RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 TBC1D9Q6ZT07 1266 aa13.22□□□□□ -0.29
HNRNPC-230ENST00000557201 PXYLP1Q8TE99 480 aa13.22□□□□□ -0.29
HNRNPC-230ENST00000557201 RNF208Q9H0X6 261 aa13.22□□□□□ -0.29
HNRNPC-230ENST00000557201 AGTPBP1Q9UPW5 1226 aa13.22□□□□□ -0.29
HNRNPC-230ENST00000557201 FAM196BA6NMK8 535 aa13.21□□□□□ -0.29
HNRNPC-230ENST00000557201 ADCY3O60266 1144 aa13.21□□□□□ -0.29
HNRNPC-230ENST00000557201 MCAMP43121 646 aa13.21□□□□□ -0.29
HNRNPC-230ENST00000557201 UBXN2AP68543 259 aa13.21□□□□□ -0.29
HNRNPC-230ENST00000557201 TREML2Q5T2D2 321 aa13.21□□□□□ -0.29
HNRNPC-230ENST00000557201 U2AF1L4Q8WU68 220 aaKnown RBP13.21□□□□□ -0.29
HNRNPC-230ENST00000557201 NEUROD6Q96NK8 337 aa13.21□□□□□ -0.29
HNRNPC-230ENST00000557201 OSBPL5Q9H0X9 879 aaPredicted RBP13.21□□□□□ -0.29
HNRNPC-230ENST00000557201 UNC93B1Q9H1C4 597 aa13.21□□□□□ -0.29
HNRNPC-230ENST00000557201 PRO3102Q9H379 93 aa13.21□□□□□ -0.29
HNRNPC-230ENST00000557201 RCAN3Q9UKA8 241 aa13.21□□□□□ -0.29
HNRNPC-230ENST00000557201 SZT2Q5T011 3432 aa13.21□□□□□ -0.29
HNRNPC-230ENST00000557201 BCAR3O75815 825 aa13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 GNAI2P04899 355 aa13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 LDHCP07864 332 aa13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 GSTO1P78417 241 aa13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 ATF7IPQ6VMQ6 1270 aa13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 PROCA1Q8NCQ7 364 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 LOC285556D6RIA3 1793 aa13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 RANBP2P49792 3224 aaKnown RBP13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 IPO8O15397 1037 aaKnown RBP13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 SGPL1O95470 568 aa13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 ELNP15502 786 aa13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 CAP2P40123 477 aa13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 SPP2Q13103 211 aa13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 FAM110CQ1W6H9 321 aa13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 ANKRD13CQ8N6S4 541 aa13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 ZNF280CQ8ND82 737 aa13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 SMCR8Q8TEV9 937 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 PAK6Q9NQU5 681 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 BIN2Q9UBW5 565 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-230ENST00000557201 SIPA1L1O43166 1804 aa13.19□□□□□ -0.3
HNRNPC-230ENST00000557201 TNPO2O14787 897 aaKnown RBP13.19□□□□□ -0.3
HNRNPC-230ENST00000557201 INHAP05111 366 aa13.19□□□□□ -0.3
HNRNPC-230ENST00000557201 UQCRFS1P1P0C7P4 283 aa13.19□□□□□ -0.3
HNRNPC-230ENST00000557201 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
HNRNPC-230ENST00000557201 METTL16Q86W50 562 aaKnown RBP13.19□□□□□ -0.3
HNRNPC-230ENST00000557201 DPF3Q92784 378 aa13.19□□□□□ -0.3
HNRNPC-230ENST00000557201 TBC1D2Q9BYX2 928 aa13.19□□□□□ -0.3
HNRNPC-230ENST00000557201 CRISPLD2Q9H0B8 497 aa13.19□□□□□ -0.3
HNRNPC-230ENST00000557201 GPR108Q9NPR9 543 aa13.19□□□□□ -0.3
HNRNPC-230ENST00000557201 RAI14Q9P0K7 980 aa13.19□□□□□ -0.3
HNRNPC-230ENST00000557201 RBM27Q9P2N5 1060 aaKnown RBP13.19□□□□□ -0.3
HNRNPC-230ENST00000557201 FARP2O94887 1054 aaPredicted RBP13.18□□□□□ -0.3
HNRNPC-230ENST00000557201 CAPN2P17655 700 aa13.18□□□□□ -0.3
HNRNPC-230ENST00000557201 PPP4CP60510 307 aa13.18□□□□□ -0.3
HNRNPC-230ENST00000557201 G3BP1Q13283 466 aaKnown RBP eCLIP13.18□□□□□ -0.34e-10■□□□□ 8.8
HNRNPC-230ENST00000557201 GORABQ5T7V8 394 aa13.18□□□□□ -0.3
HNRNPC-230ENST00000557201 TEX11Q8IYF3 940 aa13.18□□□□□ -0.3
HNRNPC-230ENST00000557201 SH3RF3Q8TEJ3 882 aaPredicted RBP13.18□□□□□ -0.3
HNRNPC-230ENST00000557201 HTATIP2Q9BUP3 242 aa13.18□□□□□ -0.3
HNRNPC-230ENST00000557201 HERC5Q9UII4 1024 aaKnown RBP13.18□□□□□ -0.3
HNRNPC-230ENST00000557201 GJD2Q9UKL4 321 aa13.18□□□□□ -0.3
HNRNPC-230ENST00000557201 PNMA3Q9UL41 463 aa13.18□□□□□ -0.3
HNRNPC-230ENST00000557201 USP17L5A8MUK1 530 aa13.17□□□□□ -0.3
HNRNPC-230ENST00000557201 ZBTB7BO15156 539 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-230ENST00000557201 GCLCP48506 637 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-230ENST00000557201 HMGCS2P54868 508 aa13.17□□□□□ -0.3
HNRNPC-230ENST00000557201 JAG1P78504 1218 aa13.17□□□□□ -0.3
HNRNPC-230ENST00000557201 ADGRA1Q86SQ6 560 aa13.17□□□□□ -0.3
HNRNPC-230ENST00000557201 SSH3Q8TE77 659 aa13.17□□□□□ -0.3
HNRNPC-230ENST00000557201 WDR18Q9BV38 432 aa13.17□□□□□ -0.3
HNRNPC-230ENST00000557201 ASCC2Q9H1I8 757 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-230ENST00000557201 DNAJC18Q9H819 358 aa13.17□□□□□ -0.3
HNRNPC-230ENST00000557201 PI4KBQ9UBF8 816 aa13.17□□□□□ -0.3
HNRNPC-230ENST00000557201 DOCK3Q8IZD9 2030 aa13.17□□□□□ -0.3
HNRNPC-230ENST00000557201 CEP290O15078 2479 aa13.17□□□□□ -0.3
HNRNPC-230ENST00000557201 ATAD5Q96QE3 1844 aa13.16□□□□□ -0.3
HNRNPC-230ENST00000557201 TNNI3KQ59H18 835 aa13.16□□□□□ -0.3
HNRNPC-230ENST00000557201 TMEM57Q8N5G2 664 aa13.16□□□□□ -0.3
HNRNPC-230ENST00000557201 CLUAP1Q96AJ1 413 aa13.16□□□□□ -0.3
HNRNPC-230ENST00000557201 COA7Q96BR5 231 aa13.16□□□□□ -0.3
HNRNPC-230ENST00000557201 ZNF512BQ96KM6 892 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-230ENST00000557201 DEFB118Q96PH6 123 aa13.16□□□□□ -0.3
HNRNPC-230ENST00000557201 LRP2BPQ9P2M1 347 aa13.16□□□□□ -0.3
HNRNPC-230ENST00000557201 MORF4L1Q9UBU8 362 aa13.16□□□□□ -0.3
HNRNPC-230ENST00000557201 FPGT-TNNI3KV9GXZ4 949 aa13.16□□□□□ -0.3
HNRNPC-230ENST00000557201 TRIOBPQ9H2D6 2365 aa13.15□□□□□ -0.3
HNRNPC-230ENST00000557201 CYP2E1P05181 493 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-230ENST00000557201 HOXA7P31268 230 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-230ENST00000557201 ATP8B2P98198 1209 aa13.15□□□□□ -0.3
HNRNPC-230ENST00000557201 ZKSCAN2Q63HK3 967 aa13.15□□□□□ -0.3
HNRNPC-230ENST00000557201 NAA16Q6N069 864 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-230ENST00000557201 FRAT1Q92837 279 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-230ENST00000557201 DBNDD2Q9BQY9 259 aa13.15□□□□□ -0.3
HNRNPC-230ENST00000557201 DHX36Q9H2U1 1008 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-230ENST00000557201 SNRKQ9NRH2 765 aa13.15□□□□□ -0.3
HNRNPC-230ENST00000557201 AATFQ9NY61 560 aaKnown RBP eCLIP13.15□□□□□ -0.3
HNRNPC-230ENST00000557201 MAST2Q6P0Q8 1798 aa13.15□□□□□ -0.3
HNRNPC-230ENST00000557201 FLT1P17948 1338 aa13.14□□□□□ -0.31
HNRNPC-230ENST00000557201 IGSF3O75054 1194 aa13.14□□□□□ -0.31
HNRNPC-230ENST00000557201 TFRCP02786 760 aaKnown RBP13.14□□□□□ -0.31
HNRNPC-230ENST00000557201 PLCG2P16885 1265 aa13.14□□□□□ -0.31
HNRNPC-230ENST00000557201 BACE1P56817 501 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms