RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 KIAA1468Q9P260 1216 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 CLIP2Q9UDT6 1046 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 ANAPC4Q9UJX5 808 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 TNRC6CQ9HCJ0 1690 aaKnown RBP6.25□□□□□ -1.41
GPHN-213ENST00000556501 CCDC88AQ3V6T2 1871 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 PDS5AQ29RF7 1337 aaKnown RBP6.25□□□□□ -1.41
GPHN-213ENST00000556501 CCDC69A6NI79 296 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 FAM177BA6PVY3 158 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 BECN2A8MW95 431 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 SNAP23O00161 211 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 PRKAB2O43741 272 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 NEMFO60524 1076 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 CUTAO60888 179 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 PPP6R2O75170 966 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 WDHD1O75717 1129 aaPredicted RBP6.24□□□□□ -1.41
GPHN-213ENST00000556501 ADAMTS2O95450 1211 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 SLC3A2P08195 630 aaKnown RBP6.24□□□□□ -1.41
GPHN-213ENST00000556501 RXRAP19793 462 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 NLRP12P59046 1061 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 SSRP1Q08945 709 aaKnown RBP6.24□□□□□ -1.41
GPHN-213ENST00000556501 TRIM29Q14134 588 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 UBE4AQ14139 1066 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 HSP90AA2PQ14568 343 aaPredicted RBP6.24□□□□□ -1.41
GPHN-213ENST00000556501 SART3Q15020 963 aaKnown RBP6.24□□□□□ -1.41
GPHN-213ENST00000556501 RTN1Q16799 776 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 CCDC144BQ3MJ40 725 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 DNTTIP2Q5QJE6 756 aaKnown RBP6.24□□□□□ -1.41
GPHN-213ENST00000556501 RESP18Q5W5W9 173 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 SMYD5Q6GMV2 418 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 MFSD6Q6ZSS7 791 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 DRC7Q8IY82 874 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 CCDC144CPQ8IYA2 1237 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 PHKBQ93100 1093 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 MAP7D2Q96T17 732 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 MAP3K14Q99558 947 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 SDF4Q9BRK5 362 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 HPSEQ9Y251 543 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 SLC12A7Q9Y666 1083 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 SLC4A4Q9Y6R1 1079 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 NAV1Q8NEY1 1877 aa6.24□□□□□ -1.41
GPHN-213ENST00000556501 A0A0G2JS52 829 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 MAGEB6P1A0A0J9YX57 407 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 CCDC196A0A1B0GTZ2 297 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 C19orf67A6NJJ6 358 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 ZNF202O95125 648 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 MMP1P03956 469 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 CYP7A1P22680 504 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 RBM6P78332 1123 aaKnown RBP6.23□□□□□ -1.41
GPHN-213ENST00000556501 PPARAQ07869 468 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 LRMPQ12912 555 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 GNL2Q13823 731 aaKnown RBP6.23□□□□□ -1.41
GPHN-213ENST00000556501 WTAPQ15007 396 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 ZRSR1Q15695 479 aaKnown RBP6.23□□□□□ -1.41
GPHN-213ENST00000556501 DPCR1Q3MIW9 517 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 ERFEQ4G0M1 354 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 SLC10A5Q5PT55 438 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 C3orf67Q6ZVT6 689 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 MTERF4Q7Z6M4 381 aaKnown RBP6.23□□□□□ -1.41
GPHN-213ENST00000556501 ANKRD18AQ8IVF6 992 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 NOSTRINQ8IVI9 506 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 TRIM22Q8IYM9 498 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 ZNF654Q8IZM8 581 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 TMTC2Q8N394 836 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 LINC00116Q8NCU8 138 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 CACTINQ8WUQ7 758 aaKnown RBP6.23□□□□□ -1.41
GPHN-213ENST00000556501 RIOK1Q9BRS2 568 aaKnown RBP6.23□□□□□ -1.41
GPHN-213ENST00000556501 MYL10Q9BUA6 226 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.23□□□□□ -1.41
GPHN-213ENST00000556501 BRIP1Q9BX63 1249 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 SLC26A6Q9BXS9 759 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 INCENPQ9NQS7 918 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.23□□□□□ -1.41
GPHN-213ENST00000556501 GNL3LQ9NVN8 582 aaKnown RBP6.23□□□□□ -1.41
GPHN-213ENST00000556501 BSDC1Q9NW68 430 aaPredicted RBP6.23□□□□□ -1.41
GPHN-213ENST00000556501 ZSWIM5Q9P217 1185 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 LRP2BPQ9P2M1 347 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 NRBP1Q9UHY1 535 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 TUBE1Q9UJT0 475 aa6.23□□□□□ -1.41
GPHN-213ENST00000556501 MORC2Q9Y6X9 1032 aaPredicted RBP6.23□□□□□ -1.41
GPHN-213ENST00000556501 DDX60LQ5H9U9 1706 aaKnown RBP6.22□□□□□ -1.41
GPHN-213ENST00000556501 A0A087WWV3 80 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 ERICH2A1L162 156 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 IKBKBO14920 756 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 PPP1R37O75864 691 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 DEXIO95424 95 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 PCP11498 1178 aaKnown RBP6.22□□□□□ -1.41
GPHN-213ENST00000556501 MARCKSP29966 332 aaPredicted RBP6.22□□□□□ -1.41
GPHN-213ENST00000556501 SYKP43405 635 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 GYG1P46976 350 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 GSDMDP57764 484 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 TPM4P67936 248 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 CHAF1AQ13111 956 aaPredicted RBP6.22□□□□□ -1.41
GPHN-213ENST00000556501 DHX8Q14562 1220 aaKnown RBP6.22□□□□□ -1.41
GPHN-213ENST00000556501 PPP2R5BQ15173 497 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 SAFBQ15424 915 aaKnown RBP eCLIP6.22□□□□□ -1.41
GPHN-213ENST00000556501 SEC23AQ15436 765 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 RC3H1Q5TC82 1133 aaKnown RBP6.22□□□□□ -1.41
GPHN-213ENST00000556501 TMED8Q6PL24 325 aaPredicted RBP6.22□□□□□ -1.41
GPHN-213ENST00000556501 SHC4Q6S5L8 630 aa6.22□□□□□ -1.41
GPHN-213ENST00000556501 ADGRA1Q86SQ6 560 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms