RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 DNAAF2Q9NVR5 837 aaKnown RBP11.27□□□□□ -0.6
TRPM1-207ENST00000558445 GGA2Q9UJY4 613 aa11.27□□□□□ -0.6
TRPM1-207ENST00000558445 ATP6V1G2O95670 118 aa11.27□□□□□ -0.61
TRPM1-207ENST00000558445 LSP1P33241 339 aa11.27□□□□□ -0.61
TRPM1-207ENST00000558445 KBTBD12Q3ZCT8 623 aa11.27□□□□□ -0.61
TRPM1-207ENST00000558445 CRELD2Q6UXH1 353 aaPredicted RBP11.27□□□□□ -0.61
TRPM1-207ENST00000558445 RUFY3Q7L099 469 aa11.27□□□□□ -0.61
TRPM1-207ENST00000558445 CCND1P24385 295 aa11.27□□□□□ -0.61
TRPM1-207ENST00000558445 SAFB2Q14151 953 aaKnown RBP eCLIP11.27□□□□□ -0.61
TRPM1-207ENST00000558445 DDX12PQ92771 950 aa11.27□□□□□ -0.61
TRPM1-207ENST00000558445 ANKRD27Q96NW4 1050 aa11.27□□□□□ -0.61
TRPM1-207ENST00000558445 PHACTR1Q9C0D0 580 aa11.27□□□□□ -0.61
TRPM1-207ENST00000558445 LARSQ9P2J5 1176 aaKnown RBP11.27□□□□□ -0.61
TRPM1-207ENST00000558445 FRMD4BQ9Y2L6 1034 aa11.27□□□□□ -0.61
TRPM1-207ENST00000558445 SNX14Q9Y5W7 946 aa11.27□□□□□ -0.61
TRPM1-207ENST00000558445 PRAG1Q86YV5 1406 aa11.27□□□□□ -0.61
TRPM1-207ENST00000558445 SPDYE3A6NKU9 549 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 N4BP3O15049 544 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 USP14P54578 494 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 VSTM4Q8IW00 320 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 AFAP1Q8N556 730 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 KIAA1468Q9P260 1216 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 ZSCAN9O15535 394 aaPredicted RBP11.26□□□□□ -0.61
TRPM1-207ENST00000558445 SLC4A8Q2Y0W8 1093 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 CCDC197Q8NCU1 140 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 ZNF653Q96CK0 615 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 IKBKBO14920 756 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 FAM107AO95990 144 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 PSMC4P43686 418 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 TBC1D1Q86TI0 1168 aaPredicted RBP11.26□□□□□ -0.61
TRPM1-207ENST00000558445 MMTAG2Q9BU76 263 aaKnown RBP11.26□□□□□ -0.61
TRPM1-207ENST00000558445 SIL1Q9H173 461 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 HELLSQ9NRZ9 838 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 RHBDL2Q9NX52 303 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 PCDHGC5Q9Y5F6 944 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 SAR1BQ9Y6B6 198 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
TRPM1-207ENST00000558445 SMNDC1O75940 238 aaKnown RBP eCLIP11.26□□□□□ -0.61
TRPM1-207ENST00000558445 RNF8O76064 485 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 SYF2O95926 243 aaKnown RBP11.26□□□□□ -0.61
TRPM1-207ENST00000558445 SCNN1BP51168 640 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 MPP3Q13368 585 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 ZFAND2BQ8WV99 257 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 TEKT1Q969V4 418 aa11.26□□□□□ -0.61
TRPM1-207ENST00000558445 UGGT2Q9NYU1 1516 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 TARSL2A2RTX5 802 aaKnown RBP11.25□□□□□ -0.61
TRPM1-207ENST00000558445 EPHB4P54760 987 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 ADKP55263 362 aaKnown RBP11.25□□□□□ -0.61
TRPM1-207ENST00000558445 SEPT6Q14141 434 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 MUM1Q2TAK8 710 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 LARP1Q6PKG0 1096 aaKnown RBP11.25□□□□□ -0.61
TRPM1-207ENST00000558445 BRF1Q92994 677 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 FTOQ9C0B1 505 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRPM1-207ENST00000558445 GUCA1BQ9UMX6 200 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 CNGA4Q8IV77 575 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 PPFIBP2Q8ND30 876 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 ARHGEF1Q92888 912 aaKnown RBP11.25□□□□□ -0.61
TRPM1-207ENST00000558445 IWS1Q96ST2 819 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 PICK1Q9NRD5 415 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 PZPP20742 1482 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 GNAI2P04899 355 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 FAM200BP0CF97 657 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 ATP2A2P16615 1042 aaKnown RBP11.25□□□□□ -0.61
TRPM1-207ENST00000558445 MATR3P43243 847 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRPM1-207ENST00000558445 HNRNPMP52272 730 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRPM1-207ENST00000558445 DEUP1Q05D60 604 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 KLC1Q07866 573 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 KIAA0753Q2KHM9 967 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 NAA16Q6N069 864 aaPredicted RBP11.25□□□□□ -0.61
TRPM1-207ENST00000558445 RUFY4Q6ZNE9 571 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 DDX46Q7L014 1031 aaKnown RBP11.25□□□□□ -0.61
TRPM1-207ENST00000558445 NBPF15Q8N660 670 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 HAUS1Q96CS2 278 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 UBAP1Q9NZ09 502 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 C2CD2Q9Y426 696 aa11.25□□□□□ -0.61
TRPM1-207ENST00000558445 PAK2Q13177 524 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 CDC37Q16543 378 aaPredicted RBP11.24□□□□□ -0.61
TRPM1-207ENST00000558445 SLC44A4Q53GD3 710 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 EXOC8Q8IYI6 725 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 ATL2Q8NHH9 583 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 BPIFA3Q9BQP9 254 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 SPATA7Q9P0W8 599 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 WDR37Q9Y2I8 494 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 ABCC5O15440 1437 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 YEATS4O95619 227 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 SEPT7Q16181 437 aaKnown RBP11.24□□□□□ -0.61
TRPM1-207ENST00000558445 TSHZ3Q63HK5 1081 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 MTHFD1LQ6UB35 978 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 MRPL50Q8N5N7 158 aaKnown RBP11.24□□□□□ -0.61
TRPM1-207ENST00000558445 USH1CQ9Y6N9 552 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 TTC21AQ8NDW8 1320 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 GMNCA6NCL1 334 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 IPO5O00410 1097 aaKnown RBP11.24□□□□□ -0.61
TRPM1-207ENST00000558445 PDHA1P08559 390 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 PIP4K2AP48426 406 aaPredicted RBP11.24□□□□□ -0.61
TRPM1-207ENST00000558445 ZBTB17Q13105 803 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 BLMHQ13867 455 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 C16orf87Q6PH81 154 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 PRAM1Q96QH2 718 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 EHD4Q9H223 541 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms