RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 GABRQQ9UN88 632 aa20.88■□□□□ 0.93
XRCC3-215ENST00000555964 ARID4AP29374 1257 aaPredicted RBP20.87■□□□□ 0.93
XRCC3-215ENST00000555964 GCLCP48506 637 aaPredicted RBP20.87■□□□□ 0.93
XRCC3-215ENST00000555964 UBE2Q1Q7Z7E8 422 aa20.87■□□□□ 0.93
XRCC3-215ENST00000555964 NSUN4Q96CB9 384 aaKnown RBP20.87■□□□□ 0.93
XRCC3-215ENST00000555964 HERC5Q9UII4 1024 aaKnown RBP20.87■□□□□ 0.93
XRCC3-215ENST00000555964 SGPL1O95470 568 aa20.86■□□□□ 0.93
XRCC3-215ENST00000555964 INHAP05111 366 aa20.86■□□□□ 0.93
XRCC3-215ENST00000555964 PLCG2P16885 1265 aa20.86■□□□□ 0.93
XRCC3-215ENST00000555964 CHRDL2Q6WN34 429 aa20.86■□□□□ 0.93
XRCC3-215ENST00000555964 ANKRD13CQ8N6S4 541 aa20.86■□□□□ 0.93
XRCC3-215ENST00000555964 ZNF280CQ8ND82 737 aa20.86■□□□□ 0.93
XRCC3-215ENST00000555964 UNC93B1Q9H1C4 597 aa20.86■□□□□ 0.93
XRCC3-215ENST00000555964 AS3MTQ9HBK9 375 aa20.86■□□□□ 0.93
XRCC3-215ENST00000555964 TEX11Q8IYF3 940 aa20.85■□□□□ 0.93
XRCC3-215ENST00000555964 DHX36Q9H2U1 1008 aaKnown RBP20.85■□□□□ 0.93
XRCC3-215ENST00000555964 LRP2BPQ9P2M1 347 aa20.85■□□□□ 0.93
XRCC3-215ENST00000555964 CCER2I3L3R5 266 aa20.84■□□□□ 0.93
XRCC3-215ENST00000555964 IGSF3O75054 1194 aa20.84■□□□□ 0.93
XRCC3-215ENST00000555964 BAG3O95817 575 aa20.84■□□□□ 0.93
XRCC3-215ENST00000555964 ATF7IPQ6VMQ6 1270 aa20.84■□□□□ 0.93
XRCC3-215ENST00000555964 TAOK2Q9UL54 1235 aa20.84■□□□□ 0.93
XRCC3-215ENST00000555964 FOCADQ5VW36 1801 aa20.83■□□□□ 0.93
XRCC3-215ENST00000555964 USP17L5A8MUK1 530 aa20.83■□□□□ 0.93
XRCC3-215ENST00000555964 TRIM27P14373 513 aa20.83■□□□□ 0.93
XRCC3-215ENST00000555964 ELNP15502 786 aa20.83■□□□□ 0.93
XRCC3-215ENST00000555964 CAP2P40123 477 aa20.83■□□□□ 0.93
XRCC3-215ENST00000555964 SPP2Q13103 211 aa20.83■□□□□ 0.93
XRCC3-215ENST00000555964 TREML2Q5T2D2 321 aa20.83■□□□□ 0.93
XRCC3-215ENST00000555964 ZNF384Q8TF68 577 aa20.83■□□□□ 0.93
XRCC3-215ENST00000555964 PI4KBQ9UBF8 816 aa20.83■□□□□ 0.93
XRCC3-215ENST00000555964 CDK5RAP2Q96SN8 1893 aa20.82■□□□□ 0.92
XRCC3-215ENST00000555964 TFRCP02786 760 aaKnown RBP20.82■□□□□ 0.92
XRCC3-215ENST00000555964 MCAMP43121 646 aa20.82■□□□□ 0.92
XRCC3-215ENST00000555964 TBC1D9Q6ZT07 1266 aa20.82■□□□□ 0.92
XRCC3-215ENST00000555964 TRIM34Q9BYJ4 488 aa20.82■□□□□ 0.92
XRCC3-215ENST00000555964 FAM196BA6NMK8 535 aa20.81■□□□□ 0.92
XRCC3-215ENST00000555964 HMGCS2P54868 508 aa20.81■□□□□ 0.92
XRCC3-215ENST00000555964 CCDC158Q5M9N0 1113 aa20.81■□□□□ 0.92
XRCC3-215ENST00000555964 TTC39AQ5SRH9 613 aa20.81■□□□□ 0.92
XRCC3-215ENST00000555964 NAA16Q6N069 864 aaPredicted RBP20.81■□□□□ 0.92
XRCC3-215ENST00000555964 PI16Q6UXB8 463 aa20.81■□□□□ 0.92
XRCC3-215ENST00000555964 CCDC84Q86UT8 332 aaPredicted RBP20.81■□□□□ 0.92
XRCC3-215ENST00000555964 DEFB118Q96PH6 123 aa20.81■□□□□ 0.92
XRCC3-215ENST00000555964 GPR108Q9NPR9 543 aa20.81■□□□□ 0.92
XRCC3-215ENST00000555964 PAK6Q9NQU5 681 aaPredicted RBP20.81■□□□□ 0.92
XRCC3-215ENST00000555964 GINM1Q9NU53 330 aa20.81■□□□□ 0.92
XRCC3-215ENST00000555964 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.81■□□□□ 0.92
XRCC3-215ENST00000555964 EVI5O60447 810 aa20.8■□□□□ 0.92
XRCC3-215ENST00000555964 HMGCRP04035 888 aa20.8■□□□□ 0.92
XRCC3-215ENST00000555964 ASNSP08243 561 aa20.8■□□□□ 0.92
XRCC3-215ENST00000555964 SLURP2P0DP57 97 aa20.8■□□□□ 0.92
XRCC3-215ENST00000555964 OS9Q13438 667 aaPredicted RBP20.8■□□□□ 0.92
XRCC3-215ENST00000555964 SH3D19Q5HYK7 790 aa20.8■□□□□ 0.92
XRCC3-215ENST00000555964 FRAT1Q92837 279 aaPredicted RBP20.8■□□□□ 0.92
XRCC3-215ENST00000555964 TMOD4Q9NZQ9 345 aa20.8■□□□□ 0.92
XRCC3-215ENST00000555964 RBM27Q9P2N5 1060 aaKnown RBP20.8■□□□□ 0.92
XRCC3-215ENST00000555964 PNMA6EA0A0J9YXQ4 647 aa20.79■□□□□ 0.92
XRCC3-215ENST00000555964 A0A1W2PPC1 479 aa20.79■□□□□ 0.92
XRCC3-215ENST00000555964 ZBTB7BO15156 539 aaPredicted RBP20.79■□□□□ 0.92
XRCC3-215ENST00000555964 IRX3P78415 501 aaPredicted RBP20.79■□□□□ 0.92
XRCC3-215ENST00000555964 ASCC2Q9H1I8 757 aaPredicted RBP20.79■□□□□ 0.92
XRCC3-215ENST00000555964 SIPA1L1O43166 1804 aa20.78■□□□□ 0.92
XRCC3-215ENST00000555964 CRACR2BQ8N4Y2 399 aaPredicted RBP20.78■□□□□ 0.92
XRCC3-215ENST00000555964 ANKLE1Q8NAG6 615 aa20.78■□□□□ 0.92
XRCC3-215ENST00000555964 SH3RF3Q8TEJ3 882 aaPredicted RBP20.78■□□□□ 0.92
XRCC3-215ENST00000555964 WDR18Q9BV38 432 aa20.78■□□□□ 0.92
XRCC3-215ENST00000555964 CRISPLD2Q9H0B8 497 aa20.78■□□□□ 0.92
XRCC3-215ENST00000555964 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.78■□□□□ 0.92
XRCC3-215ENST00000555964 AATFQ9NY61 560 aaKnown RBP eCLIP20.78■□□□□ 0.92
XRCC3-215ENST00000555964 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.78■□□□□ 0.92
XRCC3-215ENST00000555964 PPP4CP60510 307 aa20.77■□□□□ 0.92
XRCC3-215ENST00000555964 NECAB2Q7Z6G3 386 aa20.77■□□□□ 0.92
XRCC3-215ENST00000555964 CERS3Q8IU89 383 aa20.77■□□□□ 0.92
XRCC3-215ENST00000555964 GTF3C2Q8WUA4 911 aaPredicted RBP20.77■□□□□ 0.92
XRCC3-215ENST00000555964 MYO5AQ9Y4I1 1855 aaKnown RBP20.76■□□□□ 0.91
XRCC3-215ENST00000555964 C19orf81C9J6K1 198 aa20.76■□□□□ 0.91
XRCC3-215ENST00000555964 HLA-DOAP06340 250 aa20.76■□□□□ 0.91
XRCC3-215ENST00000555964 BACE1P56817 501 aa20.76■□□□□ 0.91
XRCC3-215ENST00000555964 TNNI3KQ59H18 835 aa20.76■□□□□ 0.91
XRCC3-215ENST00000555964 ZKSCAN2Q63HK3 967 aa20.76■□□□□ 0.91
XRCC3-215ENST00000555964 FOXP4Q8IVH2 680 aaPredicted RBP20.76■□□□□ 0.91
XRCC3-215ENST00000555964 MORF4L1Q9UBU8 362 aa20.76■□□□□ 0.91
XRCC3-215ENST00000555964 FPGT-TNNI3KV9GXZ4 949 aa20.76■□□□□ 0.91
XRCC3-215ENST00000555964 MYH1P12882 1939 aa20.76■□□□□ 0.91
XRCC3-215ENST00000555964 FLT1P17948 1338 aa20.76■□□□□ 0.91
XRCC3-215ENST00000555964 RPTORQ8N122 1335 aa20.76■□□□□ 0.91
XRCC3-215ENST00000555964 ALPK3Q96L96 1907 aa20.75■□□□□ 0.91
XRCC3-215ENST00000555964 HOXA7P31268 230 aaPredicted RBP20.75■□□□□ 0.91
XRCC3-215ENST00000555964 MTMR2Q13614 643 aa20.75■□□□□ 0.91
XRCC3-215ENST00000555964 TGFBRAP1Q8WUH2 860 aa20.75■□□□□ 0.91
XRCC3-215ENST00000555964 SOCS4Q8WXH5 440 aa20.75■□□□□ 0.91
XRCC3-215ENST00000555964 CLUAP1Q96AJ1 413 aa20.75■□□□□ 0.91
XRCC3-215ENST00000555964 ZNF512BQ96KM6 892 aaPredicted RBP20.75■□□□□ 0.91
XRCC3-215ENST00000555964 HMX1Q9NP08 348 aaPredicted RBP20.75■□□□□ 0.91
XRCC3-215ENST00000555964 POLA2Q14181 598 aa20.74■□□□□ 0.91
XRCC3-215ENST00000555964 METTL16Q86W50 562 aaKnown RBP20.74■□□□□ 0.91
XRCC3-215ENST00000555964 TRMT44Q8IYL2 757 aaKnown RBP20.74■□□□□ 0.91
XRCC3-215ENST00000555964 PRO3102Q9H379 93 aa20.74■□□□□ 0.91
XRCC3-215ENST00000555964 USP17L10C9JJH3 530 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms