RNA–Protein interactions for RNA: ENST00000555619.5

NPC2-207, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPC2, Length 1,035 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-207ENST00000555619 KRT26Q7Z3Y9 468 aa30.66■■■□□ 2.5
NPC2-207ENST00000555619 USP48Q86UV5 1035 aa30.66■■■□□ 2.5
NPC2-207ENST00000555619 FOXP4Q8IVH2 680 aaPredicted RBP30.66■■■□□ 2.5
NPC2-207ENST00000555619 SLC44A5Q8NCS7 719 aa30.66■■■□□ 2.5
NPC2-207ENST00000555619 STAG1Q8WVM7 1258 aa30.66■■■□□ 2.5
NPC2-207ENST00000555619 JAKMIP1Q96N16 626 aaKnown RBP30.66■■■□□ 2.5
NPC2-207ENST00000555619 KIF2CQ99661 725 aa30.66■■■□□ 2.5
NPC2-207ENST00000555619 ADM5C9JUS6 153 aa30.65■■■□□ 2.5
NPC2-207ENST00000555619 PRDM1O75626 825 aa30.65■■■□□ 2.5
NPC2-207ENST00000555619 CRACR2BQ8N4Y2 399 aaPredicted RBP30.65■■■□□ 2.5
NPC2-207ENST00000555619 RNF41Q9H4P4 317 aaPredicted RBP30.65■■■□□ 2.5
NPC2-207ENST00000555619 SERPINB13Q9UIV8 391 aa30.65■■■□□ 2.5
NPC2-207ENST00000555619 COL2A1P02458 1487 aaPredicted RBP30.64■■■□□ 2.5
NPC2-207ENST00000555619 CDK8P49336 464 aa30.64■■■□□ 2.5
NPC2-207ENST00000555619 GABPAQ06546 454 aa30.64■■■□□ 2.5
NPC2-207ENST00000555619 RRP12Q5JTH9 1297 aaKnown RBP30.64■■■□□ 2.5
NPC2-207ENST00000555619 NBPF12Q5TAG4 269 aaPredicted RBP30.64■■■□□ 2.5
NPC2-207ENST00000555619 C16orf86Q6ZW13 317 aa30.64■■■□□ 2.5
NPC2-207ENST00000555619 EHD4Q9H223 541 aa30.64■■■□□ 2.5
NPC2-207ENST00000555619 TOMM22Q9NS69 142 aa30.64■■■□□ 2.5
NPC2-207ENST00000555619 PPP2R3BQ9Y5P8 575 aa30.64■■■□□ 2.5
NPC2-207ENST00000555619 SCN4AP35499 1836 aa30.63■■■□□ 2.49
NPC2-207ENST00000555619 FAM196BA6NMK8 535 aa30.63■■■□□ 2.49
NPC2-207ENST00000555619 PDE4BQ07343 736 aa30.63■■■□□ 2.49
NPC2-207ENST00000555619 IL17RAQ96F46 866 aa30.63■■■□□ 2.49
NPC2-207ENST00000555619 NEK1Q96PY6 1258 aa30.63■■■□□ 2.49
NPC2-207ENST00000555619 TRIM34Q9BYJ4 488 aa30.63■■■□□ 2.49
NPC2-207ENST00000555619 MKNK2Q9HBH9 465 aa30.63■■■□□ 2.49
NPC2-207ENST00000555619 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.63■■■□□ 2.49
NPC2-207ENST00000555619 NEDD4P46934 1319 aa30.63■■■□□ 2.49
NPC2-207ENST00000555619 FGRP09769 529 aa30.62■■■□□ 2.49
NPC2-207ENST00000555619 COL9A3Q14050 684 aaPredicted RBP30.62■■■□□ 2.49
NPC2-207ENST00000555619 MAP1SQ66K74 1059 aaPredicted RBP30.62■■■□□ 2.49
NPC2-207ENST00000555619 MIGA2Q7L4E1 593 aa30.62■■■□□ 2.49
NPC2-207ENST00000555619 NKX2-3Q8TAU0 364 aa30.62■■■□□ 2.49
NPC2-207ENST00000555619 GLIS2Q9BZE0 524 aaPredicted RBP30.62■■■□□ 2.49
NPC2-207ENST00000555619 GPBP1L1Q9HC44 474 aaPredicted RBP30.62■■■□□ 2.49
NPC2-207ENST00000555619 ROBO3Q96MS0 1386 aa30.62■■■□□ 2.49
NPC2-207ENST00000555619 TRDNQ13061 729 aa30.61■■■□□ 2.49
NPC2-207ENST00000555619 METTL16Q86W50 562 aaKnown RBP30.61■■■□□ 2.49
NPC2-207ENST00000555619 LDHDQ86WU2 507 aa30.61■■■□□ 2.49
NPC2-207ENST00000555619 ECM29Q5VYK3 1845 aa30.61■■■□□ 2.49
NPC2-207ENST00000555619 B4E1Z4 1266 aa30.6■■■□□ 2.49
NPC2-207ENST00000555619 ORC4O43929 436 aa30.6■■■□□ 2.49
NPC2-207ENST00000555619 CPA1P15085 419 aa30.6■■■□□ 2.49
NPC2-207ENST00000555619 PSMA5P28066 241 aa30.6■■■□□ 2.49
NPC2-207ENST00000555619 CDC37L1Q7L3B6 337 aa30.6■■■□□ 2.49
NPC2-207ENST00000555619 RALYLQ86SE5 291 aaKnown RBP30.6■■■□□ 2.49
NPC2-207ENST00000555619 NCOA7Q8NI08 942 aa30.6■■■□□ 2.49
NPC2-207ENST00000555619 TM6SF1Q9BZW5 370 aa30.6■■■□□ 2.49
NPC2-207ENST00000555619 KRT23Q9C075 422 aa30.6■■■□□ 2.49
NPC2-207ENST00000555619 DNAJC18Q9H819 358 aa30.6■■■□□ 2.49
NPC2-207ENST00000555619 CNNM2Q9H8M5 875 aa30.6■■■□□ 2.49
NPC2-207ENST00000555619 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.6■■■□□ 2.49
NPC2-207ENST00000555619 TSHZ2Q9NRE2 1034 aa30.6■■■□□ 2.49
NPC2-207ENST00000555619 SWAP70Q9UH65 585 aa30.6■■■□□ 2.49
NPC2-207ENST00000555619 BAZ2AQ9UIF9 1905 aaKnown RBP30.59■■■□□ 2.49
NPC2-207ENST00000555619 NAV1Q8NEY1 1877 aa30.59■■■□□ 2.49
NPC2-207ENST00000555619 CDK5RAP2Q96SN8 1893 aa30.59■■■□□ 2.49
NPC2-207ENST00000555619 PCP11498 1178 aaKnown RBP30.59■■■□□ 2.49
NPC2-207ENST00000555619 CASTP20810 708 aaKnown RBP30.59■■■□□ 2.49
NPC2-207ENST00000555619 ZNF287Q9HBT7 754 aa30.59■■■□□ 2.49
NPC2-207ENST00000555619 SHMT1P34896 483 aa30.58■■■□□ 2.49
NPC2-207ENST00000555619 ZNF444Q8N0Y2 327 aaPredicted RBP30.58■■■□□ 2.49
NPC2-207ENST00000555619 UPF3BQ9BZI7 483 aaKnown RBP30.58■■■□□ 2.49
NPC2-207ENST00000555619 ZSWIM6Q9HCJ5 1215 aa30.58■■■□□ 2.49
NPC2-207ENST00000555619 HERC5Q9UII4 1024 aaKnown RBP30.58■■■□□ 2.49
NPC2-207ENST00000555619 DDX60LQ5H9U9 1706 aaKnown RBP30.57■■■□□ 2.48
NPC2-207ENST00000555619 RANBP6O60518 1105 aaKnown RBP30.57■■■□□ 2.48
NPC2-207ENST00000555619 KDM4AO75164 1064 aa30.57■■■□□ 2.48
NPC2-207ENST00000555619 RASA1P20936 1047 aa30.57■■■□□ 2.48
NPC2-207ENST00000555619 SUPT20HL1Q3ZLR7 823 aa30.57■■■□□ 2.48
NPC2-207ENST00000555619 FAM47AQ5JRC9 791 aa30.57■■■□□ 2.48
NPC2-207ENST00000555619 BLOC1S2Q6QNY1 142 aa30.57■■■□□ 2.48
NPC2-207ENST00000555619 FOCADQ5VW36 1801 aa30.57■■■□□ 2.48
NPC2-207ENST00000555619 TBC1D12O60347 775 aa30.56■■■□□ 2.48
NPC2-207ENST00000555619 YY1P25490 414 aa30.56■■■□□ 2.48
NPC2-207ENST00000555619 MB21D2Q8IYB1 491 aaPredicted RBP30.56■■■□□ 2.48
NPC2-207ENST00000555619 ESR2Q92731 530 aa30.56■■■□□ 2.48
NPC2-207ENST00000555619 CDCA5Q96FF9 252 aa30.56■■■□□ 2.48
NPC2-207ENST00000555619 ZSWIM5Q9P217 1185 aa30.56■■■□□ 2.48
NPC2-207ENST00000555619 TAOK2Q9UL54 1235 aa30.56■■■□□ 2.48
NPC2-207ENST00000555619 CYP46A1Q9Y6A2 500 aa30.56■■■□□ 2.48
NPC2-207ENST00000555619 HMGB1P09429 215 aaKnown RBP30.55■■■□□ 2.48
NPC2-207ENST00000555619 MAP3K10Q02779 954 aa30.55■■■□□ 2.48
NPC2-207ENST00000555619 RABEP1Q15276 862 aa30.55■■■□□ 2.48
NPC2-207ENST00000555619 CYB5R4Q7L1T6 521 aa30.55■■■□□ 2.48
NPC2-207ENST00000555619 CHST3Q7LGC8 479 aa30.55■■■□□ 2.48
NPC2-207ENST00000555619 HOOK2Q96ED9 719 aa30.55■■■□□ 2.48
NPC2-207ENST00000555619 RPS6KB1P23443 525 aa30.54■■■□□ 2.48
NPC2-207ENST00000555619 TFAP4Q01664 338 aa30.54■■■□□ 2.48
NPC2-207ENST00000555619 TATDN1Q6P1N9 297 aa30.54■■■□□ 2.48
NPC2-207ENST00000555619 RUFY3Q7L099 469 aa30.54■■■□□ 2.48
NPC2-207ENST00000555619 DHX32Q7L7V1 743 aaKnown RBP30.54■■■□□ 2.48
NPC2-207ENST00000555619 TCEANC2Q96MN5 208 aa30.54■■■□□ 2.48
NPC2-207ENST00000555619 MYH1P12882 1939 aa30.53■■■□□ 2.48
NPC2-207ENST00000555619 TRAF5O00463 557 aa30.53■■■□□ 2.48
NPC2-207ENST00000555619 NEK4P51957 841 aa30.53■■■□□ 2.48
NPC2-207ENST00000555619 EXOSC10Q01780 885 aaKnown RBP30.53■■■□□ 2.48
NPC2-207ENST00000555619 RRP1BQ14684 758 aaKnown RBP30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms