ENST00000558796 ERC2O15083 957 aa13.3□□□□□ -0.28
PBX1-213ENST00000558796 CAPN15O75808 1086 aa13.3□□□□□ -0.28
PBX1-213ENST00000558796 TAF1CQ15572 869 aaPredicted RBP13.3□□□□□ -0.28
PBX1-213ENST00000558796 PI4K2BQ8TCG2 481 aa13.3□□□□□ -0.28
PBX1-213ENST00000558796 SDR42E1Q8WUS8 393 aa13.3□□□□□ -0.28
PBX1-213ENST00000558796 CFHR5Q9BXR6 569 aa13.3□□□□□ -0.28
PBX1-213ENST00000558796 RWDD1Q9H446 243 aaPredicted RBP13.3□□□□□ -0.28
PBX1-213ENST00000558796 KCNH4Q9UQ05 1017 aa13.3□□□□□ -0.28
PBX1-213ENST00000558796 ZHX2Q9Y6X8 837 aa13.3□□□□□ -0.28
PBX1-213ENST00000558796 SALL3Q9BXA9 1300 aa13.3□□□□□ -0.28
PBX1-213ENST00000558796 TRIM75PA6NK02 468 aa13.29□□□□□ -0.28
PBX1-213ENST00000558796 BTBD19C9JJ37 291 aa13.29□□□□□ -0.28
PBX1-213ENST00000558796 GDF11O95390 407 aa13.29□□□□□ -0.28
PBX1-213ENST00000558796 IGHDP01880 384 aa13.29□□□□□ -0.28
PBX1-213ENST00000558796 DGKZQ13574 1117 aa13.29□□□□□ -0.28
PBX1-213ENST00000558796 SHROOM1Q2M3G4 852 aaPredicted RBP13.29□□□□□ -0.28
PBX1-213ENST00000558796 IFFO2Q5TF58 517 aa13.29□□□□□ -0.28
PBX1-213ENST00000558796 B4GALNT3Q6L9W6 998 aa13.29□□□□□ -0.28
PBX1-213ENST00000558796 KBTBD3Q8NAB2 608 aa13.29□□□□□ -0.28
PBX1-213ENST00000558796 LNPKQ9C0E8 428 aa13.29□□□□□ -0.28
PBX1-213ENST00000558796 PRKAB2O43741 272 aa13.28□□□□□ -0.28
PBX1-213ENST00000558796 GLRX3O76003 335 aaKnown RBP13.28□□□□□ -0.28
PBX1-213ENST00000558796 CAP2P40123 477 aa13.28□□□□□ -0.28
PBX1-213ENST00000558796 EVX2Q03828 476 aa13.28□□□□□ -0.28
PBX1-213ENST00000558796 UBE3CQ15386 1083 aa13.28□□□□□ -0.28
PBX1-213ENST00000558796 ZSCAN25Q6NSZ9 544 aa13.28□□□□□ -0.28
PBX1-213ENST00000558796 MCOLN1Q9GZU1 580 aa13.28□□□□□ -0.28
PBX1-213ENST00000558796 PUS7LQ9H0K6 701 aaKnown RBP13.28□□□□□ -0.28
PBX1-213ENST00000558796 MCM9Q9NXL9 1143 aa13.28□□□□□ -0.28
PBX1-213ENST00000558796 CENPFP49454 3210 aa13.28□□□□□ -0.28
PBX1-213ENST00000558796 MYH4Q9Y623 1939 aa13.27□□□□□ -0.28
PBX1-213ENST00000558796 FKTNO75072 461 aa13.27□□□□□ -0.29
PBX1-213ENST00000558796 POLR3DP05423 398 aaPredicted RBP13.27□□□□□ -0.29
PBX1-213ENST00000558796 CYP2D6P10635 497 aa13.27□□□□□ -0.29
PBX1-213ENST00000558796 PLCD1P51178 756 aa13.27□□□□□ -0.29
PBX1-213ENST00000558796 JAG1P78504 1218 aa13.27□□□□□ -0.29
PBX1-213ENST00000558796 MOGSQ13724 837 aa13.27□□□□□ -0.29
PBX1-213ENST00000558796 GADL1Q6ZQY3 521 aa13.27□□□□□ -0.29
PBX1-213ENST00000558796 METTL16Q86W50 562 aaKnown RBP13.27□□□□□ -0.29
PBX1-213ENST00000558796 FOXP4Q8IVH2 680 aaPredicted RBP13.27□□□□□ -0.29
PBX1-213ENST00000558796 SMC5Q8IY18 1101 aa13.27□□□□□ -0.29
PBX1-213ENST00000558796 FSD1Q9BTV5 496 aa13.27□□□□□ -0.29
PBX1-213ENST00000558796 DCP1AQ9NPI6 582 aaPredicted RBP13.27□□□□□ -0.29
PBX1-213ENST00000558796 SERPINB13Q9UIV8 391 aa13.27□□□□□ -0.29
PBX1-213ENST00000558796 AFG3L2Q9Y4W6 797 aa13.27□□□□□ -0.29
PBX1-213ENST00000558796 DOCK3Q8IZD9 2030 aa13.27□□□□□ -0.29
PBX1-213ENST00000558796 A0A0G2JLL6 359 aaPredicted RBP13.26□□□□□ -0.29
PBX1-213ENST00000558796 PDHXO00330 501 aa13.26□□□□□ -0.29
PBX1-213ENST00000558796 CXCL11O14625 94 aa13.26□□□□□ -0.29
PBX1-213ENST00000558796 RNF113AO15541 343 aaKnown RBP13.26□□□□□ -0.29
PBX1-213ENST00000558796 NOM1Q5C9Z4 860 aaKnown RBP13.26□□□□□ -0.29
PBX1-213ENST00000558796 PRRT2Q7Z6L0 340 aaPredicted RBP13.26□□□□□ -0.29
PBX1-213ENST00000558796 CTU1Q7Z7A3 348 aaKnown RBP13.26□□□□□ -0.29
PBX1-213ENST00000558796 ANKRD23Q86SG2 305 aa13.26□□□□□ -0.29
PBX1-213ENST00000558796 TTC6Q86TZ1 520 aa13.26□□□□□ -0.29
PBX1-213ENST00000558796 ABHD8Q96I13 439 aa13.26□□□□□ -0.29
PBX1-213ENST00000558796 GREB1LQ9C091 1923 aaPredicted RBP13.26□□□□□ -0.29
PBX1-213ENST00000558796 EHD4Q9H223 541 aa13.26□□□□□ -0.29
PBX1-213ENST00000558796 ZFYVE28Q9HCC9 887 aa13.26□□□□□ -0.29
PBX1-213ENST00000558796 ZBTB21Q9ULJ3 1066 aa13.26□□□□□ -0.29
PBX1-213ENST00000558796 SLC4A4Q9Y6R1 1079 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms