RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 MAPK8P45983 427 aa5.16□□□□□ -1.58
FOXN3-216ENST00000557496 ZNF648Q5T619 568 aaPredicted RBP5.16□□□□□ -1.58
FOXN3-216ENST00000557496 ZBTB37Q5TC79 503 aa5.16□□□□□ -1.58
FOXN3-216ENST00000557496 LLGL2Q6P1M3 1020 aa5.16□□□□□ -1.58
FOXN3-216ENST00000557496 SLC23A3Q6PIS1 610 aa5.16□□□□□ -1.58
FOXN3-216ENST00000557496 C12orf40Q86WS4 652 aa5.16□□□□□ -1.58
FOXN3-216ENST00000557496 LCE1DQ5T752 114 aa5.15□□□□□ -1.59
FOXN3-216ENST00000557496 FLAD1Q8NFF5 587 aa5.15□□□□□ -1.59
FOXN3-216ENST00000557496 TMEM40Q8WWA1 233 aa5.15□□□□□ -1.59
FOXN3-216ENST00000557496 ASB11Q8WXH4 323 aa5.15□□□□□ -1.59
FOXN3-216ENST00000557496 GIPC1O14908 333 aa5.14□□□□□ -1.59
FOXN3-216ENST00000557496 EOMESO95936 686 aa5.14□□□□□ -1.59
FOXN3-216ENST00000557496 CELA3AP09093 270 aa5.14□□□□□ -1.59
FOXN3-216ENST00000557496 LRRC14Q15048 493 aa5.14□□□□□ -1.59
FOXN3-216ENST00000557496 NKPD1Q17RQ9 610 aa5.14□□□□□ -1.59
FOXN3-216ENST00000557496 PCNX4Q63HM2 1172 aa5.14□□□□□ -1.59
FOXN3-216ENST00000557496 ALG1LQ6GMV1 187 aa5.14□□□□□ -1.59
FOXN3-216ENST00000557496 ARMCX6Q7L4S7 300 aa5.14□□□□□ -1.59
FOXN3-216ENST00000557496 ASB16Q96NS5 453 aa5.14□□□□□ -1.59
FOXN3-216ENST00000557496 PRDM7Q9NQW5 492 aa5.14□□□□□ -1.59
FOXN3-216ENST00000557496 PICK1Q9NRD5 415 aa5.14□□□□□ -1.59
FOXN3-216ENST00000557496 PCDHA4Q9UN74 947 aa5.14□□□□□ -1.59
FOXN3-216ENST00000557496 CYP8B1Q9UNU6 501 aa5.14□□□□□ -1.59
FOXN3-216ENST00000557496 MAPK8IP1Q9UQF2 711 aa5.14□□□□□ -1.59
FOXN3-216ENST00000557496 CLCN7P51798 805 aa5.13□□□□□ -1.59
FOXN3-216ENST00000557496 IKZF1Q13422 519 aa5.13□□□□□ -1.59
FOXN3-216ENST00000557496 ZSCAN29Q8IWY8 852 aaPredicted RBP5.13□□□□□ -1.59
FOXN3-216ENST00000557496 KCT2Q8NC54 265 aa5.13□□□□□ -1.59
FOXN3-216ENST00000557496 C12orf49Q9H741 205 aa5.13□□□□□ -1.59
FOXN3-216ENST00000557496 PRDM5Q9NQX1 630 aaPredicted RBP5.13□□□□□ -1.59
FOXN3-216ENST00000557496 WWC3Q9ULE0 1092 aa5.13□□□□□ -1.59
FOXN3-216ENST00000557496 PITPNM2Q9BZ72 1349 aa5.13□□□□□ -1.59
FOXN3-216ENST00000557496 FARP2O94887 1054 aaPredicted RBP5.12□□□□□ -1.59
FOXN3-216ENST00000557496 LRIG2O94898 1065 aa5.12□□□□□ -1.59
FOXN3-216ENST00000557496 ZP2Q05996 745 aa5.12□□□□□ -1.59
FOXN3-216ENST00000557496 INPP5AQ14642 412 aa5.12□□□□□ -1.59
FOXN3-216ENST00000557496 ZNF124Q15973 351 aa5.12□□□□□ -1.59
FOXN3-216ENST00000557496 LRFN4Q6PJG9 635 aa5.12□□□□□ -1.59
FOXN3-216ENST00000557496 CDC37L1Q7L3B6 337 aa5.12□□□□□ -1.59
FOXN3-216ENST00000557496 CYFIP1Q7L576 1253 aa5.12□□□□□ -1.59
FOXN3-216ENST00000557496 GAL3ST3Q96A11 431 aa5.12□□□□□ -1.59
FOXN3-216ENST00000557496 ELMO3Q96BJ8 720 aa5.12□□□□□ -1.59
FOXN3-216ENST00000557496 FOXQ1Q9C009 403 aa5.12□□□□□ -1.59
FOXN3-216ENST00000557496 FBRSQ9HAH7 460 aa5.12□□□□□ -1.59
FOXN3-216ENST00000557496 FAM8A1Q9UBU6 413 aa5.12□□□□□ -1.59
FOXN3-216ENST00000557496 SPG7Q9UQ90 795 aa5.12□□□□□ -1.59
FOXN3-216ENST00000557496 ARID1BQ8NFD5 2236 aaPredicted RBP5.12□□□□□ -1.59
FOXN3-216ENST00000557496 PRAMEF27A3QJZ7 478 aa5.11□□□□□ -1.59
FOXN3-216ENST00000557496 GNAT3A8MTJ3 354 aa5.11□□□□□ -1.59
FOXN3-216ENST00000557496 SLITRK5O94991 958 aa5.11□□□□□ -1.59
FOXN3-216ENST00000557496 USP17L7P0C7H9 530 aa5.11□□□□□ -1.59
FOXN3-216ENST00000557496 ATP2B2Q01814 1243 aa5.11□□□□□ -1.59
FOXN3-216ENST00000557496 PTPN11Q06124 597 aaPredicted RBP5.11□□□□□ -1.59
FOXN3-216ENST00000557496 SLBPQ14493 270 aaKnown RBP eCLIP5.11□□□□□ -1.59
FOXN3-216ENST00000557496 C22orf34Q6ZV56 151 aa5.11□□□□□ -1.59
FOXN3-216ENST00000557496 ERICH6Q7L0X2 663 aa5.11□□□□□ -1.59
FOXN3-216ENST00000557496 ZSWIM9Q86XI8 627 aa5.11□□□□□ -1.59
FOXN3-216ENST00000557496 ZNF507Q8TCN5 953 aa5.11□□□□□ -1.59
FOXN3-216ENST00000557496 PLPPR2Q96GM1 343 aa5.11□□□□□ -1.59
FOXN3-216ENST00000557496 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.11□□□□□ -1.59
FOXN3-216ENST00000557496 CTNND2Q9UQB3 1225 aa5.11□□□□□ -1.59
FOXN3-216ENST00000557496 IVNS1ABPQ9Y6Y0 642 aa5.11□□□□□ -1.59
FOXN3-216ENST00000557496 ZNF503-AS2A6NEH8 195 aa5.1□□□□□ -1.59
FOXN3-216ENST00000557496 DBX1A6NMT0 343 aa5.1□□□□□ -1.59
FOXN3-216ENST00000557496 P4HBP07237 508 aaKnown RBP5.1□□□□□ -1.59
FOXN3-216ENST00000557496 ZNF865P0CJ78 1059 aaPredicted RBP5.1□□□□□ -1.59
FOXN3-216ENST00000557496 CAP2P40123 477 aa5.1□□□□□ -1.59
FOXN3-216ENST00000557496 MESP2Q0VG99 397 aa5.1□□□□□ -1.59
FOXN3-216ENST00000557496 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.1□□□□□ -1.59
FOXN3-216ENST00000557496 SV2BQ7L1I2 683 aa5.1□□□□□ -1.59
FOXN3-216ENST00000557496 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
FOXN3-216ENST00000557496 LMCD1Q9NZU5 365 aa5.1□□□□□ -1.59
FOXN3-216ENST00000557496 CNTNAP4Q9C0A0 1308 aa5.09□□□□□ -1.59
FOXN3-216ENST00000557496 PRR33A8MZF0 331 aa5.09□□□□□ -1.59
FOXN3-216ENST00000557496 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.09□□□□□ -1.59
FOXN3-216ENST00000557496 NKG7Q16617 165 aa5.09□□□□□ -1.59
FOXN3-216ENST00000557496 HDXQ7Z353 690 aa5.09□□□□□ -1.59
FOXN3-216ENST00000557496 KSR1Q8IVT5 923 aa5.09□□□□□ -1.59
FOXN3-216ENST00000557496 MFSD4AQ8N468 514 aa5.09□□□□□ -1.59
FOXN3-216ENST00000557496 WNT10AQ9GZT5 417 aa5.09□□□□□ -1.59
FOXN3-216ENST00000557496 SEMA3GQ9NS98 782 aa5.09□□□□□ -1.59
FOXN3-216ENST00000557496 LRRC10BA6NIK2 292 aa5.08□□□□□ -1.6
FOXN3-216ENST00000557496 CDK8P49336 464 aa5.08□□□□□ -1.6
FOXN3-216ENST00000557496 KCNA1Q09470 495 aa5.08□□□□□ -1.6
FOXN3-216ENST00000557496 PKN1Q16512 942 aa5.08□□□□□ -1.6
FOXN3-216ENST00000557496 KCNMB1Q16558 191 aa5.08□□□□□ -1.6
FOXN3-216ENST00000557496 WIPI1Q5MNZ9 446 aaPredicted RBP5.08□□□□□ -1.6
FOXN3-216ENST00000557496 TTBK2Q6IQ55 1244 aa5.08□□□□□ -1.6
FOXN3-216ENST00000557496 MFSD2AQ8NA29 543 aa5.08□□□□□ -1.6
FOXN3-216ENST00000557496 HSPA12BQ96MM6 686 aa5.08□□□□□ -1.6
FOXN3-216ENST00000557496 MIPEPQ99797 713 aa5.08□□□□□ -1.6
FOXN3-216ENST00000557496 CARS2Q9HA77 564 aaKnown RBP5.08□□□□□ -1.6
FOXN3-216ENST00000557496 ATP13A1Q9HD20 1204 aa5.08□□□□□ -1.6
FOXN3-216ENST00000557496 TTF2Q9UNY4 1162 aaKnown RBP5.08□□□□□ -1.6
FOXN3-216ENST00000557496 SNCAIPQ9Y6H5 919 aa5.08□□□□□ -1.6
FOXN3-216ENST00000557496 CAPN6Q9Y6Q1 641 aa5.08□□□□□ -1.6
FOXN3-216ENST00000557496 FAM155AB1AL88 458 aaPredicted RBP5.07□□□□□ -1.6
FOXN3-216ENST00000557496 LDHBP07195 334 aaKnown RBP5.07□□□□□ -1.6
FOXN3-216ENST00000557496 SFRP5Q5T4F7 317 aa5.07□□□□□ -1.6
FOXN3-216ENST00000557496 FYB2Q5VWT5 728 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms