RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 APOA5Q6Q788 366 aa15.2■□□□□ 0.02
SMAD3-207ENST00000558763 MFSD6Q6ZSS7 791 aa15.2■□□□□ 0.02
SMAD3-207ENST00000558763 KRT23Q9C075 422 aa15.2■□□□□ 0.02
SMAD3-207ENST00000558763 GRIN3BO60391 1043 aa15.19■□□□□ 0.02
SMAD3-207ENST00000558763 GADD45BO75293 160 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-207ENST00000558763 LIFRP42702 1097 aa15.19■□□□□ 0.02
SMAD3-207ENST00000558763 DNM1Q05193 864 aaKnown RBP15.19■□□□□ 0.02
SMAD3-207ENST00000558763 USP48Q86UV5 1035 aa15.19■□□□□ 0.02
SMAD3-207ENST00000558763 FERMT3Q86UX7 667 aa15.19■□□□□ 0.02
SMAD3-207ENST00000558763 RAB11FIP4Q86YS3 637 aa15.19■□□□□ 0.02
SMAD3-207ENST00000558763 KIAA0825Q8IV33 1275 aa15.19■□□□□ 0.02
SMAD3-207ENST00000558763 RESTQ13127 1097 aa15.18■□□□□ 0.02
SMAD3-207ENST00000558763 CIAPIN1Q6FI81 312 aa15.18■□□□□ 0.02
SMAD3-207ENST00000558763 FAM217BQ9NTX9 383 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-207ENST00000558763 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-207ENST00000558763 ATP6V1DQ9Y5K8 247 aa15.18■□□□□ 0.02
SMAD3-207ENST00000558763 ADAMTSL1Q8N6G6 1762 aa15.18■□□□□ 0.02
SMAD3-207ENST00000558763 FZD9O00144 591 aa15.18■□□□□ 0.02
SMAD3-207ENST00000558763 PPFIA3O75145 1194 aa15.18■□□□□ 0.02
SMAD3-207ENST00000558763 C9orf131Q5VYM1 1079 aa15.18■□□□□ 0.02
SMAD3-207ENST00000558763 FAM173BQ6P4H8 233 aa15.18■□□□□ 0.02
SMAD3-207ENST00000558763 MTA3Q9BTC8 594 aa15.18■□□□□ 0.02
SMAD3-207ENST00000558763 NAP1L2Q9ULW6 460 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-207ENST00000558763 TTF2Q9UNY4 1162 aaKnown RBP15.18■□□□□ 0.02
SMAD3-207ENST00000558763 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.18■□□□□ 0.02
SMAD3-207ENST00000558763 ZNF541Q9H0D2 1346 aa15.18■□□□□ 0.02
SMAD3-207ENST00000558763 MINDY4BA8MYZ0 360 aa15.17■□□□□ 0.02
SMAD3-207ENST00000558763 USP17L12C9JPN9 530 aa15.17■□□□□ 0.02
SMAD3-207ENST00000558763 USP17L21D6R901 530 aa15.17■□□□□ 0.02
SMAD3-207ENST00000558763 SCNN1DP51172 638 aa15.17■□□□□ 0.02
SMAD3-207ENST00000558763 EIF6P56537 245 aaKnown RBP15.17■□□□□ 0.02
SMAD3-207ENST00000558763 PPP4CP60510 307 aa15.17■□□□□ 0.02
SMAD3-207ENST00000558763 RSBN1LQ6PCB5 846 aaPredicted RBP15.17■□□□□ 0.02
SMAD3-207ENST00000558763 CRNKL1Q9BZJ0 848 aaKnown RBP15.17■□□□□ 0.02
SMAD3-207ENST00000558763 RNF41Q9H4P4 317 aaPredicted RBP15.17■□□□□ 0.02
SMAD3-207ENST00000558763 ATP8A2Q9NTI2 1148 aa15.17■□□□□ 0.02
SMAD3-207ENST00000558763 GJA3Q9Y6H8 435 aa15.17■□□□□ 0.02
SMAD3-207ENST00000558763 MROH7-TTC4A0A0A0MT08 1334 aa15.17■□□□□ 0.02
SMAD3-207ENST00000558763 VIL1P09327 827 aaKnown RBP15.16■□□□□ 0.02
SMAD3-207ENST00000558763 CDC27P30260 824 aa15.16■□□□□ 0.02
SMAD3-207ENST00000558763 FKBP1AP62942 108 aaKnown RBP15.16■□□□□ 0.02
SMAD3-207ENST00000558763 NTRK3Q16288 839 aa15.16■□□□□ 0.02
SMAD3-207ENST00000558763 SBK1Q52WX2 424 aa15.16■□□□□ 0.02
SMAD3-207ENST00000558763 TMEM67Q5HYA8 995 aa15.16■□□□□ 0.02
SMAD3-207ENST00000558763 STK11IPQ8N1F8 1099 aa15.16■□□□□ 0.02
SMAD3-207ENST00000558763 TMEM63CQ9P1W3 806 aa15.16■□□□□ 0.02
SMAD3-207ENST00000558763 CYP2D6P10635 497 aa15.16■□□□□ 0.02
SMAD3-207ENST00000558763 SEC23AQ15436 765 aa15.16■□□□□ 0.02
SMAD3-207ENST00000558763 RRP12Q5JTH9 1297 aaKnown RBP15.16■□□□□ 0.02
SMAD3-207ENST00000558763 GAS2L3Q86XJ1 694 aa15.16■□□□□ 0.02
SMAD3-207ENST00000558763 RBM27Q9P2N5 1060 aaKnown RBP15.16■□□□□ 0.02
SMAD3-207ENST00000558763 SUGT1Q9Y2Z0 365 aa15.16■□□□□ 0.02
SMAD3-207ENST00000558763 IFIT3O14879 490 aaKnown RBP15.15■□□□□ 0.02
SMAD3-207ENST00000558763 RXRAP19793 462 aa15.15■□□□□ 0.02
SMAD3-207ENST00000558763 ADD1P35611 737 aaKnown RBP15.15■□□□□ 0.02
SMAD3-207ENST00000558763 TNIP1Q15025 636 aa15.15■□□□□ 0.02
SMAD3-207ENST00000558763 CAVIN1Q6NZI2 390 aaKnown RBP15.15■□□□□ 0.02
SMAD3-207ENST00000558763 FAM184AQ8NB25 1140 aa15.15■□□□□ 0.02
SMAD3-207ENST00000558763 SH3RF3Q8TEJ3 882 aaPredicted RBP15.15■□□□□ 0.02
SMAD3-207ENST00000558763 ZKSCAN3Q9BRR0 538 aa15.15■□□□□ 0.02
SMAD3-207ENST00000558763 GAKO14976 1311 aa15.15■□□□□ 0.02
SMAD3-207ENST00000558763 MYO3BQ8WXR4 1341 aa15.15■□□□□ 0.02
SMAD3-207ENST00000558763 ROBO3Q96MS0 1386 aa15.15■□□□□ 0.02
SMAD3-207ENST00000558763 FIBPO43427 364 aa15.15■□□□□ 0.02
SMAD3-207ENST00000558763 MBD3O95983 291 aa15.15■□□□□ 0.02
SMAD3-207ENST00000558763 METAP2P50579 478 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMAD3-207ENST00000558763 GSTO1P78417 241 aa15.15■□□□□ 0.02
SMAD3-207ENST00000558763 MICU3Q86XE3 530 aa15.15■□□□□ 0.02
SMAD3-207ENST00000558763 CHMP4CQ96CF2 233 aa15.15■□□□□ 0.02
SMAD3-207ENST00000558763 MYL10Q9BUA6 226 aa15.15■□□□□ 0.02
SMAD3-207ENST00000558763 ARPP21Q9UBL0 812 aaPredicted RBP15.15■□□□□ 0.02
SMAD3-207ENST00000558763 GPR75-ASB3A0A0A6YYF3 556 aa15.14■□□□□ 0.01
SMAD3-207ENST00000558763 ZBTB43O43298 467 aa15.14■□□□□ 0.01
SMAD3-207ENST00000558763 ORC4O43929 436 aa15.14■□□□□ 0.01
SMAD3-207ENST00000558763 DHX16O60231 1041 aaKnown RBP15.14■□□□□ 0.01
SMAD3-207ENST00000558763 PCP11498 1178 aaKnown RBP15.14■□□□□ 0.01
SMAD3-207ENST00000558763 TTC6Q86TZ1 520 aa15.14■□□□□ 0.01
SMAD3-207ENST00000558763 FAM163AQ96GL9 167 aaPredicted RBP15.14■□□□□ 0.01
SMAD3-207ENST00000558763 MYH1P12882 1939 aa15.14■□□□□ 0.01
SMAD3-207ENST00000558763 RANBP6O60518 1105 aaKnown RBP15.13■□□□□ 0.01
SMAD3-207ENST00000558763 PRDM1O75626 825 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 ZSCAN23Q3MJ62 389 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 ESR2Q92731 530 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 GMLQ99445 158 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 TOMM22Q9NS69 142 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 TNKSO95271 1327 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 USP17L8P0C7I0 530 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 GMPSP49915 693 aaPredicted RBP15.13■□□□□ 0.01
SMAD3-207ENST00000558763 RBM5P52756 815 aaKnown RBP eCLIP15.13■□□□□ 0.01
SMAD3-207ENST00000558763 RHBDL3P58872 404 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 ZNF445P59923 1031 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 SLF2Q8IX21 1173 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 ENAHQ8N8S7 591 aaPredicted RBP15.13■□□□□ 0.01
SMAD3-207ENST00000558763 AGBL3Q8NEM8 1001 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 TEKT1Q969V4 418 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 ORC3Q9UBD5 711 aaPredicted RBP15.13■□□□□ 0.01
SMAD3-207ENST00000558763 KIF3AQ9Y496 699 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 DAGLAQ9Y4D2 1042 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 PCDHAC2Q9Y5I4 1007 aa15.13■□□□□ 0.01
SMAD3-207ENST00000558763 ELP1O95163 1332 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms