RNA–Protein interactions for RNA: ENST00000555801.1

LINC00640-202, long intergenic non-protein coding RNA 640, humanhuman

TSL 3

Gene LINC00640, Length 392 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-202ENST00000555801 NUDT7P0C024 238 aa5.52□□□□□ -1.53
LINC00640-202ENST00000555801 CAPN2P17655 700 aa5.52□□□□□ -1.53
LINC00640-202ENST00000555801 SSTR3P32745 418 aaPredicted RBP5.52□□□□□ -1.53
LINC00640-202ENST00000555801 RBM5P52756 815 aaKnown RBP eCLIP5.52□□□□□ -1.53
LINC00640-202ENST00000555801 RTP1P59025 263 aa5.52□□□□□ -1.53
LINC00640-202ENST00000555801 GTF2IP78347 998 aa5.52□□□□□ -1.53
LINC00640-202ENST00000555801 SNAPC2Q13487 334 aa5.52□□□□□ -1.53
LINC00640-202ENST00000555801 SH3RF1Q7Z6J0 888 aa5.52□□□□□ -1.53
LINC00640-202ENST00000555801 ZKSCAN4Q969J2 545 aaPredicted RBP5.52□□□□□ -1.53
LINC00640-202ENST00000555801 MPHOSPH8Q99549 860 aa5.52□□□□□ -1.53
LINC00640-202ENST00000555801 MYD88Q99836 296 aa5.52□□□□□ -1.53
LINC00640-202ENST00000555801 CIZ1Q9ULV3 898 aaPredicted RBP5.52□□□□□ -1.53
LINC00640-202ENST00000555801 MINPP1Q9UNW1 487 aa5.52□□□□□ -1.53
LINC00640-202ENST00000555801 WDFY4Q6ZS81 3184 aa5.52□□□□□ -1.53
LINC00640-202ENST00000555801 ANKRD36CQ5JPF3 1778 aa5.52□□□□□ -1.53
LINC00640-202ENST00000555801 ZFHX2Q9C0A1 2572 aaPredicted RBP5.52□□□□□ -1.53
LINC00640-202ENST00000555801 LRRC37A2A6NM11 1700 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.51□□□□□ -1.53
LINC00640-202ENST00000555801 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.51□□□□□ -1.53
LINC00640-202ENST00000555801 SPDYE5A6NIY4 337 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 HMGCRP04035 888 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 BCRP11274 1271 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 TNNI2P48788 182 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 CTSWP56202 376 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 NEXNQ0ZGT2 675 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 IRF5Q13568 498 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 GSE1Q14687 1217 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 ACAP1Q15027 740 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 CFAP100Q494V2 611 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 HFE2Q6ZVN8 426 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 MTMR14Q8NCE2 650 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 ZBED3Q96IU2 234 aaPredicted RBP5.51□□□□□ -1.53
LINC00640-202ENST00000555801 PBX4Q9BYU1 374 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 ZCCHC17Q9NP64 241 aaKnown RBP5.51□□□□□ -1.53
LINC00640-202ENST00000555801 SNCAIPQ9Y6H5 919 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 LTBP2Q14767 1821 aa5.51□□□□□ -1.53
LINC00640-202ENST00000555801 UNC79Q9P2D8 2635 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 USP34Q70CQ2 3546 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 MGAMO43451 1857 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 TRIM43BA6NCK2 446 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 RFXAPO00287 272 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 CHL1O00533 1208 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 ERC2O15083 957 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 ZIC2O95409 532 aaPredicted RBP5.5□□□□□ -1.53
LINC00640-202ENST00000555801 CCND3P30281 292 aaPredicted RBP5.5□□□□□ -1.53
LINC00640-202ENST00000555801 TMPOP42166 694 aaKnown RBP5.5□□□□□ -1.53
LINC00640-202ENST00000555801 PDAP1Q13442 181 aaKnown RBP5.5□□□□□ -1.53
LINC00640-202ENST00000555801 NEUROD2Q15784 382 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 DUSP27Q5VZP5 1158 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 KRT40Q6A162 431 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 ZNF804AQ7Z570 1209 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 ANKRD23Q86SG2 305 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 HS6ST3Q8IZP7 471 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 GJD3Q8N144 294 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.5□□□□□ -1.53
LINC00640-202ENST00000555801 TRIB2Q92519 343 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 TRIM43Q96BQ3 446 aaPredicted RBP5.5□□□□□ -1.53
LINC00640-202ENST00000555801 HOOK2Q96ED9 719 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 PRMT6Q96LA8 375 aaPredicted RBP5.5□□□□□ -1.53
LINC00640-202ENST00000555801 KCNH6Q9H252 994 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 NKX2-4Q9H2Z4 354 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 DACH1Q9UI36 760 aa5.5□□□□□ -1.53
LINC00640-202ENST00000555801 KMT2BQ9UMN6 2715 aaPredicted RBP5.49□□□□□ -1.53
LINC00640-202ENST00000555801 ZNF318Q5VUA4 2279 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 DOCK3Q8IZD9 2030 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 TCP10L2B9ZVM9 353 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 CYP2B6P20813 491 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 FKBP1AP62942 108 aaKnown RBP5.49□□□□□ -1.53
LINC00640-202ENST00000555801 CALD1Q05682 793 aaKnown RBP5.49□□□□□ -1.53
LINC00640-202ENST00000555801 KRT24Q2M2I5 525 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 TRIM60Q495X7 471 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 DMRTA1Q5VZB9 504 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 ASCL5Q7RTU5 278 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 ERO1BQ86YB8 467 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 TTLL11Q8NHH1 800 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 COA7Q96BR5 231 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 WRNIP1Q96S55 665 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 PARK7Q99497 189 aaKnown RBP5.49□□□□□ -1.53
LINC00640-202ENST00000555801 METTL22Q9BUU2 404 aaPredicted RBP5.49□□□□□ -1.53
LINC00640-202ENST00000555801 TMEM39BQ9GZU3 492 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 GREM2Q9H772 168 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 CD209Q9NNX6 404 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 TSHZ2Q9NRE2 1034 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 KCNH4Q9UQ05 1017 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 NCOR2Q9Y618 2525 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 XIRP2A4UGR9 3374 aa5.49□□□□□ -1.53
LINC00640-202ENST00000555801 PSME4Q14997 1843 aa5.48□□□□□ -1.53
LINC00640-202ENST00000555801 C5orf42Q9H799 3197 aa5.48□□□□□ -1.53
LINC00640-202ENST00000555801 PLXNA1Q9UIW2 1896 aa5.48□□□□□ -1.53
LINC00640-202ENST00000555801 COL4A6Q14031 1691 aa5.48□□□□□ -1.53
LINC00640-202ENST00000555801 TCF15Q12870 199 aa5.48□□□□□ -1.53
LINC00640-202ENST00000555801 PPIL2Q13356 520 aa5.48□□□□□ -1.53
LINC00640-202ENST00000555801 WDR43Q15061 677 aaKnown RBP eCLIP5.48□□□□□ -1.53
LINC00640-202ENST00000555801 ST3GAL2Q16842 350 aa5.48□□□□□ -1.53
LINC00640-202ENST00000555801 CCDC184Q52MB2 194 aa5.48□□□□□ -1.53
LINC00640-202ENST00000555801 CCDC30Q5VVM6 783 aa5.48□□□□□ -1.53
LINC00640-202ENST00000555801 ANKRD13CQ8N6S4 541 aa5.48□□□□□ -1.53
LINC00640-202ENST00000555801 PDLIM7Q9NR12 457 aa5.48□□□□□ -1.53
LINC00640-202ENST00000555801 TMOD2Q9NZR1 351 aa5.48□□□□□ -1.53
LINC00640-202ENST00000555801 JAG2Q9Y219 1238 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms