RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 CREB3L3Q68CJ9 461 aa13.39□□□□□ -0.27
FOXN3-212ENST00000556541 C16orf86Q6ZW13 317 aa13.39□□□□□ -0.27
FOXN3-212ENST00000556541 SH3BP5LQ7L8J4 393 aa13.39□□□□□ -0.27
FOXN3-212ENST00000556541 STAG1Q8WVM7 1258 aa13.39□□□□□ -0.27
FOXN3-212ENST00000556541 GINM1Q9NU53 330 aa13.39□□□□□ -0.27
FOXN3-212ENST00000556541 SERPINB13Q9UIV8 391 aa13.39□□□□□ -0.27
FOXN3-212ENST00000556541 DDTLA6NHG4 134 aaPredicted RBP13.38□□□□□ -0.27
FOXN3-212ENST00000556541 UNCXA6NJT0 531 aa13.38□□□□□ -0.27
FOXN3-212ENST00000556541 KIF3CO14782 793 aa13.38□□□□□ -0.27
FOXN3-212ENST00000556541 SLC27A2O14975 620 aa13.38□□□□□ -0.27
FOXN3-212ENST00000556541 POLR3DP05423 398 aaPredicted RBP13.38□□□□□ -0.27
FOXN3-212ENST00000556541 HSPA6P17066 643 aa13.38□□□□□ -0.27
FOXN3-212ENST00000556541 PDE4BQ07343 736 aa13.38□□□□□ -0.27
FOXN3-212ENST00000556541 SUPT20HL1Q3ZLR7 823 aa13.38□□□□□ -0.27
FOXN3-212ENST00000556541 DCAF15Q66K64 600 aa13.38□□□□□ -0.27
FOXN3-212ENST00000556541 KRT26Q7Z3Y9 468 aa13.38□□□□□ -0.27
FOXN3-212ENST00000556541 MTA3Q9BTC8 594 aa13.38□□□□□ -0.27
FOXN3-212ENST00000556541 TM6SF1Q9BZW5 370 aa13.38□□□□□ -0.27
FOXN3-212ENST00000556541 CNNM2Q9H8M5 875 aa13.38□□□□□ -0.27
FOXN3-212ENST00000556541 PALD1Q9ULE6 856 aa13.38□□□□□ -0.27
FOXN3-212ENST00000556541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.38□□□□□ -0.27
FOXN3-212ENST00000556541 ATAD5Q96QE3 1844 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 PLIN4Q96Q06 1357 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 PLCD1P51178 756 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 TCP10Q12799 353 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 EAPPQ56P03 285 aaPredicted RBP13.37□□□□□ -0.27
FOXN3-212ENST00000556541 AKNAD1Q5T1N1 836 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 TATDN1Q6P1N9 297 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 ZFPM1Q8IX07 1006 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 RBM46Q8TBY0 533 aaKnown RBP13.37□□□□□ -0.27
FOXN3-212ENST00000556541 CCDC17Q96LX7 622 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 TBC1D32Q96NH3 1257 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 CSRNP1Q96S65 589 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 TMEM39BQ9GZU3 492 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 NBPF3Q9H094 633 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 DOCK1Q14185 1865 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 WDR19Q8NEZ3 1342 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 SSC5DA1L4H1 1573 aa13.37□□□□□ -0.27
FOXN3-212ENST00000556541 HMGB1P09429 215 aaKnown RBP13.36□□□□□ -0.27
FOXN3-212ENST00000556541 FKBP1BP68106 108 aa13.36□□□□□ -0.27
FOXN3-212ENST00000556541 MAP3K11Q16584 847 aa13.36□□□□□ -0.27
FOXN3-212ENST00000556541 ZSCAN29Q8IWY8 852 aaPredicted RBP13.36□□□□□ -0.27
FOXN3-212ENST00000556541 ZNF526Q8TF50 670 aaPredicted RBP13.36□□□□□ -0.27
FOXN3-212ENST00000556541 C22orf23Q9BZE7 217 aa13.36□□□□□ -0.27
FOXN3-212ENST00000556541 KRT23Q9C075 422 aa13.36□□□□□ -0.27
FOXN3-212ENST00000556541 ZNF112Q9UJU3 913 aa13.36□□□□□ -0.27
FOXN3-212ENST00000556541 OTOFQ9HC10 1997 aa13.35□□□□□ -0.27
FOXN3-212ENST00000556541 MINDY4BA8MYZ0 360 aa13.35□□□□□ -0.27
FOXN3-212ENST00000556541 NF2P35240 595 aa13.35□□□□□ -0.27
FOXN3-212ENST00000556541 MFSD6Q6ZSS7 791 aa13.35□□□□□ -0.27
FOXN3-212ENST00000556541 TBC1D10CQ8IV04 446 aa13.35□□□□□ -0.27
FOXN3-212ENST00000556541 DNAJC18Q9H819 358 aa13.35□□□□□ -0.27
FOXN3-212ENST00000556541 SAP30BPQ9UHR5 308 aaKnown RBP13.35□□□□□ -0.27
FOXN3-212ENST00000556541 SNX14Q9Y5W7 946 aa13.35□□□□□ -0.27
FOXN3-212ENST00000556541 E7EWF7 191 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 TOMM70O94826 608 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 ITGBL1O95965 494 aaPredicted RBP13.34□□□□□ -0.27
FOXN3-212ENST00000556541 POTEIP0CG38 1075 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 POTEJP0CG39 1038 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 CYP2D6P10635 497 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 PSMA5P28066 241 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 SHMT1P34896 483 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 CDK8P49336 464 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 FSTL1Q12841 308 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 PPP4R3BQ5MIZ7 849 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 FBXL16Q8N461 479 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 SMC1BQ8NDV3 1235 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 NCOA7Q8NI08 942 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 CDCA5Q96FF9 252 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 ZNF341Q9BYN7 854 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 TCP11L1Q9NUJ3 509 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 CLEC11AQ9Y240 323 aa13.34□□□□□ -0.27
FOXN3-212ENST00000556541 CYP2D7A0A087X1C5 515 aa13.33□□□□□ -0.28
FOXN3-212ENST00000556541 PHF20L1A8MW92 1017 aa13.33□□□□□ -0.28
FOXN3-212ENST00000556541 ADM5C9JUS6 153 aa13.33□□□□□ -0.28
FOXN3-212ENST00000556541 CAPN15O75808 1086 aa13.33□□□□□ -0.28
FOXN3-212ENST00000556541 RASA1P20936 1047 aa13.33□□□□□ -0.28
FOXN3-212ENST00000556541 NOVP48745 357 aa13.33□□□□□ -0.28
FOXN3-212ENST00000556541 TRDNQ13061 729 aa13.33□□□□□ -0.28
FOXN3-212ENST00000556541 CCDC178Q5BJE1 867 aa13.33□□□□□ -0.28
FOXN3-212ENST00000556541 NOL9Q5SY16 702 aaKnown RBP13.33□□□□□ -0.28
FOXN3-212ENST00000556541 NBPF12Q5TAG4 269 aaPredicted RBP13.33□□□□□ -0.28
FOXN3-212ENST00000556541 USP48Q86UV5 1035 aa13.33□□□□□ -0.28
FOXN3-212ENST00000556541 RASEFQ8IZ41 740 aa13.33□□□□□ -0.28
FOXN3-212ENST00000556541 CRACR2BQ8N4Y2 399 aaPredicted RBP13.33□□□□□ -0.28
FOXN3-212ENST00000556541 ESR2Q92731 530 aa13.33□□□□□ -0.28
FOXN3-212ENST00000556541 TBC1D2Q9BYX2 928 aa13.33□□□□□ -0.28
FOXN3-212ENST00000556541 GLIS2Q9BZE0 524 aaPredicted RBP13.33□□□□□ -0.28
FOXN3-212ENST00000556541 SYNPO2Q9UMS6 1093 aa13.33□□□□□ -0.28
FOXN3-212ENST00000556541 PASKQ96RG2 1323 aa13.33□□□□□ -0.28
FOXN3-212ENST00000556541 PPP1R12BO60237 982 aaPredicted RBP13.32□□□□□ -0.28
FOXN3-212ENST00000556541 CTNND1O60716 968 aaKnown RBP13.32□□□□□ -0.28
FOXN3-212ENST00000556541 HAND2P61296 217 aa13.32□□□□□ -0.28
FOXN3-212ENST00000556541 CTDSPL2Q05D32 466 aa13.32□□□□□ -0.28
FOXN3-212ENST00000556541 PPP4R3CPQ6ZMV5 832 aa13.32□□□□□ -0.28
FOXN3-212ENST00000556541 STOX1Q6ZVD7 989 aa13.32□□□□□ -0.28
FOXN3-212ENST00000556541 MB21D2Q8IYB1 491 aaPredicted RBP13.32□□□□□ -0.28
FOXN3-212ENST00000556541 NEK1Q96PY6 1258 aa13.32□□□□□ -0.28
FOXN3-212ENST00000556541 TRIM34Q9BYJ4 488 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms