RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 COL15A1P39059 1388 aa18.33■□□□□ 0.52
HMBOX1-212ENST00000558662 DDX60Q8IY21 1712 aaKnown RBP18.33■□□□□ 0.52
HMBOX1-212ENST00000558662 ANKRD65E5RJM6 399 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 ITIH3Q06033 890 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 PLEKHO1Q53GL0 409 aaPredicted RBP18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 FBXW10Q5XX13 1052 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 CYP26C1Q6V0L0 522 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 METTL16Q86W50 562 aaKnown RBP18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 EGFL6Q8IUX8 553 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 CLIC6Q96NY7 704 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 DBF4Q9UBU7 674 aaPredicted RBP18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 FAM184BQ9ULE4 1060 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 PCDHA5Q9Y5H7 936 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 CAPN7Q9Y6W3 813 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 GRIN2DO15399 1336 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 GGCXP38435 758 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 SARSP49591 514 aaKnown RBP18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 PLCD1P51178 756 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 PNOCQ13519 176 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 KSR2Q6VAB6 950 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 STOX1Q6ZVD7 989 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 C3orf20Q8ND61 904 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 IL17REQ8NFR9 667 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 EYA1Q99502 592 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 CCDC8Q9H0W5 538 aaPredicted RBP18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 HAUS4Q9H6D7 363 aa18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 ACTR5Q9H9F9 607 aaPredicted RBP18.32■□□□□ 0.52
HMBOX1-212ENST00000558662 NRXN3Q9Y4C0 1643 aa18.31■□□□□ 0.52
HMBOX1-212ENST00000558662 A0A1B0GUA9 196 aa18.31■□□□□ 0.52
HMBOX1-212ENST00000558662 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
HMBOX1-212ENST00000558662 CCT2P78371 535 aaKnown RBP18.31■□□□□ 0.52
HMBOX1-212ENST00000558662 MDM2Q00987 491 aaPredicted RBP18.31■□□□□ 0.52
HMBOX1-212ENST00000558662 GUCY1B3Q02153 619 aa18.31■□□□□ 0.52
HMBOX1-212ENST00000558662 MORC3Q14149 939 aa18.31■□□□□ 0.52
HMBOX1-212ENST00000558662 CCNI2Q6ZMN8 369 aaPredicted RBP18.31■□□□□ 0.52
HMBOX1-212ENST00000558662 C1orf131Q8NDD1 294 aaKnown RBP18.31■□□□□ 0.52
HMBOX1-212ENST00000558662 LINS1Q8NG48 757 aa18.31■□□□□ 0.52
HMBOX1-212ENST00000558662 ZKSCAN4Q969J2 545 aaPredicted RBP18.31■□□□□ 0.52
HMBOX1-212ENST00000558662 HAUS7Q99871 368 aa18.31■□□□□ 0.52
HMBOX1-212ENST00000558662 JPH2Q9BR39 696 aaPredicted RBP18.31■□□□□ 0.52
HMBOX1-212ENST00000558662 IRX2Q9BZI1 471 aaPredicted RBP18.31■□□□□ 0.52
HMBOX1-212ENST00000558662 ZKSCAN8Q15776 578 aaPredicted RBP18.3■□□□□ 0.52
HMBOX1-212ENST00000558662 PAPD7Q5XG87 772 aaKnown RBP18.3■□□□□ 0.52
HMBOX1-212ENST00000558662 SHC4Q6S5L8 630 aa18.3■□□□□ 0.52
HMBOX1-212ENST00000558662 NOA1Q8NC60 698 aaKnown RBP18.3■□□□□ 0.52
HMBOX1-212ENST00000558662 KCNH3Q9ULD8 1083 aa18.3■□□□□ 0.52
HMBOX1-212ENST00000558662 PA2G4Q9UQ80 394 aaKnown RBP18.3■□□□□ 0.52
HMBOX1-212ENST00000558662 GOLGA6L7A0A1B0GV03 622 aa18.3■□□□□ 0.52
HMBOX1-212ENST00000558662 GRM8O00222 908 aa18.3■□□□□ 0.52
HMBOX1-212ENST00000558662 CDKL5O76039 1030 aa18.3■□□□□ 0.52
HMBOX1-212ENST00000558662 GNGT1P63211 74 aa18.3■□□□□ 0.52
HMBOX1-212ENST00000558662 AKAP17AQ02040 695 aaKnown RBP18.3■□□□□ 0.52
HMBOX1-212ENST00000558662 PTPAQ15257 358 aa18.3■□□□□ 0.52
HMBOX1-212ENST00000558662 SPATA1Q5VX52 437 aa18.3■□□□□ 0.52
HMBOX1-212ENST00000558662 MAN1B1Q9UKM7 699 aa18.3■□□□□ 0.52
HMBOX1-212ENST00000558662 ANO9A1A5B4 782 aa18.29■□□□□ 0.52
HMBOX1-212ENST00000558662 E7EWF7 191 aa18.29■□□□□ 0.52
HMBOX1-212ENST00000558662 AGPSO00116 658 aa18.29■□□□□ 0.52
HMBOX1-212ENST00000558662 POLR3DP05423 398 aaPredicted RBP18.29■□□□□ 0.52
HMBOX1-212ENST00000558662 PIP4K2AP48426 406 aaPredicted RBP18.29■□□□□ 0.52
HMBOX1-212ENST00000558662 FOSBP53539 338 aa18.29■□□□□ 0.52
HMBOX1-212ENST00000558662 IFFO1Q0D2I5 559 aa18.29■□□□□ 0.52
HMBOX1-212ENST00000558662 NNTQ13423 1086 aa18.29■□□□□ 0.52
HMBOX1-212ENST00000558662 MTF1Q14872 753 aa18.29■□□□□ 0.52
HMBOX1-212ENST00000558662 KBTBD3Q8NAB2 608 aa18.29■□□□□ 0.52
HMBOX1-212ENST00000558662 SELENOOQ9BVL4 669 aa18.29■□□□□ 0.52
HMBOX1-212ENST00000558662 PLEKHA4Q9H4M7 779 aa18.29■□□□□ 0.52
HMBOX1-212ENST00000558662 VCPKMTQ9H867 229 aa18.29■□□□□ 0.52
HMBOX1-212ENST00000558662 ODF2LQ9ULJ1 636 aa18.29■□□□□ 0.52
HMBOX1-212ENST00000558662 USP54Q70EL1 1684 aa18.28■□□□□ 0.52
HMBOX1-212ENST00000558662 CDR1P51861 262 aa18.28■□□□□ 0.52
HMBOX1-212ENST00000558662 RBL2Q08999 1139 aa18.28■□□□□ 0.52
HMBOX1-212ENST00000558662 POSTNQ15063 836 aa18.28■□□□□ 0.52
HMBOX1-212ENST00000558662 AENQ8WTP8 325 aaKnown RBP18.28■□□□□ 0.52
HMBOX1-212ENST00000558662 KLC4Q9NSK0 619 aa18.28■□□□□ 0.52
HMBOX1-212ENST00000558662 CHPF2Q9P2E5 772 aa18.28■□□□□ 0.52
HMBOX1-212ENST00000558662 SAR1BQ9Y6B6 198 aa18.28■□□□□ 0.52
HMBOX1-212ENST00000558662 ZMYM6O95789 1325 aa18.28■□□□□ 0.52
HMBOX1-212ENST00000558662 NDUFAB1O14561 156 aa18.27■□□□□ 0.52
HMBOX1-212ENST00000558662 SLC8A1P32418 973 aa18.27■□□□□ 0.52
HMBOX1-212ENST00000558662 SLC8A3P57103 927 aa18.27■□□□□ 0.52
HMBOX1-212ENST00000558662 ACTN3Q08043 901 aaPredicted RBP18.27■□□□□ 0.52
HMBOX1-212ENST00000558662 ISM2Q6H9L7 571 aa18.27■□□□□ 0.52
HMBOX1-212ENST00000558662 ZNF579Q8NAF0 562 aaKnown RBP18.27■□□□□ 0.52
HMBOX1-212ENST00000558662 P3H4Q92791 437 aa18.27■□□□□ 0.52
HMBOX1-212ENST00000558662 SEC62Q99442 399 aaKnown RBP18.27■□□□□ 0.52
HMBOX1-212ENST00000558662 NCOA5Q9HCD5 579 aaKnown RBP18.27■□□□□ 0.52
HMBOX1-212ENST00000558662 ADD3Q9UEY8 706 aaKnown RBP18.27■□□□□ 0.52
HMBOX1-212ENST00000558662 PLEKHG1Q9ULL1 1385 aa18.27■□□□□ 0.52
HMBOX1-212ENST00000558662 C4AP0C0L4 1744 aa18.27■□□□□ 0.52
HMBOX1-212ENST00000558662 C4BP0C0L5 1744 aa18.27■□□□□ 0.52
HMBOX1-212ENST00000558662 RASSF9O75901 435 aa18.27■□□□□ 0.51
HMBOX1-212ENST00000558662 DDX58O95786 925 aaKnown RBP18.27■□□□□ 0.51
HMBOX1-212ENST00000558662 EZRP15311 586 aaKnown RBP18.27■□□□□ 0.51
HMBOX1-212ENST00000558662 TNFRSF8P28908 595 aa18.27■□□□□ 0.51
HMBOX1-212ENST00000558662 PDE4BQ07343 736 aa18.27■□□□□ 0.51
HMBOX1-212ENST00000558662 SPAG1Q07617 926 aa18.27■□□□□ 0.51
HMBOX1-212ENST00000558662 WASHC4Q2M389 1173 aa18.27■□□□□ 0.51
HMBOX1-212ENST00000558662 EMBQ6PCB8 327 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms