RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 UBXN2AP68543 259 aa16.38■□□□□ 0.21
TUBB3-208ENST00000555576 PROCA1Q8NCQ7 364 aaPredicted RBP16.38■□□□□ 0.21
TUBB3-208ENST00000555576 CCER2I3L3R5 266 aa16.37■□□□□ 0.21
TUBB3-208ENST00000555576 GNAI2P04899 355 aa16.37■□□□□ 0.21
TUBB3-208ENST00000555576 INHAP05111 366 aa16.37■□□□□ 0.21
TUBB3-208ENST00000555576 ELNP15502 786 aa16.37■□□□□ 0.21
TUBB3-208ENST00000555576 GSTO1P78417 241 aa16.37■□□□□ 0.21
TUBB3-208ENST00000555576 FAM110CQ1W6H9 321 aa16.37■□□□□ 0.21
TUBB3-208ENST00000555576 ATF7IPQ6VMQ6 1270 aa16.37■□□□□ 0.21
TUBB3-208ENST00000555576 CHRDL2Q6WN34 429 aa16.37■□□□□ 0.21
TUBB3-208ENST00000555576 ANKRD13CQ8N6S4 541 aa16.37■□□□□ 0.21
TUBB3-208ENST00000555576 SMCR8Q8TEV9 937 aaPredicted RBP16.37■□□□□ 0.21
TUBB3-208ENST00000555576 NEUROD6Q96NK8 337 aa16.37■□□□□ 0.21
TUBB3-208ENST00000555576 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.37■□□□□ 0.21
TUBB3-208ENST00000555576 PAK6Q9NQU5 681 aaPredicted RBP16.37■□□□□ 0.21
TUBB3-208ENST00000555576 PLXNB2O15031 1838 aa16.36■□□□□ 0.21
TUBB3-208ENST00000555576 TNPO2O14787 897 aaKnown RBP16.36■□□□□ 0.21
TUBB3-208ENST00000555576 BCAR3O75815 825 aa16.36■□□□□ 0.21
TUBB3-208ENST00000555576 SGPL1O95470 568 aa16.36■□□□□ 0.21
TUBB3-208ENST00000555576 CAP2P40123 477 aa16.36■□□□□ 0.21
TUBB3-208ENST00000555576 ZNF280CQ8ND82 737 aa16.36■□□□□ 0.21
TUBB3-208ENST00000555576 RBM27Q9P2N5 1060 aaKnown RBP16.36■□□□□ 0.21
TUBB3-208ENST00000555576 ALPK3Q96L96 1907 aa16.36■□□□□ 0.21
TUBB3-208ENST00000555576 MYO5AQ9Y4I1 1855 aaKnown RBP16.35■□□□□ 0.21
TUBB3-208ENST00000555576 FARP2O94887 1054 aaPredicted RBP16.35■□□□□ 0.21
TUBB3-208ENST00000555576 LDHCP07864 332 aa16.35■□□□□ 0.21
TUBB3-208ENST00000555576 SPP2Q13103 211 aa16.35■□□□□ 0.21
TUBB3-208ENST00000555576 POLA2Q14181 598 aa16.35■□□□□ 0.21
TUBB3-208ENST00000555576 SH3D19Q5HYK7 790 aa16.35■□□□□ 0.21
TUBB3-208ENST00000555576 SH3RF3Q8TEJ3 882 aaPredicted RBP16.35■□□□□ 0.21
TUBB3-208ENST00000555576 TBC1D2Q9BYX2 928 aa16.35■□□□□ 0.21
TUBB3-208ENST00000555576 DNAJC18Q9H819 358 aa16.35■□□□□ 0.21
TUBB3-208ENST00000555576 BIN2Q9UBW5 565 aaPredicted RBP16.35■□□□□ 0.21
TUBB3-208ENST00000555576 PNMA3Q9UL41 463 aa16.35■□□□□ 0.21
TUBB3-208ENST00000555576 COL6A3P12111 3177 aa16.35■□□□□ 0.21
TUBB3-208ENST00000555576 HMGCS2P54868 508 aa16.34■□□□□ 0.21
TUBB3-208ENST00000555576 ADGRA1Q86SQ6 560 aa16.34■□□□□ 0.21
TUBB3-208ENST00000555576 METTL16Q86W50 562 aaKnown RBP16.34■□□□□ 0.21
TUBB3-208ENST00000555576 DPF3Q92784 378 aa16.34■□□□□ 0.21
TUBB3-208ENST00000555576 HTATIP2Q9BUP3 242 aa16.34■□□□□ 0.21
TUBB3-208ENST00000555576 CRISPLD2Q9H0B8 497 aa16.34■□□□□ 0.21
TUBB3-208ENST00000555576 RAI14Q9P0K7 980 aa16.34■□□□□ 0.21
TUBB3-208ENST00000555576 HERC5Q9UII4 1024 aaKnown RBP16.34■□□□□ 0.21
TUBB3-208ENST00000555576 IPO8O15397 1037 aaKnown RBP16.33■□□□□ 0.2
TUBB3-208ENST00000555576 UQCRFS1P1P0C7P4 283 aa16.33■□□□□ 0.2
TUBB3-208ENST00000555576 JAG1P78504 1218 aa16.33■□□□□ 0.2
TUBB3-208ENST00000555576 GORABQ5T7V8 394 aa16.33■□□□□ 0.2
TUBB3-208ENST00000555576 TEX11Q8IYF3 940 aa16.33■□□□□ 0.2
TUBB3-208ENST00000555576 GPR108Q9NPR9 543 aa16.33■□□□□ 0.2
TUBB3-208ENST00000555576 USP17L5A8MUK1 530 aa16.32■□□□□ 0.2
TUBB3-208ENST00000555576 ZBTB7BO15156 539 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-208ENST00000555576 CYP2E1P05181 493 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-208ENST00000555576 FLT1P17948 1338 aa16.32■□□□□ 0.2
TUBB3-208ENST00000555576 PPP4CP60510 307 aa16.32■□□□□ 0.2
TUBB3-208ENST00000555576 G3BP1Q13283 466 aaKnown RBP eCLIP16.32■□□□□ 0.24e-6■■□□□ 14.2
TUBB3-208ENST00000555576 SHROOM1Q2M3G4 852 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-208ENST00000555576 TNNI3KQ59H18 835 aa16.32■□□□□ 0.2
TUBB3-208ENST00000555576 TMEM57Q8N5G2 664 aa16.32■□□□□ 0.2
TUBB3-208ENST00000555576 SSH3Q8TE77 659 aa16.32■□□□□ 0.2
TUBB3-208ENST00000555576 CLUAP1Q96AJ1 413 aa16.32■□□□□ 0.2
TUBB3-208ENST00000555576 COA7Q96BR5 231 aa16.32■□□□□ 0.2
TUBB3-208ENST00000555576 DEFB118Q96PH6 123 aa16.32■□□□□ 0.2
TUBB3-208ENST00000555576 DBNDD2Q9BQY9 259 aa16.32■□□□□ 0.2
TUBB3-208ENST00000555576 ASCC2Q9H1I8 757 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-208ENST00000555576 GJD2Q9UKL4 321 aa16.32■□□□□ 0.2
TUBB3-208ENST00000555576 FPGT-TNNI3KV9GXZ4 949 aa16.32■□□□□ 0.2
TUBB3-208ENST00000555576 GCLCP48506 637 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-208ENST00000555576 FRAT1Q92837 279 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-208ENST00000555576 ZNF512BQ96KM6 892 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-208ENST00000555576 WDR18Q9BV38 432 aa16.31■□□□□ 0.2
TUBB3-208ENST00000555576 DHX36Q9H2U1 1008 aaKnown RBP16.31■□□□□ 0.2
TUBB3-208ENST00000555576 AATFQ9NY61 560 aaKnown RBP eCLIP16.31■□□□□ 0.2
TUBB3-208ENST00000555576 LRP2BPQ9P2M1 347 aa16.31■□□□□ 0.2
TUBB3-208ENST00000555576 PI4KBQ9UBF8 816 aa16.31■□□□□ 0.2
TUBB3-208ENST00000555576 MORF4L1Q9UBU8 362 aa16.31■□□□□ 0.2
TUBB3-208ENST00000555576 CAPN2P17655 700 aa16.3■□□□□ 0.2
TUBB3-208ENST00000555576 MTMR2Q13614 643 aa16.3■□□□□ 0.2
TUBB3-208ENST00000555576 NAA16Q6N069 864 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-208ENST00000555576 SNRKQ9NRH2 765 aa16.3■□□□□ 0.2
TUBB3-208ENST00000555576 DDX60LQ5H9U9 1706 aaKnown RBP16.29■□□□□ 0.2
TUBB3-208ENST00000555576 HMGCRP04035 888 aa16.29■□□□□ 0.2
TUBB3-208ENST00000555576 HOXA7P31268 230 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-208ENST00000555576 MNX1P50219 401 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-208ENST00000555576 BACE1P56817 501 aa16.29■□□□□ 0.2
TUBB3-208ENST00000555576 PABPC4Q13310 644 aaKnown RBP eCLIP16.29■□□□□ 0.2
TUBB3-208ENST00000555576 DIS3LQ8TF46 1054 aaKnown RBP16.29■□□□□ 0.2
TUBB3-208ENST00000555576 TGFBRAP1Q8WUH2 860 aa16.29■□□□□ 0.2
TUBB3-208ENST00000555576 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.29■□□□□ 0.28e-7■■■■□ 24.2
TUBB3-208ENST00000555576 AS3MTQ9HBK9 375 aa16.29■□□□□ 0.2
TUBB3-208ENST00000555576 DBNLQ9UJU6 430 aaKnown RBP16.29■□□□□ 0.2
TUBB3-208ENST00000555576 BAG3O95817 575 aa16.28■□□□□ 0.2
TUBB3-208ENST00000555576 ASNSP08243 561 aa16.28■□□□□ 0.2
TUBB3-208ENST00000555576 PLCG2P16885 1265 aa16.28■□□□□ 0.2
TUBB3-208ENST00000555576 ATP8B2P98198 1209 aa16.28■□□□□ 0.2
TUBB3-208ENST00000555576 TRIM32Q13049 653 aa16.28■□□□□ 0.2
TUBB3-208ENST00000555576 TTC39AQ5SRH9 613 aa16.28■□□□□ 0.2
TUBB3-208ENST00000555576 POTEEQ6S8J3 1075 aa16.28■□□□□ 0.2
TUBB3-208ENST00000555576 MAPKAPK5Q8IW41 473 aa16.28■□□□□ 0.2
TUBB3-208ENST00000555576 TXNRD2Q9NNW7 524 aa16.28■□□□□ 0.2
TUBB3-208ENST00000555576 PIH1D3Q9NQM4 214 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms