RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 SMC2O95347 1197 aa26.06■■□□□ 1.76
RCCD1-208ENST00000557266 GSDMDP57764 484 aa26.06■■□□□ 1.76
RCCD1-208ENST00000557266 GJD4Q96KN9 370 aaPredicted RBP26.06■■□□□ 1.76
RCCD1-208ENST00000557266 MTA3Q9BTC8 594 aa26.06■■□□□ 1.76
RCCD1-208ENST00000557266 IMPACTQ9P2X3 320 aa26.06■■□□□ 1.76
RCCD1-208ENST00000557266 PPARAQ07869 468 aa26.06■■□□□ 1.76
RCCD1-208ENST00000557266 RNF41Q9H4P4 317 aaPredicted RBP26.06■■□□□ 1.76
RCCD1-208ENST00000557266 KCNJ14Q9UNX9 436 aa26.06■■□□□ 1.76
RCCD1-208ENST00000557266 IKBKBO14920 756 aa26.05■■□□□ 1.76
RCCD1-208ENST00000557266 TOB1P50616 345 aaPredicted RBP26.05■■□□□ 1.76
RCCD1-208ENST00000557266 PNOCQ13519 176 aa26.05■■□□□ 1.76
RCCD1-208ENST00000557266 DIS3L2Q8IYB7 885 aaKnown RBP26.05■■□□□ 1.76
RCCD1-208ENST00000557266 TRIM22Q8IYM9 498 aa26.05■■□□□ 1.76
RCCD1-208ENST00000557266 CDC5LQ99459 802 aaKnown RBP26.05■■□□□ 1.76
RCCD1-208ENST00000557266 HSD3B7Q9H2F3 369 aa26.05■■□□□ 1.76
RCCD1-208ENST00000557266 COL1A1P02452 1464 aaPredicted RBP26.05■■□□□ 1.76
RCCD1-208ENST00000557266 ERICH2A1L162 156 aa26.05■■□□□ 1.76
RCCD1-208ENST00000557266 WTIPA6NIX2 430 aaPredicted RBP26.05■■□□□ 1.76
RCCD1-208ENST00000557266 C3orf67Q6ZVT6 689 aa26.05■■□□□ 1.76
RCCD1-208ENST00000557266 METTL16Q86W50 562 aaKnown RBP26.05■■□□□ 1.76
RCCD1-208ENST00000557266 CRACR2BQ8N4Y2 399 aaPredicted RBP26.05■■□□□ 1.76
RCCD1-208ENST00000557266 SDR42E1Q8WUS8 393 aa26.05■■□□□ 1.76
RCCD1-208ENST00000557266 GYG1P46976 350 aa26.04■■□□□ 1.76
RCCD1-208ENST00000557266 TPM4P67936 248 aa26.04■■□□□ 1.76
RCCD1-208ENST00000557266 CMTR1Q8N1G2 835 aaKnown RBP26.04■■□□□ 1.76
RCCD1-208ENST00000557266 TRPC5Q9UL62 973 aaPredicted RBP26.04■■□□□ 1.76
RCCD1-208ENST00000557266 LONRF3Q496Y0 759 aa26.03■■□□□ 1.76
RCCD1-208ENST00000557266 ZNF654Q8IZM8 581 aa26.03■■□□□ 1.76
RCCD1-208ENST00000557266 TMTC2Q8N394 836 aa26.03■■□□□ 1.76
RCCD1-208ENST00000557266 CCDC82Q8N4S0 544 aa26.03■■□□□ 1.76
RCCD1-208ENST00000557266 KRI1Q8N9T8 703 aaKnown RBP26.03■■□□□ 1.76
RCCD1-208ENST00000557266 ABCF2Q9UG63 623 aa26.03■■□□□ 1.76
RCCD1-208ENST00000557266 KCNH3Q9ULD8 1083 aa26.03■■□□□ 1.76
RCCD1-208ENST00000557266 SMIM22K7EJ46 135 aa26.03■■□□□ 1.76
RCCD1-208ENST00000557266 RCAN1P53805 252 aa26.03■■□□□ 1.76
RCCD1-208ENST00000557266 SAFBQ15424 915 aaKnown RBP eCLIP26.03■■□□□ 1.76
RCCD1-208ENST00000557266 NYAP1Q6ZVC0 841 aa26.03■■□□□ 1.76
RCCD1-208ENST00000557266 ARID3AQ99856 593 aa26.03■■□□□ 1.76
RCCD1-208ENST00000557266 ZNF652Q9Y2D9 606 aa26.03■■□□□ 1.76
RCCD1-208ENST00000557266 PAXBP1Q9Y5B6 917 aa26.03■■□□□ 1.76
RCCD1-208ENST00000557266 LMOD1P29536 600 aaPredicted RBP26.02■■□□□ 1.76
RCCD1-208ENST00000557266 CEP135Q66GS9 1140 aa26.02■■□□□ 1.76
RCCD1-208ENST00000557266 KRBA2Q6ZNG9 492 aa26.02■■□□□ 1.76
RCCD1-208ENST00000557266 FANCBQ8NB91 859 aa26.02■■□□□ 1.76
RCCD1-208ENST00000557266 FOXP1Q9H334 677 aaPredicted RBP26.02■■□□□ 1.76
RCCD1-208ENST00000557266 RAI14Q9P0K7 980 aa26.02■■□□□ 1.76
RCCD1-208ENST00000557266 ANAPC4Q9UJX5 808 aa26.02■■□□□ 1.76
RCCD1-208ENST00000557266 MAGEB6P1A0A0J9YX57 407 aa26.02■■□□□ 1.76
RCCD1-208ENST00000557266 DEXIO95424 95 aa26.02■■□□□ 1.76
RCCD1-208ENST00000557266 ERFEQ4G0M1 354 aa26.02■■□□□ 1.76
RCCD1-208ENST00000557266 TMC6Q7Z403 805 aa26.02■■□□□ 1.76
RCCD1-208ENST00000557266 NUP133Q8WUM0 1156 aa26.02■■□□□ 1.76
RCCD1-208ENST00000557266 UBAC1Q9BSL1 405 aa26.02■■□□□ 1.76
RCCD1-208ENST00000557266 KCND1Q9NSA2 647 aa26.02■■□□□ 1.76
RCCD1-208ENST00000557266 CCDC196A0A1B0GTZ2 297 aa26.01■■□□□ 1.75
RCCD1-208ENST00000557266 MINDY4BA8MYZ0 360 aa26.01■■□□□ 1.75
RCCD1-208ENST00000557266 ATP1A3P13637 1013 aa26.01■■□□□ 1.75
RCCD1-208ENST00000557266 SEC23AQ15436 765 aa26.01■■□□□ 1.75
RCCD1-208ENST00000557266 ARMCX5Q6P1M9 558 aa26.01■■□□□ 1.75
RCCD1-208ENST00000557266 ANKRD18AQ8IVF6 992 aa26.01■■□□□ 1.75
RCCD1-208ENST00000557266 FOXP4Q8IVH2 680 aaPredicted RBP26.01■■□□□ 1.75
RCCD1-208ENST00000557266 CCAR2Q8N163 923 aaKnown RBP26.01■■□□□ 1.75
RCCD1-208ENST00000557266 ANKRD7Q92527 254 aa26.01■■□□□ 1.75
RCCD1-208ENST00000557266 RIOK1Q9BRS2 568 aaKnown RBP26.01■■□□□ 1.75
RCCD1-208ENST00000557266 KCNQ2O43526 872 aa26■■□□□ 1.75
RCCD1-208ENST00000557266 FANCCQ00597 558 aa26■■□□□ 1.75
RCCD1-208ENST00000557266 CNNM3Q8NE01 707 aa26■■□□□ 1.75
RCCD1-208ENST00000557266 TNKSO95271 1327 aa26■■□□□ 1.75
RCCD1-208ENST00000557266 GRIN1Q05586 938 aa26■■□□□ 1.75
RCCD1-208ENST00000557266 NR5A1Q13285 461 aa26■■□□□ 1.75
RCCD1-208ENST00000557266 SPECC1Q5M775 1068 aa26■■□□□ 1.75
RCCD1-208ENST00000557266 FBXO2Q9UK22 296 aaPredicted RBP26■■□□□ 1.75
RCCD1-208ENST00000557266 RILPL1Q5EBL4 403 aa25.99■■□□□ 1.75
RCCD1-208ENST00000557266 CLEC4GQ6UXB4 293 aa25.99■■□□□ 1.75
RCCD1-208ENST00000557266 CCDC150Q8NCX0 1101 aa25.99■■□□□ 1.75
RCCD1-208ENST00000557266 ESR2Q92731 530 aa25.99■■□□□ 1.75
RCCD1-208ENST00000557266 GNL3LQ9NVN8 582 aaKnown RBP25.99■■□□□ 1.75
RCCD1-208ENST00000557266 TRMT1Q9NXH9 659 aaKnown RBP25.99■■□□□ 1.75
RCCD1-208ENST00000557266 ONECUT3O60422 494 aaPredicted RBP25.99■■□□□ 1.75
RCCD1-208ENST00000557266 PTPREP23469 700 aa25.99■■□□□ 1.75
RCCD1-208ENST00000557266 MYL5Q02045 173 aa25.99■■□□□ 1.75
RCCD1-208ENST00000557266 UBE4AQ14139 1066 aa25.99■■□□□ 1.75
RCCD1-208ENST00000557266 SF3B3Q15393 1217 aaKnown RBP25.99■■□□□ 1.75
RCCD1-208ENST00000557266 CCDC94Q9BW85 323 aaPredicted RBP25.99■■□□□ 1.75
RCCD1-208ENST00000557266 BSDC1Q9NW68 430 aaPredicted RBP25.99■■□□□ 1.75
RCCD1-208ENST00000557266 PCDHA5Q9Y5H7 936 aa25.99■■□□□ 1.75
RCCD1-208ENST00000557266 CACNA1SQ13698 1873 aa25.98■■□□□ 1.75
RCCD1-208ENST00000557266 FOXN1O15353 648 aa25.98■■□□□ 1.75
RCCD1-208ENST00000557266 MDM2Q00987 491 aaPredicted RBP25.98■■□□□ 1.75
RCCD1-208ENST00000557266 PTPN14Q15678 1187 aa25.98■■□□□ 1.75
RCCD1-208ENST00000557266 CCDC112Q8NEF3 446 aa25.98■■□□□ 1.75
RCCD1-208ENST00000557266 OXER1Q8TDS5 423 aa25.98■■□□□ 1.75
RCCD1-208ENST00000557266 A0A1B0GUL6 1792 aa25.98■■□□□ 1.75
RCCD1-208ENST00000557266 ELOA2Q8IYF1 753 aaPredicted RBP25.97■■□□□ 1.75
RCCD1-208ENST00000557266 ZNF592Q92610 1267 aa25.97■■□□□ 1.75
RCCD1-208ENST00000557266 SMARCC1Q92922 1105 aaPredicted RBP25.97■■□□□ 1.75
RCCD1-208ENST00000557266 SHISA4Q96DD7 197 aa25.97■■□□□ 1.75
RCCD1-208ENST00000557266 PCDHB6Q9Y5E3 794 aa25.97■■□□□ 1.75
RCCD1-208ENST00000557266 COL5A3P25940 1745 aaPredicted RBP25.97■■□□□ 1.75
RCCD1-208ENST00000557266 BMP6P22004 513 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms