RNA–Protein interactions for RNA: ENST00000558339.1

SPG21-205, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-205ENST00000558339 COLQQ9Y215 455 aaPredicted RBP27.14■■□□□ 1.94
SPG21-205ENST00000558339 FLT3LGP49771 235 aa27.13■■□□□ 1.93
SPG21-205ENST00000558339 TNNI3KQ59H18 835 aa27.13■■□□□ 1.93
SPG21-205ENST00000558339 SMCR8Q8TEV9 937 aaPredicted RBP27.13■■□□□ 1.93
SPG21-205ENST00000558339 DBNDD2Q9BQY9 259 aa27.13■■□□□ 1.93
SPG21-205ENST00000558339 RNF208Q9H0X6 261 aa27.13■■□□□ 1.93
SPG21-205ENST00000558339 FPGT-TNNI3KV9GXZ4 949 aa27.13■■□□□ 1.93
SPG21-205ENST00000558339 CEP290O15078 2479 aa27.12■■□□□ 1.93
SPG21-205ENST00000558339 CAP2P40123 477 aa27.12■■□□□ 1.93
SPG21-205ENST00000558339 FXR1P51114 621 aaKnown RBP eCLIP27.12■■□□□ 1.93
SPG21-205ENST00000558339 UBXN2AP68543 259 aa27.12■■□□□ 1.93
SPG21-205ENST00000558339 SPP2Q13103 211 aa27.12■■□□□ 1.93
SPG21-205ENST00000558339 ZKSCAN2Q63HK3 967 aa27.12■■□□□ 1.93
SPG21-205ENST00000558339 NKX2-3Q8TAU0 364 aa27.12■■□□□ 1.93
SPG21-205ENST00000558339 SSH3Q8TE77 659 aa27.12■■□□□ 1.93
SPG21-205ENST00000558339 UNC93B1Q9H1C4 597 aa27.12■■□□□ 1.93
SPG21-205ENST00000558339 ADCY3O60266 1144 aa27.11■■□□□ 1.93
SPG21-205ENST00000558339 ELNP15502 786 aa27.11■■□□□ 1.93
SPG21-205ENST00000558339 ANKRD13CQ8N6S4 541 aa27.11■■□□□ 1.93
SPG21-205ENST00000558339 PROCA1Q8NCQ7 364 aaPredicted RBP27.11■■□□□ 1.93
SPG21-205ENST00000558339 ZNF280CQ8ND82 737 aa27.11■■□□□ 1.93
SPG21-205ENST00000558339 TNPO2O14787 897 aaKnown RBP27.1■■□□□ 1.93
SPG21-205ENST00000558339 ATP8B2P98198 1209 aa27.1■■□□□ 1.93
SPG21-205ENST00000558339 TTC39AQ5SRH9 613 aa27.1■■□□□ 1.93
SPG21-205ENST00000558339 ADGRA1Q86SQ6 560 aa27.1■■□□□ 1.93
SPG21-205ENST00000558339 C1orf115Q9H7X2 142 aa27.1■■□□□ 1.93
SPG21-205ENST00000558339 AATFQ9NY61 560 aaKnown RBP eCLIP27.1■■□□□ 1.932e-6■■■□□ 17.4
SPG21-205ENST00000558339 SIPA1L1O43166 1804 aa27.09■■□□□ 1.93
SPG21-205ENST00000558339 CYP2E1P05181 493 aaPredicted RBP27.09■■□□□ 1.93
SPG21-205ENST00000558339 IRF5Q13568 498 aa27.09■■□□□ 1.93
SPG21-205ENST00000558339 NAA16Q6N069 864 aaPredicted RBP27.09■■□□□ 1.93
SPG21-205ENST00000558339 U2AF1L4Q8WU68 220 aaKnown RBP27.09■■□□□ 1.93
SPG21-205ENST00000558339 LOC285556D6RIA3 1793 aa27.09■■□□□ 1.93
SPG21-205ENST00000558339 INHAP05111 366 aa27.08■■□□□ 1.93
SPG21-205ENST00000558339 HMGCS2P54868 508 aa27.08■■□□□ 1.93
SPG21-205ENST00000558339 PPP4CP60510 307 aa27.08■■□□□ 1.93
SPG21-205ENST00000558339 JAG1P78504 1218 aa27.08■■□□□ 1.93
SPG21-205ENST00000558339 FAM110CQ1W6H9 321 aa27.08■■□□□ 1.93
SPG21-205ENST00000558339 PXYLP1Q8TE99 480 aa27.08■■□□□ 1.93
SPG21-205ENST00000558339 HERC5Q9UII4 1024 aaKnown RBP27.08■■□□□ 1.93
SPG21-205ENST00000558339 PNMA3Q9UL41 463 aa27.08■■□□□ 1.93
SPG21-205ENST00000558339 USP17L5A8MUK1 530 aa27.07■■□□□ 1.92
SPG21-205ENST00000558339 SH3D19Q5HYK7 790 aa27.07■■□□□ 1.92
SPG21-205ENST00000558339 CCDC158Q5M9N0 1113 aa27.07■■□□□ 1.92
SPG21-205ENST00000558339 TBC1D2Q9BYX2 928 aa27.07■■□□□ 1.92
SPG21-205ENST00000558339 DNAJC18Q9H819 358 aa27.07■■□□□ 1.92
SPG21-205ENST00000558339 PI4KBQ9UBF8 816 aa27.07■■□□□ 1.92
SPG21-205ENST00000558339 MAST2Q6P0Q8 1798 aa27.07■■□□□ 1.92
SPG21-205ENST00000558339 ATAD5Q96QE3 1844 aa27.06■■□□□ 1.92
SPG21-205ENST00000558339 SURF6O75683 361 aaKnown RBP27.06■■□□□ 1.92
SPG21-205ENST00000558339 TGFBRAP1Q8WUH2 860 aa27.06■■□□□ 1.92
SPG21-205ENST00000558339 ZNF512BQ96KM6 892 aaPredicted RBP27.06■■□□□ 1.92
SPG21-205ENST00000558339 NOL10Q9BSC4 688 aaKnown RBP27.06■■□□□ 1.92
SPG21-205ENST00000558339 SGPL1O95470 568 aa27.05■■□□□ 1.92
SPG21-205ENST00000558339 BAG3O95817 575 aa27.05■■□□□ 1.92
SPG21-205ENST00000558339 RLBP1P12271 317 aa27.05■■□□□ 1.92
SPG21-205ENST00000558339 ZAP70P43403 619 aa27.05■■□□□ 1.92
SPG21-205ENST00000558339 OS9Q13438 667 aaPredicted RBP27.05■■□□□ 1.92
SPG21-205ENST00000558339 SHROOM1Q2M3G4 852 aaPredicted RBP27.05■■□□□ 1.92
SPG21-205ENST00000558339 METTL16Q86W50 562 aaKnown RBP27.05■■□□□ 1.92
SPG21-205ENST00000558339 MAPKAPK5Q8IW41 473 aa27.05■■□□□ 1.92
SPG21-205ENST00000558339 DPF3Q92784 378 aa27.05■■□□□ 1.92
SPG21-205ENST00000558339 ASCC2Q9H1I8 757 aaPredicted RBP27.05■■□□□ 1.92
SPG21-205ENST00000558339 DHX36Q9H2U1 1008 aaKnown RBP27.05■■□□□ 1.92
SPG21-205ENST00000558339 PIH1D3Q9NQM4 214 aaKnown RBP27.05■■□□□ 1.92
SPG21-205ENST00000558339 TLR7Q9NYK1 1049 aaKnown RBP27.05■■□□□ 1.92
SPG21-205ENST00000558339 DBNLQ9UJU6 430 aaKnown RBP27.05■■□□□ 1.92
SPG21-205ENST00000558339 NOP58Q9Y2X3 529 aaKnown RBP27.05■■□□□ 1.92
SPG21-205ENST00000558339 RANBP2P49792 3224 aaKnown RBP27.05■■□□□ 1.92
SPG21-205ENST00000558339 FLT1P17948 1338 aa27.05■■□□□ 1.92
SPG21-205ENST00000558339 COA7Q96BR5 231 aa27.04■■□□□ 1.92
SPG21-205ENST00000558339 WDR18Q9BV38 432 aa27.04■■□□□ 1.92
SPG21-205ENST00000558339 ZBTB7BO15156 539 aaPredicted RBP27.03■■□□□ 1.92
SPG21-205ENST00000558339 FARP2O94887 1054 aaPredicted RBP27.03■■□□□ 1.92
SPG21-205ENST00000558339 PLCG2P16885 1265 aa27.03■■□□□ 1.92
SPG21-205ENST00000558339 GCLCP48506 637 aaPredicted RBP27.03■■□□□ 1.92
SPG21-205ENST00000558339 TRIOBPQ9H2D6 2365 aa27.02■■□□□ 1.92
SPG21-205ENST00000558339 CHRDL2Q6WN34 429 aa27.02■■□□□ 1.92
SPG21-205ENST00000558339 AS3MTQ9HBK9 375 aa27.02■■□□□ 1.92
SPG21-205ENST00000558339 PAK6Q9NQU5 681 aaPredicted RBP27.02■■□□□ 1.92
SPG21-205ENST00000558339 TAOK2Q9UL54 1235 aa27.02■■□□□ 1.92
SPG21-205ENST00000558339 PALD1Q9ULE6 856 aa27.02■■□□□ 1.92
SPG21-205ENST00000558339 DOCK3Q8IZD9 2030 aa27.02■■□□□ 1.92
SPG21-205ENST00000558339 DYNLL1P63167 89 aaKnown RBP27.01■■□□□ 1.91
SPG21-205ENST00000558339 PABPC4Q13310 644 aaKnown RBP eCLIP27.01■■□□□ 1.91
SPG21-205ENST00000558339 MTMR2Q13614 643 aa27.01■■□□□ 1.91
SPG21-205ENST00000558339 EAF2Q96CJ1 260 aaPredicted RBP27.01■■□□□ 1.91
SPG21-205ENST00000558339 DEFB118Q96PH6 123 aa27.01■■□□□ 1.91
SPG21-205ENST00000558339 HTATIP2Q9BUP3 242 aa27.01■■□□□ 1.91
SPG21-205ENST00000558339 CCDC8Q9H0W5 538 aaPredicted RBP27.01■■□□□ 1.91
SPG21-205ENST00000558339 MYO5AQ9Y4I1 1855 aaKnown RBP27■■□□□ 1.91
SPG21-205ENST00000558339 BACE1P56817 501 aa27■■□□□ 1.91
SPG21-205ENST00000558339 FOXP4Q8IVH2 680 aaPredicted RBP27■■□□□ 1.91
SPG21-205ENST00000558339 ITPRIPQ8IWB1 547 aa27■■□□□ 1.91
SPG21-205ENST00000558339 GJD2Q9UKL4 321 aa27■■□□□ 1.91
SPG21-205ENST00000558339 CDK5RAP2Q96SN8 1893 aa27■■□□□ 1.91
SPG21-205ENST00000558339 GDF11O95390 407 aa26.99■■□□□ 1.91
SPG21-205ENST00000558339 ASNSP08243 561 aa26.99■■□□□ 1.91
SPG21-205ENST00000558339 FTSJ3Q8IY81 847 aaKnown RBP26.99■■□□□ 1.91
SPG21-205ENST00000558339 CRISPLD2Q9H0B8 497 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms