RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 EXOSC10Q01780 885 aaKnown RBP11.4□□□□□ -0.58
HNRNPC-220ENST00000555585 DLGAP5Q15398 846 aa11.4□□□□□ -0.58
HNRNPC-220ENST00000555585 MKRN1Q9UHC7 482 aaKnown RBP11.4□□□□□ -0.58
HNRNPC-220ENST00000555585 TACC3Q9Y6A5 838 aa11.4□□□□□ -0.58
HNRNPC-220ENST00000555585 SBF1O95248 1867 aa11.4□□□□□ -0.59
HNRNPC-220ENST00000555585 SMIM22K7EJ46 135 aa11.39□□□□□ -0.59
HNRNPC-220ENST00000555585 FZD9O00144 591 aa11.39□□□□□ -0.59
HNRNPC-220ENST00000555585 SOCS7O14512 581 aa11.39□□□□□ -0.59
HNRNPC-220ENST00000555585 KDM4AO75164 1064 aa11.39□□□□□ -0.59
HNRNPC-220ENST00000555585 RPS12P25398 132 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-220ENST00000555585 PDE4BQ07343 736 aa11.39□□□□□ -0.59
HNRNPC-220ENST00000555585 TOB2Q14106 344 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-220ENST00000555585 GPR162Q16538 588 aa11.39□□□□□ -0.59
HNRNPC-220ENST00000555585 C12orf60Q5U649 245 aa11.39□□□□□ -0.59
HNRNPC-220ENST00000555585 CYB5R4Q7L1T6 521 aa11.39□□□□□ -0.59
HNRNPC-220ENST00000555585 BRF1Q92994 677 aa11.39□□□□□ -0.59
HNRNPC-220ENST00000555585 PRMT6Q96LA8 375 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-220ENST00000555585 SLKQ9H2G2 1235 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-220ENST00000555585 TDRD3Q9H7E2 651 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-220ENST00000555585 WDR19Q8NEZ3 1342 aa11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 DDX60LQ5H9U9 1706 aaKnown RBP11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 RANBP6O60518 1105 aaKnown RBP11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 WDHD1O75717 1129 aaPredicted RBP11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 POTEIP0CG38 1075 aa11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 PCP11498 1178 aaKnown RBP11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 GMPSP49915 693 aaPredicted RBP11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 CACNB3P54284 484 aa11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 ANTXR2P58335 489 aa11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 APOBRQ0VD83 1088 aa11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 TTC6Q86TZ1 520 aa11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 ESR2Q92731 530 aa11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 DYNLL2Q96FJ2 89 aa11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 DDX4Q9NQI0 724 aaKnown RBP11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 SH2B1Q9NRF2 756 aaPredicted RBP11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 TMOD2Q9NZR1 351 aa11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 RNF181Q9P0P0 153 aa11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 NAP1L2Q9ULW6 460 aaPredicted RBP11.38□□□□□ -0.59
HNRNPC-220ENST00000555585 ZNF541Q9H0D2 1346 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 ERICH2A1L162 156 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 IFIT3O14879 490 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 ORC4O43929 436 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 PRDM1O75626 825 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 LARGE1O95461 756 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 HLA-DOAP06340 250 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 MMP14P50281 582 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 PLCD1P51178 756 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 TCP10Q12799 353 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 NFIAQ12857 509 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 STK3Q13188 491 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 SART3Q15020 963 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 ME3Q16798 604 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 RBM26Q5T8P6 1007 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 NKX2-3Q8TAU0 364 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 TMEM87BQ96K49 555 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 OSBPL5Q9H0X9 879 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 MKNK2Q9HBH9 465 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 ZSWIM5Q9P217 1185 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 TPCN1Q9ULQ1 816 aa11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.37□□□□□ -0.59
HNRNPC-220ENST00000555585 SHTN1A0MZ66 631 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 CLRN2A0PK11 232 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 MYO1BO43795 1136 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 FGRP09769 529 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 CUL4AQ13619 759 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 TMEM67Q5HYA8 995 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 NFXL1Q6ZNB6 911 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 CCDC83Q8IWF9 413 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 ZSCAN29Q8IWY8 852 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 ZNF444Q8N0Y2 327 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 MTMR14Q8NCE2 650 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 DPF2Q92785 391 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 ZKSCAN3Q9BRR0 538 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 UBAC1Q9BSL1 405 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 IDI2Q9BXS1 227 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 AGXT2Q9BYV1 514 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 ZNF287Q9HBT7 754 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 MYOZ2Q9NPC6 264 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 GPHNQ9NQX3 736 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 ZNF70Q9UC06 446 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 FAM198AQ9UFP1 575 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 CNOT7Q9UIV1 285 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 ROBO3Q96MS0 1386 aa11.36□□□□□ -0.59
HNRNPC-220ENST00000555585 KLF18A0A0U1RQI7 1052 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 TSPY2A6NKD2 308 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 TCP10L2B9ZVM9 353 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 SH2B2O14492 632 aaPredicted RBP11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 ENTPD3O75355 529 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 CDK8P49336 464 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 ZNF280AP59817 542 aaPredicted RBP11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 WTAPQ15007 396 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 FAM47AQ5JRC9 791 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 C9orf131Q5VYM1 1079 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 LHX8Q68G74 356 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 C16orf86Q6ZW13 317 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 IQCA1Q86XH1 822 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 MICALL2Q8IY33 904 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 FBXL16Q8N461 479 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 NECAB1Q8N987 351 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 VEZTQ9HBM0 779 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms